Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d021255_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:7:147034121:147042045:1 gene:Zm00001d021255 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGCAGATGCAGCCGTCTGCCCTCTTCCTCCTCGTGTTGGCAAGTCTCGCCATCGTCGTA
ACCATGCAGCAGGACAGCAATCCGTTCACATCGGTCGATTGCCAATCCTCGGGGTCGGGG
ACGCCTTCTCCTACCCCCTCGCCGCCGCCGCCGTCGTCGTCCTCCAACAACCTCAACAAC
AGCGCGTTCTGGTCCAACGTCGTCGCGCTACTGGATGCGCTCCCTTCGGCCGCGGCACCC
TCGCGCTTCGCCTCCATCTCCAGCGGCAACGGGGCCATCCGCGCCTTTGTCCGGGGCATC
TGCCGCGGCGATACCTTGCCGGCCGACTGCGCCAAGTACCTCCAGAACGCCACGCTGACC
ATCCAGAGCCGCTGCAACAGAAGCAGCCGCCGCGCCGGCATCTGGTACGACAAGTGCTTC
GTCAGCTACGCCGACACCAACGCGTCGACGTACCAAGAGCAATCATTCCGCTCCATACTC
TACAACACAGGGGAGGTCGGCGACAAAGACGCCTTTGAGACCACCTACTACGCGCTCATG
AGGCAGCTCACCGCCCGCGTCGTCAACGGCTCCGGCACCGCCACCTCGCCGTCGTCGTCC
TCGTCCTCTTTGCGGTCGGTGTCGCCCATGTTCGCTACAGGGGAGGCCGTCTATGATGCT
GCCGCCCCCAACGGCACCATGTACGGGCTGCTCCAGTGCATGAGGGATCGAACGCAAGCG
GAGTGTGAGCAGTGCTTGAAGGACTCGGTTGGGCGGCTGCCAAGCTGCTGTTATGGTCAC
CAGGGCGGGGTGGTGCTCGGCTACAACTGCAATCTGCGCGTGGAGATATACACCTACTAT
GATCTCGCGATAGATGCGCCGCCTCCATCAGGCTCAGGCTTCATCGGGCAAAGTCAAGTG
AAGAAAAGGGTCCATCCGAGGACGACTCTCGCTGTCGCCCTCCCTGTTGGAACAGTGTTT
GCCGCAGCCGCCATCCTTGGAGTTTTCATGCAAAGGAGAAAGGCCAATCGGAAGAAAACA
CCACGACTAGGCAATGACATCAAAGAAGAGAACATCAGTTTTGTTGCGCCGGGCAAACTT
AGTATAGCGGTGTTAAGAACTGCAACAAACAATTTCTCAGAAGAAAACAAACTTGGAGAG
GGAGGTTTTGGTGAAGTGTTCAAGGGTACATTAGAAGACGGGGAAGAGATAGCTGTGAAG
AGACTTTCACATACTTCCTCACAGGGGTTCAACGAGCTTAAGAATGAGCTTGTTCTGGCT
GCCAAATTGAAGCACAGGAACCTGGTTCAGCTCCTTGGCGTGTGCCTCCAAGAAGAGAAG
CTGCTCGCCTATGAATACATGCCCAACAGAAGCCTGGACACCTTCCTTTTCAGTGGCAAT
CCAGCGACGCGGCGGCAACTGGATTGGAGCAAGAGGTTCGGCATCATATGTGGAATCGCG
CGAGGACTCGTGTATCTCCACGAGGAATCCCGGCTGAAGGTTGTCCACAGGGACCTGAAA
CCGAGCAACGTGTTGCTGGATGCGGACATGAACCCCAAGATCTCTGACTTTGGCCTCGCC
AGGGCTTTCAGCAACGACCAGTCTGGAGATATAACAAGACGACCGGTCGGAACCCTTGGG
TATATGTCACCAGAGTATGCCTACTGGGGGAACGTCTCGACCAAGTCAGACATGTTCAGC
TTCGGCGTCATTGTCATCGAGACGGTCACCGGGCGTAGGAACAACAGCCCATACGATCAG
TCTGCAGGATCTGTGTCTGTGCTCAGCCATGTCTGGGACAAGTGGAGAACTGGAGCAACA
ACGGACGTGGTGGATCCAACTTTGGGCGCCGAGCACTACTCAGAAAGCGAGGTCGTCACC
TGCATAGAGGTCGGGCTCCTATGCGTCCAGGAGAATCCGGCGGACCGCCCGGACGCCTCC
GCCGTGGTGCTTATGCTCAGCAGTCCCACCTCCACGCCCGGTGATAGGCGAGTCCCATCC
AGACCGGCCTTTGTCTTCAGCACTGCCTCAGCTTGGAGCTCCGGCGGTGTGCAGATTGGC
AATAATAAACACACATCCACGTCCATGGTTTCAGTTTCAGATAACGAGGTGACAATCACA
GAACTTCAGCCGAGGTAG

Peptide Sequence

PEP ID

Zm00001d021255_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:7:147034121:147042045:1 gene:Zm00001d021255 transcript:Zm00001d021255_T001 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MQMQPSALFLLVLASLAIVVTMQQDSNPFTSVDCQSSGSGTPSPTPSPPPPSSSSNNLNN
SAFWSNVVALLDALPSAAAPSRFASISSGNGAIRAFVRGICRGDTLPADCAKYLQNATLT
IQSRCNRSSRRAGIWYDKCFVSYADTNASTYQEQSFRSILYNTGEVGDKDAFETTYYALM
RQLTARVVNGSGTATSPSSSSSSLRSVSPMFATGEAVYDAAAPNGTMYGLLQCMRDRTQA
ECEQCLKDSVGRLPSCCYGHQGGVVLGYNCNLRVEIYTYYDLAIDAPPPSGSGFIGQSQV
KKRVHPRTTLAVALPVGTVFAAAAILGVFMQRRKANRKKTPRLGNDIKEENISFVAPGKL
SIAVLRTATNNFSEENKLGEGGFGEVFKGTLEDGEEIAVKRLSHTSSQGFNELKNELVLA
AKLKHRNLVQLLGVCLQEEKLLAYEYMPNRSLDTFLFSGNPATRRQLDWSKRFGIICGIA
RGLVYLHEESRLKVVHRDLKPSNVLLDADMNPKISDFGLARAFSNDQSGDITRRPVGTLG
YMSPEYAYWGNVSTKSDMFSFGVIVIETVTGRRNNSPYDQSAGSVSVLSHVWDKWRTGAT
TDVVDPTLGAEHYSESEVVTCIEVGLLCVQENPADRPDASAVVLMLSSPTSTPGDRRVPS
RPAFVFSTASAWSSGGVQIGNNKHTSTSMVSVSDNEVTITELQPR

Transcript Sequence

Transcript ID

Zm00001d021255_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:7:147034121:147042045:1 gene:Zm00001d021255 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGCAGATGCAGCCGTCTGCCCTCTTCCTCCTCGTGTTGGCAAGTCTCGCCATCGTCGTA
ACCATGCAGCAGGACAGCAATCCGTTCACATCGGTCGATTGCCAATCCTCGGGGTCGGGG
ACGCCTTCTCCTACCCCCTCGCCGCCGCCGCCGTCGTCGTCCTCCAACAACCTCAACAAC
AGCGCGTTCTGGTCCAACGTCGTCGCGCTACTGGATGCGCTCCCTTCGGCCGCGGCACCC
TCGCGCTTCGCCTCCATCTCCAGCGGCAACGGGGCCATCCGCGCCTTTGTCCGGGGCATC
TGCCGCGGCGATACCTTGCCGGCCGACTGCGCCAAGTACCTCCAGAACGCCACGCTGACC
ATCCAGAGCCGCTGCAACAGAAGCAGCCGCCGCGCCGGCATCTGGTACGACAAGTGCTTC
GTCAGCTACGCCGACACCAACGCGTCGACGTACCAAGAGCAATCATTCCGCTCCATACTC
TACAACACAGGGGAGGTCGGCGACAAAGACGCCTTTGAGACCACCTACTACGCGCTCATG
AGGCAGCTCACCGCCCGCGTCGTCAACGGCTCCGGCACCGCCACCTCGCCGTCGTCGTCC
TCGTCCTCTTTGCGGTCGGTGTCGCCCATGTTCGCTACAGGGGAGGCCGTCTATGATGCT
GCCGCCCCCAACGGCACCATGTACGGGCTGCTCCAGTGCATGAGGGATCGAACGCAAGCG
GAGTGTGAGCAGTGCTTGAAGGACTCGGTTGGGCGGCTGCCAAGCTGCTGTTATGGTCAC
CAGGGCGGGGTGGTGCTCGGCTACAACTGCAATCTGCGCGTGGAGATATACACCTACTAT
GATCTCGCGATAGATGCGCCGCCTCCATCAGGCTCAGGCTTCATCGGGCAAAGTCAAGTG
AAGAAAAGGGTCCATCCGAGGACGACTCTCGCTGTCGCCCTCCCTGTTGGAACAGTGTTT
GCCGCAGCCGCCATCCTTGGAGTTTTCATGCAAAGGAGAAAGGCCAATCGGAAGAAAACA
CCACGACTAGGCAATGACATCAAAGAAGAGAACATCAGTTTTGTTGCGCCGGGCAAACTT
AGTATAGCGGTGTTAAGAACTGCAACAAACAATTTCTCAGAAGAAAACAAACTTGGAGAG
GGAGGTTTTGGTGAAGTGTTCAAGGGTACATTAGAAGACGGGGAAGAGATAGCTGTGAAG
AGACTTTCACATACTTCCTCACAGGGGTTCAACGAGCTTAAGAATGAGCTTGTTCTGGCT
GCCAAATTGAAGCACAGGAACCTGGTTCAGCTCCTTGGCGTGTGCCTCCAAGAAGAGAAG
CTGCTCGCCTATGAATACATGCCCAACAGAAGCCTGGACACCTTCCTTTTCAGTGGCAAT
CCAGCGACGCGGCGGCAACTGGATTGGAGCAAGAGGTTCGGCATCATATGTGGAATCGCG
CGAGGACTCGTGTATCTCCACGAGGAATCCCGGCTGAAGGTTGTCCACAGGGACCTGAAA
CCGAGCAACGTGTTGCTGGATGCGGACATGAACCCCAAGATCTCTGACTTTGGCCTCGCC
AGGGCTTTCAGCAACGACCAGTCTGGAGATATAACAAGACGACCGGTCGGAACCCTTGGG
TATATGTCACCAGAGTATGCCTACTGGGGGAACGTCTCGACCAAGTCAGACATGTTCAGC
TTCGGCGTCATTGTCATCGAGACGGTCACCGGGCGTAGGAACAACAGCCCATACGATCAG
TCTGCAGGATCTGTGTCTGTGCTCAGCCATGTCTGGGACAAGTGGAGAACTGGAGCAACA
ACGGACGTGGTGGATCCAACTTTGGGCGCCGAGCACTACTCAGAAAGCGAGGTCGTCACC
TGCATAGAGGTCGGGCTCCTATGCGTCCAGGAGAATCCGGCGGACCGCCCGGACGCCTCC
GCCGTGGTGCTTATGCTCAGCAGTCCCACCTCCACGCCCGGTGATAGGCGAGTCCCATCC
AGACCGGCCTTTGTCTTCAGCACTGCCTCAGCTTGGAGCTCCGGCGGTGTGCAGATTGGC
AATAATAAACACACATCCACGTCCATGGTTTCAGTTTCAGATAACGAGGTGACAATCACA
GAACTTCAGCCGAGGTAGCTAAAAAAAATGGACATATATAAGCTTTGAACCGATGGGATG
AAACAGATTGTATTGAAAATTTCTGTCCCTAAAGGCCTTCTCCATTCCATATAGATTGAA
GTAGATTAAGGTGCCGTTCGGTTGTTTGGGATTGGTGGGTCGG