Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d021232_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:7:146619730:146622285:1 gene:Zm00001d021232 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein ROOT PRIMORDIUM DEFECTIVE 1
Sequence	ATGCTCCGCCGCATAGCGGCCCTCCGGCCGCCGTCTCGAGCGGCCGCGCCATTGGGGGCG ATTGCGGCGCCCTATTCCTCGAAGTCCACATCCATCCCTCAGAAGCAGCAGCGCGTCCGA GACCATGCCTTCGACGGCGTCATGGAGGTCCAGAAGCGCGTCCGCCGCTTCCACGCCCTC CACGCTCTCATCCTCTACGCCGCCGCCCCCACCGCGCCCTCCCGCGCCGGCGGAAGCGGC GCCGTGTCCGTCCCCTTCACCCGCCTCGGCGCCCTCGCGCGCCGCCAGTTACGCCTCGCG CCCCTCGACGCTGGCCGCTTTCTCCTGCGCCACGCGCACGCCTTCCACCTCTTCCTCCAC CCCGTCCACCGCATGCTCCACATCCGCCTCACCCCACGCGCTGCAGCGGTGCTCGACGCT GAGGCCGACGCCGTCGCCGCCGCACTCCCCGGCATCTCCGTCCTACGCCTCCGCAAGCTC CTCCTCCTTGCGCCCCCGCACCGCCGTCTCCGCCTCGAGCACATCCACCTCCTCCGCCGC GACCTTGGCTTCCCAGACGATTTCGCCCAGTCTATCATCCAGTCCAACCCCTCCCTCTTC CGCCTCACCCCTGACGGCTTCGTCGAATTCCTGCCGTCCCCCACCGACCCGCCCGATCTC ACCGTCGCCGCCGTAGAGCGCGCCCGGGAGCGCCACTACCGCGAGCACCGCGCGCCCGGC TCCGCCGAGGAGGACGCGCGTTTCGCGTTCCCCATTCGTTTCCCGCCAGGGTTTAAGATC GGCAAGTACTTCCGGATCGCTGTCTGGAAATGGCAGCGCCTCCCCTACGCTTCACCCTAT GCAGACGTCACGGGCCATGACCTGCGTTCGCTTGAGGCACAACGCCGCATGGAAAAGCGC GCGGTCGCTGCTGTCCACGAGTTTCTCTCGCTCACAGTTGAGAAGCGCACCACATTGGAG CGCCTTGCGCTGTTCCGCGATGCACTCGGTGTGCCCAAGAAGATCAAAGAGTTCTTGCTG AAGTACCAGGGTATATTCTACATATCCACGAGGGGGAATCAGGGTAAGCTGCATACGGTG TTCCTCAGGGAGGCGTATTACAAAGGGGAACTTGTTGACCCGAATGCAATACATGATGCA AGACGGAAGCTGGAGGAGTTGCTCATGATCAACCCACAGAGGGCGAATTTGGACAGAATG TTCACCAGCATGGGCCGTGGGTGGGATGAACTTGGTGGCAGCCGCCGTGGTGGATCTGAA CTGAGGGATGAGTTTCTTGGCGATGGAGGTGGCAGGAAAAGGAATGCTGATGCTGATGGG GCTGAGAGTGGGGAGGACTCGGGTGTTGAATCACTGTACATTGATTGA

Peptide Sequence

PEP ID	Zm00001d021232_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:7:146619730:146622285:1 gene:Zm00001d021232 transcript:Zm00001d021232_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein ROOT PRIMORDIUM DEFECTIVE 1
Sequence	MLRRIAALRPPSRAAAPLGAIAAPYSSKSTSIPQKQQRVRDHAFDGVMEVQKRVRRFHAL HALILYAAAPTAPSRAGGSGAVSVPFTRLGALARRQLRLAPLDAGRFLLRHAHAFHLFLH PVHRMLHIRLTPRAAAVLDAEADAVAAALPGISVLRLRKLLLLAPPHRRLRLEHIHLLRR DLGFPDDFAQSIIQSNPSLFRLTPDGFVEFLPSPTDPPDLTVAAVERARERHYREHRAPG SAEEDARFAFPIRFPPGFKIGKYFRIAVWKWQRLPYASPYADVTGHDLRSLEAQRRMEKR AVAAVHEFLSLTVEKRTTLERLALFRDALGVPKKIKEFLLKYQGIFYISTRGNQGKLHTV FLREAYYKGELVDPNAIHDARRKLEELLMINPQRANLDRMFTSMGRGWDELGGSRRGGSE LRDEFLGDGGGRKRNADADGAESGEDSGVESLYID

Transcript Sequence

Transcript ID	Zm00001d021232_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:7:146619730:146622285:1 gene:Zm00001d021232 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein ROOT PRIMORDIUM DEFECTIVE 1
Sequence	CCTCCCCCTTGCAGAATCCCACACAAGTCTCGATGCTCCGCCGCATAGCGGCCCTCCGGC CGCCGTCTCGAGCGGCCGCGCCATTGGGGGCGATTGCGGCGCCCTATTCCTCGAAGTCCA CATCCATCCCTCAGAAGCAGCAGCGCGTCCGAGACCATGCCTTCGACGGCGTCATGGAGG TCCAGAAGCGCGTCCGCCGCTTCCACGCCCTCCACGCTCTCATCCTCTACGCCGCCGCCC CCACCGCGCCCTCCCGCGCCGGCGGAAGCGGCGCCGTGTCCGTCCCCTTCACCCGCCTCG GCGCCCTCGCGCGCCGCCAGTTACGCCTCGCGCCCCTCGACGCTGGCCGCTTTCTCCTGC GCCACGCGCACGCCTTCCACCTCTTCCTCCACCCCGTCCACCGCATGCTCCACATCCGCC TCACCCCACGCGCTGCAGCGGTGCTCGACGCTGAGGCCGACGCCGTCGCCGCCGCACTCC CCGGCATCTCCGTCCTACGCCTCCGCAAGCTCCTCCTCCTTGCGCCCCCGCACCGCCGTC TCCGCCTCGAGCACATCCACCTCCTCCGCCGCGACCTTGGCTTCCCAGACGATTTCGCCC AGTCTATCATCCAGTCCAACCCCTCCCTCTTCCGCCTCACCCCTGACGGCTTCGTCGAAT TCCTGCCGTCCCCCACCGACCCGCCCGATCTCACCGTCGCCGCCGTAGAGCGCGCCCGGG AGCGCCACTACCGCGAGCACCGCGCGCCCGGCTCCGCCGAGGAGGACGCGCGTTTCGCGT TCCCCATTCGTTTCCCGCCAGGGTTTAAGATCGGCAAGTACTTCCGGATCGCTGTCTGGA AATGGCAGCGCCTCCCCTACGCTTCACCCTATGCAGACGTCACGGGCCATGACCTGCGTT CGCTTGAGGCACAACGCCGCATGGAAAAGCGCGCGGTCGCTGCTGTCCACGAGTTTCTCT CGCTCACAGTTGAGAAGCGCACCACATTGGAGCGCCTTGCGCTGTTCCGCGATGCACTCG GTGTGCCCAAGAAGATCAAAGAGTTCTTGCTGAAGTACCAGGGTATATTCTACATATCCA CGAGGGGGAATCAGGGTAAGCTGCATACGGTGTTCCTCAGGGAGGCGTATTACAAAGGGG AACTTGTTGACCCGAATGCAATACATGATGCAAGACGGAAGCTGGAGGAGTTGCTCATGA TCAACCCACAGAGGGCGAATTTGGACAGAATGTTCACCAGCATGGGCCGTGGGTGGGATG AACTTGGTGGCAGCCGCCGTGGTGGATCTGAACTGAGGGATGAGTTTCTTGGCGATGGAG GTGGCAGGAAAAGGAATGCTGATGCTGATGGGGCTGAGAGTGGGGAGGACTCGGGTGTTG AATCACTGTACATTGATTGAGAAATAGAATTATATATGAAGGCTCTGGACATCAACTTGC AAGCTGGTTTGTGAGCAGGCACTCGTTCCCTTTGGAAAAGGTTTAACTTCTTGCATTGGC ATCATCACCACTATAGCATTTCTAGCTAATCGGTCAGCTAGAAAGGTGATGGGCTCAGAA GTCAGAACTGTCAGCAAGGATATCACATTCATGAACCTGCAATGAGTCGATAAGATGGAG ACCAAGGAAAAGTCTAAAGGCCTCCACGTGAGGGCTGGTTCGGTGGATAGAGAAATTGAG GAGATCCATGAGCAGGGATCCTCTTGCTATTTAGGCTTGTTTGGTTATTCCAATTCCATG TGGATTGAAGTGTATTGGAATGTATTGGGTAGATTTTGACTTGCTATGAATTTAAACCGA CTCAATACTATTCAATCCACATGGATTAACGGTGAAATGAACAAGCCCTAGAGGATCTCT CTCCATGGATCTCCTTTATTTTCCTGTTTGGGATCCCTTCTCTATGAACCCCTCCATTTC TCTGTCCACTAAACCAGCCCTGAATGGGAGAAATAGCTTGGGAAGTTTTTGCCTGAACGT TTAGTGTCCAAGGAGGCTGGAAACCACGATATGTTCTGTAAATGCCTAGACCAGTCTCCT GGCATTGGTATGTGAGGCATCATACCTGCAACAACAGTTAGATTGGTATGTGAGGCATCA GACCTGCAACAACAGCTATATTGGTATGTGAGGCATCAGACCTGCAACAACAGCTAGATT GTTATGTGAGGCATCAGACCTGCAACAACAGCTAGATTGTTATGTGAGGCATCAGACCTG CAACAACAGCTAGAAAGGGAACCACATTCTTCATGATGATTATTGCTTCAAGGGTTCTGA AACCTGTTACCTGAAATTTGTTGTTAACAACGCAAACTTCATATTGAGCCTTGCCTTTTG CACAGCCTTTGCCTGAAAAAATCATAGAGTGGATATGCCATTCTTTTTTCAATGTCATCA GAACAGCTCAGTCACTGCACATATAGTGTAAAATCTCATGGTAAGAGCCTTGC