Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d021195_T002
CDS Infomation

cds chromosome:B73_RefGen_v4:7:145558440:145561493:-1 gene:Zm00001d021195 gene_biotype:protein_coding transcript_biotype:protein_coding description:Probable sodium/metabolite cotransporter BASS6 chloroplastic
Sequence

ATGGCCCCTGCCCCCGCTCTCACCGCCACATCCGTCCTGAAGCGTTCCCACCTACCCGGC
GTCCACTCGTTGGCCTGTCGCCGGCAGCCGGGGGCGGACCGCGTCTCGGTGCTTTCTCCA
GCGATCCCGCCGCCCCGCGTTTCATGGCAGCAAGGATCTGGAGTGGTTGCTAAGAGGCTC
CTCTGGGCGAGTGCGAGTGGTTCCTTCGAGAAAGATAACATCGGGGAGGACGCGGTGTTG
CCTTCTCAGATAGCGGTGGAGAATAAAGTAGATTTTTTGAAGATTTTAAAGAGTGCCAAC
TCCATTATTCCCCATATAGTGCTGGGGAGTACAATTCTCGCCCTGGTGTACCCGCCTTCG
TTTACATGGTTCACTACCAGGTATTATGCACCAGCTTTGGGGTTCTTGATGTTTGCTGTT
GGTGTAAACTCAAGTGCCAAGGATTTTATTGAAGCAATAAAGAGGCCAGATGCTATTGCT
GCGGGCTATATCGGACAGTTTGTCATCAAGCCTTTGTTTGGATTCCTTTTTGGCACTCTT
GCGGTTGCAGTTCTTAACCTCCCAGCTGCTCTAGGCGCTGGCATAATGTTGGTTTCATGC
GTGAGCGGAGCACAACTTTCAAACTATGCAACTTTCTTGACGGATCCACATATGGCTCCT
CTCAGCATTGTTATGACATCATTGTCAACAGCTACTGCAGTTTTTGTCACCCCAACATTA
TCTTACTTTCTTATTGGCCAGAAATTACCTGTAGATGTCAAAGGGATGATGTCCAGCATC
GTTCAAATAGTTGTTGCTCCAATTGCTGCCGGATTGCTTCTGAATAGATTCCTACCAAGG
CTCTGTGCAGCTATTCAGCCATTTCTCCCTTCGATGTCGGTGTTTGTCACTGCCCTGTGT
GTTGGCTCACCATTGGCAATAAATATCAAGGCTGTTTTGTCGCCATTTGGATTAACCATA
GTGCTGCTCCTTTTTGCATTCCACACCTCATCTTTTGTAGCTGGTTATCATCTTGCTGGT
ACTTGGTTTCGCAAGTCAGACGACGTAAAGGCACTACAAAGGACAATATCTTTTGAGACA
GGAATGCAAAGCAGCCTTCTTGCTCTTGCTTTAGCAAATAAGTTCTTCCCAGATCCACTA
GTGGGTGTGCCTCCAGCCATATCGGTTGTGTTGATGTCCTTAATGGGATTTGCTCTTGTC
ATGGTATGGTCCAAGAAAAGAGAAGCCTAA

Peptide Sequence

PEP ID

Zm00001d021195_P002
PEP Infomation

pep chromosome:B73_RefGen_v4:7:145558440:145561493:-1 gene:Zm00001d021195 transcript:Zm00001d021195_T002 gene_biotype:protein_coding transcript_biotype:protein_coding description:Probable sodium/metabolite cotransporter BASS6 chloroplastic
Sequence

MAPAPALTATSVLKRSHLPGVHSLACRRQPGADRVSVLSPAIPPPRVSWQQGSGVVAKRL
LWASASGSFEKDNIGEDAVLPSQIAVENKVDFLKILKSANSIIPHIVLGSTILALVYPPS
FTWFTTRYYAPALGFLMFAVGVNSSAKDFIEAIKRPDAIAAGYIGQFVIKPLFGFLFGTL
AVAVLNLPAALGAGIMLVSCVSGAQLSNYATFLTDPHMAPLSIVMTSLSTATAVFVTPTL
SYFLIGQKLPVDVKGMMSSIVQIVVAPIAAGLLLNRFLPRLCAAIQPFLPSMSVFVTALC
VGSPLAINIKAVLSPFGLTIVLLLFAFHTSSFVAGYHLAGTWFRKSDDVKALQRTISFET
GMQSSLLALALANKFFPDPLVGVPPAISVVLMSLMGFALVMVWSKKREA

Transcript Sequence

Transcript ID

Zm00001d021195_T002
Transcript Infomation

cdna chromosome:B73_RefGen_v4:7:145558440:145561493:-1 gene:Zm00001d021195 gene_biotype:protein_coding transcript_biotype:protein_coding description:Probable sodium/metabolite cotransporter BASS6 chloroplastic
Sequence

GTCCCTGTCCGTCGGTTCAAGCTTCCCAACAATCTCTGCGGAGTAGGTCGCCTGACGAAC
TACCGAGACGTGCGTCTCGCTTCTCCCTTCCTCAGCTGCTGGCCCGCTGCCTGCAGCCAT
TGCCCGCTCCTCGAGGTCAAATGGCCCCTGCCCCCGCTCTCACCGCCACATCCGTCCTGA
AGCGTTCCCACCTACCCGGCGTCCACTCGTTGGCCTGTCGCCGGCAGCCGGGGGCGGACC
GCGTCTCGGTGCTTTCTCCAGCGATCCCGCCGCCCCGCGTTTCATGGCAGCAAGGATCTG
GAGTGGTTGCTAAGAGGCTCCTCTGGGCGAGTGCGAGTGGTTCCTTCGAGAAAGATAACA
TCGGGGAGGACGCGGTGTTGCCTTCTCAGATAGCGGTGGAGAATAAAGTAGATTTTTTGA
AGATTTTAAAGAGTGCCAACTCCATTATTCCCCATATAGTGCTGGGGAGTACAATTCTCG
CCCTGGTGTACCCGCCTTCGTTTACATGGTTCACTACCAGGTATTATGCACCAGCTTTGG
GGTTCTTGATGTTTGCTGTTGGTGTAAACTCAAGTGCCAAGGATTTTATTGAAGCAATAA
AGAGGCCAGATGCTATTGCTGCGGGCTATATCGGACAGTTTGTCATCAAGCCTTTGTTTG
GATTCCTTTTTGGCACTCTTGCGGTTGCAGTTCTTAACCTCCCAGCTGCTCTAGGCGCTG
GCATAATGTTGGTTTCATGCGTGAGCGGAGCACAACTTTCAAACTATGCAACTTTCTTGA
CGGATCCACATATGGCTCCTCTCAGCATTGTTATGACATCATTGTCAACAGCTACTGCAG
TTTTTGTCACCCCAACATTATCTTACTTTCTTATTGGCCAGAAATTACCTGTAGATGTCA
AAGGGATGATGTCCAGCATCGTTCAAATAGTTGTTGCTCCAATTGCTGCCGGATTGCTTC
TGAATAGATTCCTACCAAGGCTCTGTGCAGCTATTCAGCCATTTCTCCCTTCGATGTCGG
TGTTTGTCACTGCCCTGTGTGTTGGCTCACCATTGGCAATAAATATCAAGGCTGTTTTGT
CGCCATTTGGATTAACCATAGTGCTGCTCCTTTTTGCATTCCACACCTCATCTTTTGTAG
CTGGTTATCATCTTGCTGGTACTTGGTTTCGCAAGTCAGACGACGTAAAGGCACTACAAA
GGACAATATCTTTTGAGACAGGAATGCAAAGCAGCCTTCTTGCTCTTGCTTTAGCAAATA
AGTTCTTCCCAGATCCACTAGTGGGTGTGCCTCCAGCCATATCGGTTGTGTTGATGTCCT
TAATGGGATTTGCTCTTGTCATGGTATGGTCCAAGAAAAGAGAAGCCTAATTTCCTTAAT
CAATTATGCGCTGCGCTGTTGTTTTCTGCTCTTATTTATGTAGAGTAGGTAGAATTTTTC
ATGCTTCAAATTTGAAACTCTTGTAGCGTTCCTTCTCTCCATCTGAGTGAGCTTGCAAGT
GCTTTCTTTCTCTCTCACTCACTCACTAAATTATTTTCCAGATTTACATTTTTTTTT