Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d021188_T011
CDS Infomation	cds chromosome:B73_RefGen_v4:7:145411810:145418461:1 gene:Zm00001d021188 gene_biotype:protein_coding transcript_biotype:protein_coding description:Flowering time control protein FPA
Sequence	ATGTCGTCGGAGCCTCTACCCGCGGAGTCACCCGAGGCGCCCGCTTCCGCCTCTGGCTCC CCTTCGAAGGACGCCGTCGGCACTGAGGTCGGCGCCGCTGCGGGGTCCCCGGAAACGAAC ACGCTCTGGGTGGGCAACCTGCCCTCGCACGTGACCGAGGGCGATTTGTTGGCGCTGTTT GGGCCGCACGGCGCGCTCGATTGCGCCCTTGCACGAGCCGGATCTCGCAGCTACGCGTTC GTCCTCTTCCGTTCCCCAGCCGAGGCTCGCGAAGCCGTCGAGGCCACCCGGGGTGAAAAG GTCAAGGGGGCCGCCATGCGCACCGAGTTCGCGCGGCCGGCTAGAGCTGTTAGAAATCTG TGGGTTGGTGGCATTAGCCCATCGATTTCAAAGGAGGAGCTTGAGGGGGAGTTTCTGAAG TTCGGAAAAGTTGAAGGTGTTGCATTCTCCCAAGATCAGACTTCAGCATACATAGATTTT GAGAAGCTTGAAGACGCAATTTCTGCTCACAGATCCTTGAATGGAAAAATGCTAGGTGGC AAGGAATTGTGTGTTGATTTCCAGAGGTCCAAGGGAAGAGCGGAATGGTCAGAAGCTAGC AGCTTCAATGGTAGAGTACCAGGGCCAGTGGGTGATAAGAGAGGCAGTGGCCCTCTGAAG AGTTCTGCTGGAGTGCGGATGCGAGAGGCACAGCCTACCAATGTTCTCTGGGTTGGTTTT CCAGGTTCTTATAGAGTCATTGATGAGGAGGCACTTAAGCATGCCATGTCAGTATTCGGT GTCGTTACGAAGATAAAAGTTTTCCAGACAAGGCAGTATGCTTTTGTTGAGTTTGCAAAT GTTGCGGAAGCTTGTAATGCTAAGATGAATCTAGATGGTCATCTTTTCAATGATCCCAGG ATTCAGATTCTTTTCTCAAACAGTGGGCTTGCACCAAACAAATTGGACAACCCAACATCG GTTGCTGGATTTCCTAGTTCAGAAATCTATTCCAGTGATGGTCGTCTAGGCCCTGGTATT GGCAGTGGAACTTTGCAAGGGTATGATCCACCAAGAGGAGGAAGAACAAGATATTACGAT TATGCGGGTATGCCTACTCCAGGTGGTATCCTTTCACAACCTGAACCATTTGATCCAAGA GAAGCAAAAAGAATGAGGCTTGCTGCTGGTGCTGACCCTTACGATGTAAGGGCAGGCAGC ACAGGTCTTTATTCTGCTGGATACCGTCATCAGGGCAGTTCTGTGCACGCTGAGGGAAGC TCAAGTCCTGTTATTCGAGTCCGGGGCACAGTGCATCGTACATCATACATTGAGCACTGT TGGCGTGGCAGTATTGCCAAAGGTGGATCCCCTGTTTGTCGTGCTCGTTGTTTGCCTATA ACAAAGGGCAGTGACATACCTTTACCGGATGTTATGAATTGCTCAGCTCGGACTGGATTG GATATGCTGGCGAAGCACTACGCAGATGCCACTGGATTTGACATTGTCTTTTTCTTGCCA GATAGTGAAGATGACTTTGTTTCTTATACTGAGTTCTTGCGTTACCTGGGCTCAAAAAGT CGGGCAGGGGTTGTAAAAGTTGATGCAGGGACTACATTATTTTTGGTTCCACCATCAGAT TTCCTAACAAATGTGTTACAAGTTGATGGTCCAGAGCGCCTTTATGGTGTGGTATTACAC ATTCCACAAATCTCTGCTGCTGCTGCACTGAGGCCACAGTTAACTGGGACCGAACAACAA CCTTACTATGATGAAAGGGGAACTCTGCCTACTTCACAAAGAAAGTATAGTATCATTTCT CCTAATGACAGTGGCCACCTTGATGCTGATTATCGGACATCTTTGCATGAGGATTCAATG CATCGGTTGGGGCATATTCCTGGAAGGCCTCGGGTGGATGAAGGACAAGCAGTTCAACCA GCTCTTGCAGGTTTTCCTGCTAATCAAGCAGCTGGGCTGCAAGTACAATCTTCACTCAAG CCTGACATTATGGCTACATTAGCAAAACTTCTGCCTAGTGTGCAATCGTCACCGCTGGTA AGTGGTCAGATGAATGCCATAGACAGAACATCGCAGATACAGGATCCATCCATGCTTTCA AAAGTATGGAATCCTGAAAACCAAGTTACTGCTTCAAATTCATCCTTTGGGCAAATGGCT AATGTTCAGCATCCAGGACAGCAGTTTAGTGGCCAAGCTTCAGCTGCTCATTTGACAAAC TATGGGAACATGGTGAGTGCTCAGGAGCGCTCAATACAACATACTGCTTACAACCCTGAA GTTACTTTGAACTTGCCACCACCACCTCCACTTCCAACAATACCACACAGTTCTGCTACA TTACAGTCTCAAGGTGGCCACAGTTTGCCCTCACAGACAAACCAGCAACTGTATCAGCCA GAGCAGTATTATGTGCCCCAAAACAACTATGGTCCATTAGTTCCAGTTAGCCATTCTAAC CTTCAAATCAGCAACACTAACAACCCCACCCTTACCATCCCACAAGTGAACCCTGGACCT CCAACAAATAATCAGATTGGGAATTTGGCCCAGCCACAGCATTCTATGCCACTGCATGTT GATAGAGCAAGTCAGGATTTCTCTTCTCAGGGGCAACAACAAAATCGTGGTCCTGGTGCT GCACAAGCTCCCGAGGAGGATAAAAGCAAGAAGTACCAGGCGACACTCCAGTTAGCTCAA AACCTACTGCTTCAGTTACAGCAGCGTGGATCTGGAAATCAATCCTGA

Peptide Sequence

PEP ID	Zm00001d021188_P011
PEP Infomation	pep chromosome:B73_RefGen_v4:7:145411810:145418461:1 gene:Zm00001d021188 transcript:Zm00001d021188_T011 gene_biotype:protein_coding transcript_biotype:protein_coding description:Flowering time control protein FPA
Sequence	MSSEPLPAESPEAPASASGSPSKDAVGTEVGAAAGSPETNTLWVGNLPSHVTEGDLLALF GPHGALDCALARAGSRSYAFVLFRSPAEAREAVEATRGEKVKGAAMRTEFARPARAVRNL WVGGISPSISKEELEGEFLKFGKVEGVAFSQDQTSAYIDFEKLEDAISAHRSLNGKMLGG KELCVDFQRSKGRAEWSEASSFNGRVPGPVGDKRGSGPLKSSAGVRMREAQPTNVLWVGF PGSYRVIDEEALKHAMSVFGVVTKIKVFQTRQYAFVEFANVAEACNAKMNLDGHLFNDPR IQILFSNSGLAPNKLDNPTSVAGFPSSEIYSSDGRLGPGIGSGTLQGYDPPRGGRTRYYD YAGMPTPGGILSQPEPFDPREAKRMRLAAGADPYDVRAGSTGLYSAGYRHQGSSVHAEGS SSPVIRVRGTVHRTSYIEHCWRGSIAKGGSPVCRARCLPITKGSDIPLPDVMNCSARTGL DMLAKHYADATGFDIVFFLPDSEDDFVSYTEFLRYLGSKSRAGVVKVDAGTTLFLVPPSD FLTNVLQVDGPERLYGVVLHIPQISAAAALRPQLTGTEQQPYYDERGTLPTSQRKYSIIS PNDSGHLDADYRTSLHEDSMHRLGHIPGRPRVDEGQAVQPALAGFPANQAAGLQVQSSLK PDIMATLAKLLPSVQSSPLVSGQMNAIDRTSQIQDPSMLSKVWNPENQVTASNSSFGQMA NVQHPGQQFSGQASAAHLTNYGNMVSAQERSIQHTAYNPEVTLNLPPPPPLPTIPHSSAT LQSQGGHSLPSQTNQQLYQPEQYYVPQNNYGPLVPVSHSNLQISNTNNPTLTIPQVNPGP PTNNQIGNLAQPQHSMPLHVDRASQDFSSQGQQQNRGPGAAQAPEEDKSKKYQATLQLAQ NLLLQLQQRGSGNQS

Transcript Sequence

Transcript ID	Zm00001d021188_T011
Transcript Infomation	cdna chromosome:B73_RefGen_v4:7:145411810:145418461:1 gene:Zm00001d021188 gene_biotype:protein_coding transcript_biotype:protein_coding description:Flowering time control protein FPA
Sequence	GCGTCCGAACCAGATTCCCCGTCCCCTCTAGGGTTACGCCCACTCTCCCCCGCCGCTCCG GCGATGTCGTCGGAGCCTCTACCCGCGGAGTCACCCGAGGCGCCCGCTTCCGCCTCTGGC TCCCCTTCGAAGGACGCCGTCGGCACTGAGGTCGGCGCCGCTGCGGGGTCCCCGGAAACG AACACGCTCTGGGTGGGCAACCTGCCCTCGCACGTGACCGAGGGCGATTTGTTGGCGCTG TTTGGGCCGCACGGCGCGCTCGATTGCGCCCTTGCACGAGCCGGATCTCGCAGCTACGCG TTCGTCCTCTTCCGTTCCCCAGCCGAGGCTCGCGAAGCCGTCGAGGCCACCCGGGGTGAA AAGGTCAAGGGGGCCGCCATGCGCACCGAGTTCGCGCGGCCGGCTAGAGCTGTTAGAAAT CTGTGGGTTGGTGGCATTAGCCCATCGATTTCAAAGGAGGAGCTTGAGGGGGAGTTTCTG AAGTTCGGAAAAGTTGAAGGTGTTGCATTCTCCCAAGATCAGACTTCAGCATACATAGAT TTTGAGAAGCTTGAAGACGCAATTTCTGCTCACAGATCCTTGAATGGAAAAATGCTAGGT GGCAAGGAATTGTGTGTTGATTTCCAGAGGTCCAAGGGAAGAGCGGAATGGTCAGAAGCT AGCAGCTTCAATGGTAGAGTACCAGGGCCAGTGGGTGATAAGAGAGGCAGTGGCCCTCTG AAGAGTTCTGCTGGAGTGCGGATGCGAGAGGCACAGCCTACCAATGTTCTCTGGGTTGGT TTTCCAGGTTCTTATAGAGTCATTGATGAGGAGGCACTTAAGCATGCCATGTCAGTATTC GGTGTCGTTACGAAGATAAAAGTTTTCCAGACAAGGCAGTATGCTTTTGTTGAGTTTGCA AATGTTGCGGAAGCTTGTAATGCTAAGATGAATCTAGATGGTCATCTTTTCAATGATCCC AGGATTCAGATTCTTTTCTCAAACAGTGGGCTTGCACCAAACAAATTGGACAACCCAACA TCGGTTGCTGGATTTCCTAGTTCAGAAATCTATTCCAGTGATGGTCGTCTAGGCCCTGGT ATTGGCAGTGGAACTTTGCAAGGGTATGATCCACCAAGAGGAGGAAGAACAAGATATTAC GATTATGCGGGTATGCCTACTCCAGGTGGTATCCTTTCACAACCTGAACCATTTGATCCA AGAGAAGCAAAAAGAATGAGGCTTGCTGCTGGTGCTGACCCTTACGATGTAAGGGCAGGC AGCACAGGTCTTTATTCTGCTGGATACCGTCATCAGGGCAGTTCTGTGCACGCTGAGGGA AGCTCAAGTCCTGTTATTCGAGTCCGGGGCACAGTGCATCGTACATCATACATTGAGCAC TGTTGGCGTGGCAGTATTGCCAAAGGTGGATCCCCTGTTTGTCGTGCTCGTTGTTTGCCT ATAACAAAGGGCAGTGACATACCTTTACCGGATGTTATGAATTGCTCAGCTCGGACTGGA TTGGATATGCTGGCGAAGCACTACGCAGATGCCACTGGATTTGACATTGTCTTTTTCTTG CCAGATAGTGAAGATGACTTTGTTTCTTATACTGAGTTCTTGCGTTACCTGGGCTCAAAA AGTCGGGCAGGGGTTGTAAAAGTTGATGCAGGGACTACATTATTTTTGGTTCCACCATCA GATTTCCTAACAAATGTGTTACAAGTTGATGGTCCAGAGCGCCTTTATGGTGTGGTATTA CACATTCCACAAATCTCTGCTGCTGCTGCACTGAGGCCACAGTTAACTGGGACCGAACAA CAACCTTACTATGATGAAAGGGGAACTCTGCCTACTTCACAAAGAAAGTATAGTATCATT TCTCCTAATGACAGTGGCCACCTTGATGCTGATTATCGGACATCTTTGCATGAGGATTCA ATGCATCGGTTGGGGCATATTCCTGGAAGGCCTCGGGTGGATGAAGGACAAGCAGTTCAA CCAGCTCTTGCAGGTTTTCCTGCTAATCAAGCAGCTGGGCTGCAAGTACAATCTTCACTC AAGCCTGACATTATGGCTACATTAGCAAAACTTCTGCCTAGTGTGCAATCGTCACCGCTG GTAAGTGGTCAGATGAATGCCATAGACAGAACATCGCAGATACAGGATCCATCCATGCTT TCAAAAGTATGGAATCCTGAAAACCAAGTTACTGCTTCAAATTCATCCTTTGGGCAAATG GCTAATGTTCAGCATCCAGGACAGCAGTTTAGTGGCCAAGCTTCAGCTGCTCATTTGACA AACTATGGGAACATGGTGAGTGCTCAGGAGCGCTCAATACAACATACTGCTTACAACCCT GAAGTTACTTTGAACTTGCCACCACCACCTCCACTTCCAACAATACCACACAGTTCTGCT ACATTACAGTCTCAAGGTGGCCACAGTTTGCCCTCACAGACAAACCAGCAACTGTATCAG CCAGAGCAGTATTATGTGCCCCAAAACAACTATGGTCCATTAGTTCCAGTTAGCCATTCT AACCTTCAAATCAGCAACACTAACAACCCCACCCTTACCATCCCACAAGTGAACCCTGGA CCTCCAACAAATAATCAGATTGGGAATTTGGCCCAGCCACAGCATTCTATGCCACTGCAT GTTGATAGAGCAAGTCAGGATTTCTCTTCTCAGGGGCAACAACAAAATCGTGGTCCTGGT GCTGCACAAGCTCCCGAGGAGGATAAAAGCAAGAAGTACCAGGCGACACTCCAGTTAGCT CAAAACCTACTGCTTCAGTTACAGCAGCGTGGATCTGGAAATCAATCCTGAGACCTAATT ATTGCTTCAGGTACCCTCGTCTCGTCTCAGCTGGTCGCAAACAACTGAAAATATATATCC CAACTCGACGGCTTCGCCTCCACTCTACAATCGAAGCGGCCCATGGTGTGTCAGCTCGTT GGCCTACACCTACTTGCCCCAGTTCTCCCTTTTCAAGGACATACATTACCAGAAAACGAT TTCTTTTTCTCCTTTTTATTTTATCGTGTATTTGATATGGATAATCCGGCCTGAATTTTG TACTCGTTTGTTAGTATGGCCTCGTGTTATGTTGTTATTTACTCTGAAACCATATGTTAT TGTGTACGGTGCCGTGGTTC