Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d021181_T006
CDS Infomation

cds chromosome:B73_RefGen_v4:7:145153174:145158294:1 gene:Zm00001d021181 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGCTCACCAAATCAAACTCTTCACTGTCAAGACAAGCTTTGAATGTGATTGGTGATAAG
AAGGAAGCGGTTAAATCAAAGGTGAAGCCAGCTATTACCAGGTCTACACCTTCATCACCA
ACCAGTGTCTATTCTTTACCTGCGTCATTCGACAGATTCTCTAATGATCTGAAACAGAGG
AACAGAGTAAAAGGAGCAGAGAAAGCTTCATCTTCTAGGCTTTCCTTGTTAGAAAAGGCT
GCTTCTGTTTTGAAGGCTACTAGTGCCGGGAGAAAGCCCTCTGCTGCCAATTCGATCAGT
AGCTCTGTGTTAAGTATTGGATCAGGGCCAAAGGCCTTGAGAAGAAGCTGGGAAGGAAAC
ACGGATATTAAAGGAAAAGGCAATTCAGAATCAAAGACAGCCAAACCTGACAAGAAGTCT
GATAACAAGATGCCAATGACTCCTAGACGAAAATCACCAGTGGACCAGAAGGTGCCACCT
AAAGATGATAGCCAGAAAGCTGCTAGGAAGAGCACCGCAAGTGCTCCCTCAGATGACGCT
GACAAAGCAGCCAAGAAGCATATTCCTACTGTAAAGAGAACATCTGGGGTCTTAGGAAAC
TCGAATGTTACAAATCTAGTGAAGATTCCTCCCAACCGCAAAAAACTAACAGATATTAGC
ACTTCATGGACATCACTCCCTCCATCACTTGCCAAACTAGGAAAGGAGCTTCTTAAGTAC
AGGGAATCGGCACAAATAGCTGCTGCTGAAGCCATGCAAGAAGCTTCCGCTGCAGAGAGC
TTGCTCAGATGTTTGAGCTCGTACGCGGAGGTGAGCTCCACGGCGGAGGAGCACAACCCG
CAGCCAGCCGTAGAGAAGTTCTTCACCCTCCACGCCGCGCTTTCGCGCGCCACGGTGATC
ACCGACACCCTCACCAAGTCTGCCACATCTGCAGCATCGCCAGATTGCTCGGCAGCTAGC
GACGCTGGAACTGTGGGCTCCGCTACAGACGAGGAGACCGCTGCCGTCACAGCCGAGCGC
CGGCGCCGAGCTACGTCCTGGGTGAGCGCCGCTCTCGCTACGGACCTGTCCGCCTTCGGC
ATCTACAACCTCAAACCGGTCCCCGCCACCGTCTCCTCGCCGCTGGCCGTGGTCGTCGTT
GACGAGTCCGCGAAGCCGGCGACGGCCGCAGCCACGGCTACGAAATCATCGCCGTCGCCG
AAGTCGCGGATGTCCCCTGCGAAGGGGAAAGCGAGGACGGGCGCTGCGACGGCAGCAGCA
GCGGCGCTGACGAAGACGTCCGCGCCGACGGAGTGGGAGAGAGGAGAAGGGGCAGAGGAG
AGGGGCGAACTGGCGAAACGGCTCGGAGAGGAGTCAAGGGGTTGGTTCCTCGGCTTCGTG
GAGCGGTTCCTGGACTCTGACGTGGCGGCGTCCGCGCCGTGGGACCGCGAGCGTGCGGCC
AGGATGCTCCCGCAGCTAAAGCGGGTCAACGACTGGCTCGGCGAGATCGCAAAGCGCAGC
GAGACTCAGTCGCTGCCGCCTGCCGACGCGGACGGTGAGGCGACCACCACGAGCACCGCC
CCTGTCCCCCCGAACGACGGCTGCGGCGTGCCCGAGGAGACGATAGAGCGGTTAAGGAAG
AAGATCTACGAATATCTCCTCACCAATGTCGACTCTGCCGCCGCAATGCTTGGCGGTGGC
GGAGGCAGCGCGGCGGCCGCCCTGACGAACGGGAAAAAGGGCTGA

Peptide Sequence

PEP ID

Zm00001d021181_P006
PEP Infomation

pep chromosome:B73_RefGen_v4:7:145153174:145158294:1 gene:Zm00001d021181 transcript:Zm00001d021181_T006 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MLTKSNSSLSRQALNVIGDKKEAVKSKVKPAITRSTPSSPTSVYSLPASFDRFSNDLKQR
NRVKGAEKASSSRLSLLEKAASVLKATSAGRKPSAANSISSSVLSIGSGPKALRRSWEGN
TDIKGKGNSESKTAKPDKKSDNKMPMTPRRKSPVDQKVPPKDDSQKAARKSTASAPSDDA
DKAAKKHIPTVKRTSGVLGNSNVTNLVKIPPNRKKLTDISTSWTSLPPSLAKLGKELLKY
RESAQIAAAEAMQEASAAESLLRCLSSYAEVSSTAEEHNPQPAVEKFFTLHAALSRATVI
TDTLTKSATSAASPDCSAASDAGTVGSATDEETAAVTAERRRRATSWVSAALATDLSAFG
IYNLKPVPATVSSPLAVVVVDESAKPATAAATATKSSPSPKSRMSPAKGKARTGAATAAA
AALTKTSAPTEWERGEGAEERGELAKRLGEESRGWFLGFVERFLDSDVAASAPWDRERAA
RMLPQLKRVNDWLGEIAKRSETQSLPPADADGEATTTSTAPVPPNDGCGVPEETIERLRK
KIYEYLLTNVDSAAAMLGGGGGSAAAALTNGKKG

Transcript Sequence

Transcript ID

Zm00001d021181_T006
Transcript Infomation

cdna chromosome:B73_RefGen_v4:7:145153174:145158294:1 gene:Zm00001d021181 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

AGGTTCCATTCCGTATCCGGATCACCGTGCGGAAATTCTTGGTTGGTATGGTATGAGTAA
ATGCGATCTGCAGTGACTTGTGAGACAGGTTTCTGCACATTAGATTCACGAAAAAGTTGC
GACCTTTATTGCATTCAGGAGTGTTGGTCGGAACTGCCAGAGTGATGCGCTTAAGGATTC
ACGACAATGGCTTCATTGGTGCCCGGTGTCCTCGTGAAGCTCCTTCAGCATATGAACACG
GATGTAAAAGTCGCCGGCGAGCATCGCTCCTCGCTCCTTCAGGTTGTCAGCATCGTCCCA
GCGCTCGCCGGGAGCGATCTTTTCACCAACAAAGGCTTCTACCTCAAGGTGTCGGATTCA
TCCCATGCGACCTACGTTTCCCTTCCAGAGGAACAGCATGATCTCATCTTGAGCGCTAGA
AAAGGAAACGAGCAAATTGGAGAAAATAAATGCTTCACGTAAGCTTACCGGGACGGAAAA
TAAGAAGCCGATGCTCACCAAATCAAACTCTTCACTGTCAAGACAAGCTTTGAATGTGAT
TGGTGATAAGAAGGAAGCGGTTAAATCAAAGGTGAAGCCAGCTATTACCAGGTCTACACC
TTCATCACCAACCAGTGTCTATTCTTTACCTGCGTCATTCGACAGATTCTCTAATGATCT
GAAACAGAGGAACAGAGTAAAAGGAGCAGAGAAAGCTTCATCTTCTAGGCTTTCCTTGTT
AGAAAAGGCTGCTTCTGTTTTGAAGGCTACTAGTGCCGGGAGAAAGCCCTCTGCTGCCAA
TTCGATCAGTAGCTCTGTGTTAAGTATTGGATCAGGGCCAAAGGCCTTGAGAAGAAGCTG
GGAAGGAAACACGGATATTAAAGGAAAAGGCAATTCAGAATCAAAGACAGCCAAACCTGA
CAAGAAGTCTGATAACAAGATGCCAATGACTCCTAGACGAAAATCACCAGTGGACCAGAA
GGTGCCACCTAAAGATGATAGCCAGAAAGCTGCTAGGAAGAGCACCGCAAGTGCTCCCTC
AGATGACGCTGACAAAGCAGCCAAGAAGCATATTCCTACTGTAAAGAGAACATCTGGGGT
CTTAGGAAACTCGAATGTTACAAATCTAGTGAAGATTCCTCCCAACCGCAAAAAACTAAC
AGATATTAGCACTTCATGGACATCACTCCCTCCATCACTTGCCAAACTAGGAAAGGAGCT
TCTTAAGTACAGGGAATCGGCACAAATAGCTGCTGCTGAAGCCATGCAAGAAGCTTCCGC
TGCAGAGAGCTTGCTCAGATGTTTGAGCTCGTACGCGGAGGTGAGCTCCACGGCGGAGGA
GCACAACCCGCAGCCAGCCGTAGAGAAGTTCTTCACCCTCCACGCCGCGCTTTCGCGCGC
CACGGTGATCACCGACACCCTCACCAAGTCTGCCACATCTGCAGCATCGCCAGATTGCTC
GGCAGCTAGCGACGCTGGAACTGTGGGCTCCGCTACAGACGAGGAGACCGCTGCCGTCAC
AGCCGAGCGCCGGCGCCGAGCTACGTCCTGGGTGAGCGCCGCTCTCGCTACGGACCTGTC
CGCCTTCGGCATCTACAACCTCAAACCGGTCCCCGCCACCGTCTCCTCGCCGCTGGCCGT
GGTCGTCGTTGACGAGTCCGCGAAGCCGGCGACGGCCGCAGCCACGGCTACGAAATCATC
GCCGTCGCCGAAGTCGCGGATGTCCCCTGCGAAGGGGAAAGCGAGGACGGGCGCTGCGAC
GGCAGCAGCAGCGGCGCTGACGAAGACGTCCGCGCCGACGGAGTGGGAGAGAGGAGAAGG
GGCAGAGGAGAGGGGCGAACTGGCGAAACGGCTCGGAGAGGAGTCAAGGGGTTGGTTCCT
CGGCTTCGTGGAGCGGTTCCTGGACTCTGACGTGGCGGCGTCCGCGCCGTGGGACCGCGA
GCGTGCGGCCAGGATGCTCCCGCAGCTAAAGCGGGTCAACGACTGGCTCGGCGAGATCGC
AAAGCGCAGCGAGACTCAGTCGCTGCCGCCTGCCGACGCGGACGGTGAGGCGACCACCAC
GAGCACCGCCCCTGTCCCCCCGAACGACGGCTGCGGCGTGCCCGAGGAGACGATAGAGCG
GTTAAGGAAGAAGATCTACGAATATCTCCTCACCAATGTCGACTCTGCCGCCGCAATGCT
TGGCGGTGGCGGAGGCAGCGCGGCGGCCGCCCTGACGAACGGGAAAAAGGGCTGACGCGT
AAACGGGACGAACGGGAAAAAGAGCTGACAGGTAAACGTGTGGTCTAATTGGGCCGTTAG
TTGTGTGGAATTTGATTGGGCCAAAAAATGGGCTGGATGAGCTAATGTAGGCTTAGTTTC
TGTTGTTTCTTTGCTGGGCTTTGAGCCTTTCTGCTTCTCTTAGTGTTTCTTATTATGGCT
ACAG