Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d021147_T006
CDS Infomation

cds chromosome:B73_RefGen_v4:7:144103345:144106772:-1 gene:Zm00001d021147 gene_biotype:protein_coding transcript_biotype:protein_coding description:Proteasome subunit beta type-4
Sequence

ATGGCAGCGGCGGCGGGGCCGTACAAAGAGATGCTGGAAGTGGTGAACGCGTGCGCGGCC
CGGATCCGGTGGCGCCTTCGTCCAGCTTCCAAGCGCCGCCTCCTCAACGATATCCTGTTT
CTCTGCACTGGGTTGCGGCCTGTGGTACTGGTCGACTATGGTGGCACAATGCCTCAGCTA
CAAGAAAATCTTTGTGGCCTGCTATATCATGCCCGGCAGGAAACAAGCATATTGAATCCA
CTCCGCGTGATGATTATTGGAGATATGCTTTACTTGATCCATGTTAAAGGACTTGCGGAA
CATGCATCACCAAACGCAAGGTCGCAGCAAGGGCTAGCTTTCGTGGACCTAGAGAAAAGA
TGTTGCAATCTGCTTACAACCATAGAAGAGAATGACACTGTGCTGGAGCTTGTATCCATA
CAAGATCAATTCACAGCCAAATTTCCTCTAGATCTGTCTGATGTTCGACCTGGAATAACA
AAGCAAATGTCAGGAAATCCACAGAGTACTGTTGTTGCAGAGTGCACTGACAATCACGTT
GAGGACAGGACCCTATTGGTCGTTGATCTGAGTAGCTTCCTCGAGAACACCCAGATTGCC
TTGCCTTCTCTGAATGGGTGGCTTTTAGGTTATCCGGTAACATATTTGTTCCGCAATGCA
AGTTCTGAGGCAGCGATACAGAACCTCTCAAGGCAGTCTCTGCATATCTACCGAGTATAT
GTGTGCGGAAGTTATCGGTCAGCTGGCGAACGAAGAGAAGAGGAACTGATGAGTTTTTCA
GTTCCATGTGGCGCGAGCACGAAGCGTGATGAAGAAGTATGGGCTAGATCGTTCATAGCT
CGCATGAATGAGAAGCTCAGGCGATGCAGCCAAGTCTGGGCATCCATAAGGCTAGAAGTC
GAGGTTTTCCAGAGCCAGTCGCAGGTCATTGTGTTGTAG

Peptide Sequence

PEP ID

Zm00001d021147_P006
PEP Infomation

pep chromosome:B73_RefGen_v4:7:144103345:144106772:-1 gene:Zm00001d021147 transcript:Zm00001d021147_T006 gene_biotype:protein_coding transcript_biotype:protein_coding description:Proteasome subunit beta type-4
Sequence

MAAAAGPYKEMLEVVNACAARIRWRLRPASKRRLLNDILFLCTGLRPVVLVDYGGTMPQL
QENLCGLLYHARQETSILNPLRVMIIGDMLYLIHVKGLAEHASPNARSQQGLAFVDLEKR
CCNLLTTIEENDTVLELVSIQDQFTAKFPLDLSDVRPGITKQMSGNPQSTVVAECTDNHV
EDRTLLVVDLSSFLENTQIALPSLNGWLLGYPVTYLFRNASSEAAIQNLSRQSLHIYRVY
VCGSYRSAGERREEELMSFSVPCGASTKRDEEVWARSFIARMNEKLRRCSQVWASIRLEV
EVFQSQSQVIVL

Transcript Sequence

Transcript ID

Zm00001d021147_T006
Transcript Infomation

cdna chromosome:B73_RefGen_v4:7:144103345:144106772:-1 gene:Zm00001d021147 gene_biotype:protein_coding transcript_biotype:protein_coding description:Proteasome subunit beta type-4
Sequence

AAGTTCTTTCGCTGCGGAGATGGCAGCGGCGGCGGGGCCGTACAAAGAGATGCTGGAAGT
GGTGAACGCGTGCGCGGCCCGGATCCGGTGGCGCCTTCGTCCAGCTTCCAAGCGCCGCCT
CCTCAACGATATCCTGTTTCTCTGCACTGGGTTGCGGCCTGTGGTACTGGTCGACTATGG
TGGCACAATGCCTCAGCTACAAGAAAATCTTTGTGGCCTGCTATATCATGCCCGGCAGGA
AACAAGCATATTGAATCCACTCCGCGTGATGATTATTGGAGATATGCTTTACTTGATCCA
TGTTAAAGGACTTGCGGAACATGCATCACCAAACGCAAGGTCGCAGCAAGGGCTAGCTTT
CGTGGACCTAGAGAAAAGATGTTGCAATCTGCTTACAACCATAGAAGAGAATGACACTGT
GCTGGAGCTTGTATCCATACAAGATCAATTCACAGCCAAATTTCCTCTAGATCTGTCTGA
TGTTCGACCTGGAATAACAAAGCAAATGTCAGGAAATCCACAGAGTACTGTTGTTGCAGA
GTGCACTGACAATCACGTTGAGGACAGGACCCTATTGGTCGTTGATCTGAGTAGCTTCCT
CGAGAACACCCAGATTGCCTTGCCTTCTCTGAATGGGTGGCTTTTAGGTTATCCGGTAAC
ATATTTGTTCCGCAATGCAAGTTCTGAGGCAGCGATACAGAACCTCTCAAGGCAGTCTCT
GCATATCTACCGAGTATATGTGTGCGGAAGTTATCGGTCAGCTGGCGAACGAAGAGAAGA
GGAACTGATGAGTTTTTCAGTTCCATGTGGCGCGAGCACGAAGCGTGATGAAGAAGTATG
GGCTAGATCGTTCATAGCTCGCATGAATGAGAAGCTCAGGCGATGCAGCCAAGTCTGGGC
ATCCATAAGGCTAGAAGTCGAGGTTTTCCAGAGCCAGTCGCAGGTCATTGTGTTGTAGTT
GAGATCAGTATGGCTGTTATTACGGGCTGATGGCATAAACTCCTTATACAAAGCGACGTG
TCTCAGAAGTATCACTGCCCTGGGCCAAATAAACGAGTTGGATACAAGTCATGCATGCAG
AGGCCGGAGGTCATATCCATTATATATTTTATATATTTATCTAAAAAAGCCATTATATTA
TGCTCGAATTATTGAGCAGTTTATGTCACTATAAATTCAAATTCGTTTTAGTCGTTTCTG
TTGACTTTGTATAACCTAATCCTTGACGCCGACATGTCTTTTATATTTACATCAAAATCA
CAAAGGATGAATGCTCGAGTTACAATT