Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d021147_T004
CDS Infomation

cds chromosome:B73_RefGen_v4:7:144097160:144102862:-1 gene:Zm00001d021147 gene_biotype:protein_coding transcript_biotype:protein_coding description:Proteasome subunit beta type-4
Sequence

ATGGACGGCTTCCCCAAGAGCGTCGGCGGTGGCGGCCCTAACATTCCGGCGGGATCCCAC
CCCGCAGGCGGGAGCCAGGCGGCGGCAGGAGGAGGCGCGACGCAGCGGACGCAGTATCCG
TATGTGACTGGTAATTCAGTCATTGCCTTGAAATACAAGGATGGTGTGATCATGGCATGT
GACACTGGAGCCTCTTATGGATCAACTTTGAGATACAAGAGTGTGGAACGCATTAAGGCA
GTTGGCAAGCATAGCATCATTGGAGCAAGCGGAGAGTTCAGTGACTTCCAGGAGATTTTG
CGCTATTTGGATGAACTAACTCTGTCTGATCATATGTGGGATGATGGAAACTCGCTGGGC
CCCAAAGAGATCCACAGCTATTTGACAAGAGTGATGTACAACCGGCGCAACAAGTTTGAT
CCTCTCTGGAACTCACTTGTACTTGGTGGGGTGAAAAAGGGTCCAAAGGGTGATGAGAAG
TATCTTGGGATGGTTAACATGATTGGTACCCACTTCGAGGAAAACCATGTCGCTACTGGA
TTTGGAAATCATATGGCAATCCCGATACTCCGTGCTGAATGGCGCGATGATATGACTTTT
GAAGAAGCTGTTAAGCTGGTTGAGAAGTGCTTGGTGGTCTTGCTGTACCGAGACAGATCA
TCTATCAACAAATTCCAGATTGCCAAGATCACAAGTGAAGGATCAACCATCTACCCACCA
TATTCCTTGAAGACCTACTGGGGCTTCACTCACTTCGAAAACCCAGCCCAGGGCGCTGTG
GGATCATGGTAG

Peptide Sequence

PEP ID

Zm00001d021147_P004
PEP Infomation

pep chromosome:B73_RefGen_v4:7:144097160:144102862:-1 gene:Zm00001d021147 transcript:Zm00001d021147_T004 gene_biotype:protein_coding transcript_biotype:protein_coding description:Proteasome subunit beta type-4
Sequence

MDGFPKSVGGGGPNIPAGSHPAGGSQAAAGGGATQRTQYPYVTGNSVIALKYKDGVIMAC
DTGASYGSTLRYKSVERIKAVGKHSIIGASGEFSDFQEILRYLDELTLSDHMWDDGNSLG
PKEIHSYLTRVMYNRRNKFDPLWNSLVLGGVKKGPKGDEKYLGMVNMIGTHFEENHVATG
FGNHMAIPILRAEWRDDMTFEEAVKLVEKCLVVLLYRDRSSINKFQIAKITSEGSTIYPP
YSLKTYWGFTHFENPAQGAVGSW

Transcript Sequence

Transcript ID

Zm00001d021147_T004
Transcript Infomation

cdna chromosome:B73_RefGen_v4:7:144097160:144102862:-1 gene:Zm00001d021147 gene_biotype:protein_coding transcript_biotype:protein_coding description:Proteasome subunit beta type-4
Sequence

CTGCTACGTACTATGTTTCTAGTAGCCCACAAGATCTAGCCCAGTCCAAACCTTTCGATC
CGTGGTGTGTTGGATCTGAACCCAAGCTCCGAGTCGCTTTCGGGGTGGGCATTCTCCTCT
TCGTCTTCGGTTGCAAGAAAGAAAAAGCATCATGGACGGCTTCCCCAAGAGCGTCGGCGG
TGGCGGCCCTAACATTCCGGCGGGATCCCACCCCGCAGGCGGGAGCCAGGCGGCGGCAGG
AGGAGGCGCGACGCAGCGGACGCAGTATCCGTATGTGACTGGTAATTCAGTCATTGCCTT
GAAATACAAGGATGGTGTGATCATGGCATGTGACACTGGAGCCTCTTATGGATCAACTTT
GAGATACAAGAGTGTGGAACGCATTAAGGCAGTTGGCAAGCATAGCATCATTGGAGCAAG
CGGAGAGTTCAGTGACTTCCAGGAGATTTTGCGCTATTTGGATGAACTAACTCTGTCTGA
TCATATGTGGGATGATGGAAACTCGCTGGGCCCCAAAGAGATCCACAGCTATTTGACAAG
AGTGATGTACAACCGGCGCAACAAGTTTGATCCTCTCTGGAACTCACTTGTACTTGGTGG
GGTGAAAAAGGGTCCAAAGGGTGATGAGAAGTATCTTGGGATGGTTAACATGATTGGTAC
CCACTTCGAGGAAAACCATGTCGCTACTGGATTTGGAAATCATATGGCAATCCCGATACT
CCGTGCTGAATGGCGCGATGATATGACTTTTGAAGAAGCTGTTAAGCTGGTTGAGAAGTG
CTTGGTGGTCTTGCTGTACCGAGACAGATCATCTATCAACAAATTCCAGATTGCCAAGAT
CACAAGTGAAGGATCAACCATCTACCCACCATATTCCTTGAAGACCTACTGGGGCTTCAC
TCACTTCGAAAACCCAGCCCAGGGCGCTGTGGGATCATGGTAGATTTATGCTCTGCATGC
CGCGTATCATGCCATGAACTTAGGGGAGAGCAATCTGTGCTGCTGAAATCAAAACCCTTG
TGAACGTTTGTTCTGAACATAACTGGAACTCTGCATTTGCTTGTATGACATGCGTATGGT
TCAGGAAGTTTAATTCCAATATTTGGTC