Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d021084_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:7:142427996:142438706:1 gene:Zm00001d021084 gene_biotype:protein_coding transcript_biotype:protein_coding description:Gene trap locus 3 [Source:UniProtKB/TrEMBL;Acc:B6T7P6]
Sequence

ATGTTCAAGAATACATTTCAGTCTGGGTTCCTGTCCATTCTTTATAGCCTCGGGACCAAG
CCATTGCAGATATGGGATAAGGAAGTTGTGAATGGGCACATTAAACGACCCCAAGATGAA
GATATCCAATCTAATGTACTTGAAATTGTTGGAACAAATGTACAGTCAACTTACATCACA
TGCCCAGCTGATCCTTCTGCTACTCTTGGGATTAAGCTTCCATTTCTGGCTATTATTGTG
AAAAATCTTAAGAAATACTTCACGTTTGAGATCCAAGTTCTGGATGACAAGAATGTCCGA
CGTCGATTTCGAGCATCAAATTTTCAATCTGTCACAAGGGTGAAGCCATATATCTGCACG
ATGCCGTTGAAACTCGACGATGGCTGGAACAACATCCAGTTGAACCTTGCTGATCTGACA
AAAAGGGCGTACGGCACAAATTACGTCGAGACGCTGCGGGTGCAAGTTCATGCGAACTGC
CGGCTCCGCAGAATCTACTTCTCTGACCGCCTCTACTCGGAGGAGGAGCTGCCGCCTGAG
TTCAAGCTCTACCTTCCAATCCAGAAATCATAG

Peptide Sequence

PEP ID

Zm00001d021084_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:7:142427996:142438706:1 gene:Zm00001d021084 transcript:Zm00001d021084_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Gene trap locus 3 [Source:UniProtKB/TrEMBL;Acc:B6T7P6]
Sequence

MFKNTFQSGFLSILYSLGTKPLQIWDKEVVNGHIKRPQDEDIQSNVLEIVGTNVQSTYIT
CPADPSATLGIKLPFLAIIVKNLKKYFTFEIQVLDDKNVRRRFRASNFQSVTRVKPYICT
MPLKLDDGWNNIQLNLADLTKRAYGTNYVETLRVQVHANCRLRRIYFSDRLYSEEELPPE
FKLYLPIQKS

Transcript Sequence

Transcript ID

Zm00001d021084_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:7:142427996:142438706:1 gene:Zm00001d021084 gene_biotype:protein_coding transcript_biotype:protein_coding description:Gene trap locus 3 [Source:UniProtKB/TrEMBL;Acc:B6T7P6]
Sequence

CGCGGGCGTGCGAGCAAACGGCTTCAGGTTTTAAGACTTTAGATTCAGCCTTGTTACAGG
CCCACAAAAAATTAGGGAGTTTTCTTCTCCCGTCCACCTTGCGTGCTCGCGCGCGAGCTC
TCGTGGCGCAGCCACAACTAGGCGACCGCCGCCGCCCCTACGCCACGTGCTCGAGTCTAG
CCTCGTCGATTGCTTCCCCAGTTTAATTGATCTACAAGCTTCAGAACATGTTCAAGAATA
CATTTCAGTCTGGGTTCCTGTCCATTCTTTATAGCCTCGGGACCAAGCCATTGCAGATAT
GGGATAAGGAAGTTGTGAATGGGCACATTAAACGACCCCAAGATGAAGATATCCAATCTA
ATGTACTTGAAATTGTTGGAACAAATGTACAGTCAACTTACATCACATGCCCAGCTGATC
CTTCTGCTACTCTTGGGATTAAGCTTCCATTTCTGGCTATTATTGTGAAAAATCTTAAGA
AATACTTCACGTTTGAGATCCAAGTTCTGGATGACAAGAATGTCCGACGTCGATTTCGAG
CATCAAATTTTCAATCTGTCACAAGGGTGAAGCCATATATCTGCACGATGCCGTTGAAAC
TCGACGATGGCTGGAACAACATCCAGTTGAACCTTGCTGATCTGACAAAAAGGGCGTACG
GCACAAATTACGTCGAGACGCTGCGGGTGCAAGTTCATGCGAACTGCCGGCTCCGCAGAA
TCTACTTCTCTGACCGCCTCTACTCGGAGGAGGAGCTGCCGCCTGAGTTCAAGCTCTACC
TTCCAATCCAGAAATCATAGGATCCCGAGGGCGTGGAGAGACTCTGGTGACCGGGAGACT
TATATCGTACCATTGTGAGGATAACCTAGCTGCACATCTGCGCCTTCCTGAGATACAGAA
AAAAAATGTACCAGAATGTTTCTGTTAGTTTTCTGATTGTTGTGCGATGAATGATTAGGC
TGTTCTGTTTTCATAGCAAGGGCGAGTAGCCTTAGTTGGGGCTGTTACCCAGTGACCCCT
TTGTGTGAACGAGTAGTCAATGTTATTAGTCCGGACCCTTTGGCTACTGGTCCTTCTGGT
CCAAAGCAAAACGTACCGTTACTGCTCACTGCCTGGTCATTTAACGTGCTTCTTCCATGG
TTGTACCGTCTCTATGATAGTATCATGTGGCCGCTGATCTATTGGATACATGTTACGCGT
GACTCGCATTAAAAGCTTCACTTCTCTTT