Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d021071_T006
CDS Infomation	cds chromosome:B73_RefGen_v4:7:142143225:142150180:1 gene:Zm00001d021071 gene_biotype:protein_coding transcript_biotype:protein_coding description:hydroxyproline-rich glycoprotein family protein
Sequence	ATGAAGCGCCAATGTGATGAAAAAAGAGAATTGTACGAATTCATGCTAAATGCTCAGAAA GAAAAGGGAAGATCTAAGAATGCTAAAGGTGATAATGTAGCATCAGAACAATTGAAACAA GCTCAGGAAGATTATCAAGAGGAAGCGACTCTTTTCCTATTCCGGTTGAAGTCATTGAAG CAAGGACAGTTCCGAAGTCTTTTCACACAAGCTGCTCGGCATCATGCTGCACAGCTAAAT TTGTTCAGAAAGGGGGTCAAGTCCCTTGAGGCTGTAGAGCCACATGTTAGGCTCGCTGCT GAGCAGCAACACATTGATCATCAGTTTAGCGCACTTGAGGAAGAGGATTATGTTGTTGAG GATGAGAATGATGACGAGTACAACGACAGTCATGATGGAGAGTTGTCTTTTGATTATGGA GAAAATAAGGAAACTGAGAAATCTGGTATCGCTTCTAGGAATCATACAGAGGATTTTTTT AACAGCAGCAAAGAAGATTATTCTTCTGTTCCACATGAAAGACAGAGAATTGAAAGTCAG TCAGCACCGCTTTTTCCTGGGAAAAAGGTCAATACAGAAGAGAGAATAAAAGATTTGCGG CGTTCTGCGACAAGGAAGTTAAATACTTATGTTTTGCCTACCCCAAATGATGTTCGAGCT ACTTCTCAGATAGCATCAGGAAATCCTATTTCTGGACCTCTCGAGAGCAAAGGTGCCTTC CATTCATCTCCACTCCACCCTTCTGCAGACATAAGAGATTTGAGAGACAATAAACTACCT AGTCCTGCAAGATTGTCTAATGTACAGTCTGTGCTGAAAGAGAGCAATACCAATACAGCA GAAACAAGGAAAGTACTCCCAGTGGGTGATCTCGCTTTACCTGGCTATTATGACCTGAAG ACTCTCGACAACAACAAAGTGAAAAGAGGGTCATTTTCTGGCCCAATAGCTTCTAGACCA CGGCCAACAGAGAACAATGATGTTATTTCTGCAGCACCCAGGCATAGCTCTGCACATCAG CCAGTGCACATGAGAGTATCCCCCGGCAACTCGCCGCCACCCATTTCCTCACCGAAGATC AAGGAGCTTCATGAGCTTCCTCGACCGCCTGTTAATACATCAAAAAACACAACATTTCCC AGTTTGGTTGCCCACTCGGCCCCATTGGTAGCAAATCCTGCATCTCTGACACCCAAAGTT CAAGACCATTTTAGGGCAAGACAAATGCTTCCCAGTACTGCTTCACCTTTACCAACTCCA CCGCCTGGATCCATATCCCGCAGTTTTTCTATACCTTCTAGGGGGAGAACAGGTTCAGAC GGTAAGGAGATAGAAGATCAGCAAGACAAGGGAGCTGCCAGAATGAGCCTTTCTTCTCTT CCTTCAGCTCAAACATTGTTGGAAGATCGTCAGCCATTGTCAGCAGCTGCTGGATCGGTT AGCAAAACATAG

Peptide Sequence

PEP ID	Zm00001d021071_P006
PEP Infomation	pep chromosome:B73_RefGen_v4:7:142143225:142150180:1 gene:Zm00001d021071 transcript:Zm00001d021071_T006 gene_biotype:protein_coding transcript_biotype:protein_coding description:hydroxyproline-rich glycoprotein family protein
Sequence	MKRQCDEKRELYEFMLNAQKEKGRSKNAKGDNVASEQLKQAQEDYQEEATLFLFRLKSLK QGQFRSLFTQAARHHAAQLNLFRKGVKSLEAVEPHVRLAAEQQHIDHQFSALEEEDYVVE DENDDEYNDSHDGELSFDYGENKETEKSGIASRNHTEDFFNSSKEDYSSVPHERQRIESQ SAPLFPGKKVNTEERIKDLRRSATRKLNTYVLPTPNDVRATSQIASGNPISGPLESKGAF HSSPLHPSADIRDLRDNKLPSPARLSNVQSVLKESNTNTAETRKVLPVGDLALPGYYDLK TLDNNKVKRGSFSGPIASRPRPTENNDVISAAPRHSSAHQPVHMRVSPGNSPPPISSPKI KELHELPRPPVNTSKNTTFPSLVAHSAPLVANPASLTPKVQDHFRARQMLPSTASPLPTP PPGSISRSFSIPSRGRTGSDGKEIEDQQDKGAARMSLSSLPSAQTLLEDRQPLSAAAGSV SKT

Transcript Sequence

Transcript ID	Zm00001d021071_T006
Transcript Infomation	cdna chromosome:B73_RefGen_v4:7:142143225:142150180:1 gene:Zm00001d021071 gene_biotype:protein_coding transcript_biotype:protein_coding description:hydroxyproline-rich glycoprotein family protein
Sequence	GATATGAGGAGCTGTTACGATAACTTGCTTTCTGTTGCTGCAGCAATTGCAAATAGTGCA TACGAGTTCTCTGAAGCACTTCAAGACATGGGGGCTTGTTTGCTTAAAAGAATTACACCA AATAAAGATGGAATCAATGATAAAGTTTTGCTGTTGCTTGGGAAATCACAATTTGAACTT CGGAAACTTGTAGATAGTTATCGTGTGCATGTTCTTAATACGATCACCACTCCATCACTG TCGCTTCTTAATGAGCTTCAAACCGTGGAGCTATGTCCTCCTGGATCCCAAGGAAAGAGC TGAACTGCGGCCTTCACGTTGGATGAAAGGTGGAGGAACCAGCCTGTTCTTATGTTGGGT CTGTCCAGCACCAAGGCAGGTGCCCGAATGAAGGAGACGACCCTCTTTGGCCGTGCAGGG GGGCTGCATACCCAGATCTCGACTTCTGCAGGGGGTTCAAAAAGTATAGACGAGACCTGG TGGTTGGGCGCGCAGGCTGCGAGTTGGTGCAGCGATGAGCTGATCAGCAAGTGCAGCTTC TGCACCGCCCGCCTAACAAGGAAGCCGCGCACTGCGGCTTGCAGGCGCACCACGGCCTGC TCATGTGATGACGGCCATGGGGTGGCCCTGGAGGCCACAGCAAGGTGCTTCTCCCCACGA AGGGACTGTACCTGGCGGCGTGCCAGGAACCCTCGCGCTGCCGTCTGAAGCCGCACCGCT GCTTGGAGTTCCTTCTCTGTCTTCTCCTTGTAGCGGTGGAACATCACAACGAACTGATCC CACTGCTCTGCGAAGCGGCCAAAACTCTCTTTGAGCCGAGTGAATGCATCTAGAGTTGGA GAGGGCGGGTGGGAGGGCGTTGCGGCGGCTGATGGCGCGGCGGCTGGTGGTGGTGAGGGA TGGGCGGCTGGTGGTGGTGAGGATAACCTGAAGCTGATACCAGGTGTCATGGACCTTCGG TCCATGGGGATAACTGTCTTCTCCGGCGAGGTTATACCCCTCTGCCGCAGGCTTGGTTCT AGGGTAGCAGCCCTAGGCACTTGAGAGGGTCATTGCAAGGGAGAGAGAGAGATTGGTTTG ATAATATATTTCTTCCTCCCTTTGTCTCCTGCGTACAGGCCTATATATAGGCCACCGGTT GACCAACTAGGCAACCACTAATTAGGCAAGTGACTAATTGGAATTATCTCCCTACAATTT AGGTCTATCAATTTAGCCACCAAATTAGTCACTTTCCTTTGCCATGCCTTCCTTGCGCGC GCTTTCCTTTGACATGCCTTCCTTGTGCGCGCTTTCCTTTGTCATGCCTTCCTTGTGCGC GCTTTCCTTTGCCATGCCTTCCTTGCGCGCGCTGCTGCCAGCGCCCGTGCCTTCCTTGCG CGCGCTGCTGCCAGCGTCCCCTGCGGCCTCTCGCTTTTGGCGCACATAGGTGCGACCCCA CATGAGTGACCGCTCCCTATGATGCCCATGACACATACCCTGGGTTCAAATCCTGGTCCA CCACTGCTACCTGTGGCCTTTTAAGCATATAATAGAAATTAGCTCCCTGTTTACTCAAGA ATGGAGATAGATAGTAGTTTGAGCGATGTTTACTTGCAAAACCATGTATTAATATGTGCT TTATGTGGTCAAATGCTCATATCTGTACCATGGTCCTTGGACTATAAAATAATCTTTCAC AAACGTAATACTGATTTGTATTTACAAACTGGCTCACACTTTCCAGTATACTTACAGTAC CAAGGTTCAAAAGACCTGCCAAGCAATCATGGTCTTGCTTGATAGGCACAATCAATTTTC TAATTTGCAACTAGTTTATTTATGTATGTTGATGGTCGATGTCTGTCTCTTGAGTTAAAA GTATTCATTTTTAAGAGCTTTAGTTCTATGCCCATCAGACAACTATGTGTGATTAGTAGT GTATTTCCTGTTGCAGGAAATGAAGCGCCAATGTGATGAAAAAAGAGAATTGTACGAATT CATGCTAAATGCTCAGAAAGAAAAGGGAAGATCTAAGAATGCTAAAGGTGATAATGTAGC ATCAGAACAATTGAAACAAGCTCAGGAAGATTATCAAGAGGAAGCGACTCTTTTCCTATT CCGGTTGAAGTCATTGAAGCAAGGACAGTTCCGAAGTCTTTTCACACAAGCTGCTCGGCA TCATGCTGCACAGCTAAATTTGTTCAGAAAGGGGGTCAAGTCCCTTGAGGCTGTAGAGCC ACATGTTAGGCTCGCTGCTGAGCAGCAACACATTGATCATCAGTTTAGCGCACTTGAGGA AGAGGATTATGTTGTTGAGGATGAGAATGATGACGAGTACAACGACAGTCATGATGGAGA GTTGTCTTTTGATTATGGAGAAAATAAGGAAACTGAGAAATCTGGTATCGCTTCTAGGAA TCATACAGAGGATTTTTTTAACAGCAGCAAAGAAGATTATTCTTCTGTTCCACATGAAAG ACAGAGAATTGAAAGTCAGTCAGCACCGCTTTTTCCTGGGAAAAAGGTCAATACAGAAGA GAGAATAAAAGATTTGCGGCGTTCTGCGACAAGGAAGTTAAATACTTATGTTTTGCCTAC CCCAAATGATGTTCGAGCTACTTCTCAGATAGCATCAGGAAATCCTATTTCTGGACCTCT CGAGAGCAAAGGTGCCTTCCATTCATCTCCACTCCACCCTTCTGCAGACATAAGAGATTT GAGAGACAATAAACTACCTAGTCCTGCAAGATTGTCTAATGTACAGTCTGTGCTGAAAGA GAGCAATACCAATACAGCAGAAACAAGGAAAGTACTCCCAGTGGGTGATCTCGCTTTACC TGGCTATTATGACCTGAAGACTCTCGACAACAACAAAGTGAAAAGAGGGTCATTTTCTGG CCCAATAGCTTCTAGACCACGGCCAACAGAGAACAATGATGTTATTTCTGCAGCACCCAG GCATAGCTCTGCACATCAGCCAGTGCACATGAGAGTATCCCCCGGCAACTCGCCGCCACC CATTTCCTCACCGAAGATCAAGGAGCTTCATGAGCTTCCTCGACCGCCTGTTAATACATC AAAAAACACAACATTTCCCAGTTTGGTTGCCCACTCGGCCCCATTGGTAGCAAATCCTGC ATCTCTGACACCCAAAGTTCAAGACCATTTTAGGGCAAGACAAATGCTTCCCAGTACTGC TTCACCTTTACCAACTCCACCGCCTGGATCCATATCCCGCAGTTTTTCTATACCTTCTAG GGGGAGAACAGGTTCAGACGGTAAGGAGATAGAAGATCAGCAAGACAAGGGAGCTGCCAG AATGAGCCTTTCTTCTCTTCCTTCAGCTCAAACATTGTTGGAAGATCGTCAGCCATTGTC AGCAGCTGCTGGATCGGTTAGCAAAACATAGGAGTATTCACTGCGAAGGTGGATTACTAT CATTATCAAGCGGCTTGCTGAGCCCTTCCTGGAAGAATGCTGTACATATTAGCATGTGAG CCCTGGCCAGTATCGCGGAAGTAGTAGGTTGTTTCTCGTGCCCTTTGGCTAAGGTGTAGT CTGCAGATAGTGGGTTTGCGGAAATAAATTCCCCCAATTTTCTCACCGCTTGGTTGATTG ACGCGAGATTTGCTGTTGCGCGAGCTTGTTTGCTTGCCTTGAAGCGAGGTCGGAGTGCCA TCTGTTTTCTGCAGCTTCTGTAATTATCACCTGGTTTCGTTTCCTGTGGTTATGTAATTA CCATCCGCTTCACCCCCGATCAAAACCACCTGTGGTAAGGGGAAAAAAAAGGCAAGAAGC GCTGTGTTGTC