Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d021025_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:7:140788218:140790075:1 gene:Zm00001d021025 gene_biotype:protein_coding transcript_biotype:protein_coding description:Chloroplastic quinone-oxidoreductase

Sequence

ATGGCTGCTCCCAAGAAGACGATGAGAGCTCTGCGGTACGACAAGTATGGTGGAGGAGCT
GAAGGCCTAAAGCATGTGGAAGTGCCGGTCCCATCCCCGAGCAAGGGGGAGGTGCTGCTC
AAGCTGGAGGCGGCCAGCATCAACCCCATCGACTGGAAAATTCAGAAGGGCATGGTCCGG
CCCTTCCTGCCTAGGAAGTTCCCCTTCATACCAGTTGGAGACATGTCTGGCGAAGTGGTA
GAGCTAGGCAGCGGTGTGACCGACTTCAAGCCAGGTGACAAGGTCATCTCCATCAGTTTC
CCGAATGGAGGCGGGCTAGCCGAGTACGCGGTGGCGCCGGCGTCGCTCACAGTGGCACGG
CCGCCGGAGGTGTCCGCGGCGGAAGGCGCGTCTCTGCCCACGGCCGCGTCCACCGCGCTG
CAGCAGCTCAAGGCCGCGGGGGTAAGCAGCTTCGACGGCGGCTCCGGCTCCGGCTCCGGC
TCTGGCGCCGACAGTGACGGCCCCAAGAACGTGCTGGTCACCGCGGCCTCCGGCGGCGTG
GGCCACTACGCCGTACAGCTGGCCAAGCTGGCGGGGCTCCGCGTCACGGCCACCTGCGGC
GCGCGCAACCTGGGCCTCGTCGCGGGCCTGGGCGCCGACGAGGTGCTGGACTACAAGACC
CCCGAGGGCGCCAGGCTGCTGAGCCCGTCGGGCACCAGGTACGACGCGGTGGCGCACTGC
GCGACTGGCACCCCCTGGTCGGTGTTCGCGCCGGTTCTGGCCGACAGGGCCACGGTCGTC
GACGTCACCCCGGGGGTCGCCGCCGCGGCCAAGTCGTTCCTTCAGAAGGTCACCTTCTCC
AGGAAGAGGCTGGTGCCGCTGGTCCTGATCCCCAAGAAGGAGGAGATGGAGTGGCTGGTG
GAGATGACCAGGCAAGGGAAGCTCAGGACGGTGGTCGACTCCAGGTACTCGTTGAGCAGA
GCGCAGGAGGTGTGGGCCAAGAGCATCGATGGGCATGCCACCGGCAAGATCGTCGTGGAA
ATGGGCGGTGCTGCAGAGTGA

Peptide Sequence

PEP ID

Zm00001d021025_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:7:140788218:140790075:1 gene:Zm00001d021025 transcript:Zm00001d021025_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Chloroplastic quinone-oxidoreductase

Sequence

MAAPKKTMRALRYDKYGGGAEGLKHVEVPVPSPSKGEVLLKLEAASINPIDWKIQKGMVR
PFLPRKFPFIPVGDMSGEVVELGSGVTDFKPGDKVISISFPNGGGLAEYAVAPASLTVAR
PPEVSAAEGASLPTAASTALQQLKAAGVSSFDGGSGSGSGSGADSDGPKNVLVTAASGGV
GHYAVQLAKLAGLRVTATCGARNLGLVAGLGADEVLDYKTPEGARLLSPSGTRYDAVAHC
ATGTPWSVFAPVLADRATVVDVTPGVAAAAKSFLQKVTFSRKRLVPLVLIPKKEEMEWLV
EMTRQGKLRTVVDSRYSLSRAQEVWAKSIDGHATGKIVVEMGGAAE

Transcript Sequence

Transcript ID

Zm00001d021025_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:7:140788218:140790075:1 gene:Zm00001d021025 gene_biotype:protein_coding transcript_biotype:protein_coding description:Chloroplastic quinone-oxidoreductase

Sequence

ACTGCCTGAACCAGACCAACCGTATCAGCATCAGCGTACCGGCCGCGGAGGAGCCATCTC
TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCAGGCGCATCAAGCCATGGCTG
CTCCCAAGAAGACGATGAGAGCTCTGCGGTACGACAAGTATGGTGGAGGAGCTGAAGGCC
TAAAGCATGTGGAAGTGCCGGTCCCATCCCCGAGCAAGGGGGAGGTGCTGCTCAAGCTGG
AGGCGGCCAGCATCAACCCCATCGACTGGAAAATTCAGAAGGGCATGGTCCGGCCCTTCC
TGCCTAGGAAGTTCCCCTTCATACCAGTTGGAGACATGTCTGGCGAAGTGGTAGAGCTAG
GCAGCGGTGTGACCGACTTCAAGCCAGGTGACAAGGTCATCTCCATCAGTTTCCCGAATG
GAGGCGGGCTAGCCGAGTACGCGGTGGCGCCGGCGTCGCTCACAGTGGCACGGCCGCCGG
AGGTGTCCGCGGCGGAAGGCGCGTCTCTGCCCACGGCCGCGTCCACCGCGCTGCAGCAGC
TCAAGGCCGCGGGGGTAAGCAGCTTCGACGGCGGCTCCGGCTCCGGCTCCGGCTCTGGCG
CCGACAGTGACGGCCCCAAGAACGTGCTGGTCACCGCGGCCTCCGGCGGCGTGGGCCACT
ACGCCGTACAGCTGGCCAAGCTGGCGGGGCTCCGCGTCACGGCCACCTGCGGCGCGCGCA
ACCTGGGCCTCGTCGCGGGCCTGGGCGCCGACGAGGTGCTGGACTACAAGACCCCCGAGG
GCGCCAGGCTGCTGAGCCCGTCGGGCACCAGGTACGACGCGGTGGCGCACTGCGCGACTG
GCACCCCCTGGTCGGTGTTCGCGCCGGTTCTGGCCGACAGGGCCACGGTCGTCGACGTCA
CCCCGGGGGTCGCCGCCGCGGCCAAGTCGTTCCTTCAGAAGGTCACCTTCTCCAGGAAGA
GGCTGGTGCCGCTGGTCCTGATCCCCAAGAAGGAGGAGATGGAGTGGCTGGTGGAGATGA
CCAGGCAAGGGAAGCTCAGGACGGTGGTCGACTCCAGGTACTCGTTGAGCAGAGCGCAGG
AGGTGTGGGCCAAGAGCATCGATGGGCATGCCACCGGCAAGATCGTCGTGGAAATGGGCG
GTGCTGCAGAGTGAACCCGGCAAGCGGGCATGCGTGCACATTGTGTTGGTTTGTTCATGG
ATTGTTCTCTCTGTTCGATCATCGCGACAGCCATTCATAATAAGCCATCCATCTGATGGA
AGAGAACTTTGCACACCAACACA