Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d020946_T008
CDS Infomation

cds chromosome:B73_RefGen_v4:7:137472714:137479934:1 gene:Zm00001d020946 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein EMSY-LIKE 4
Sequence

ATGAAGGCGGTGGGATACAACCTCTACGATAGCAGCGGGACTGATGACGATCTCCCTCCA
GCACAAAATAGAGGATTGAGAGGACGGGTTTTCAGTGGGAATGGCCGAGCATCTGCTGGG
GCATTTCCTTACATGAGGGCAAATAATGATTTGGAGAGTGAAATACATCGAGTTGAGCAA
GATGCATATACTGGTGTTCTTAGGGCATTTAAAGTGCAATCTGATGCAATATCCTGGGAA
AAAGAGAGCTTGATTACTGAACTCAGGAAAGAACTGAGGGTTTCTGATGAGGAGCATAGG
GAGCTATTAAATAAAGTCAATGAAGATGGGAGCATCCGTCAAATGAGGGAGTTAAGACAG
GCAGGTGGAATCCCAAGTGGTCTGCATCGTGGCAACAGGGTTTTATATGATGCAGAACCT
GGGCCCACTACCAAGAGGCAAAGGGCATCTCATTCGATTCCTTCGCAATCTGCAGGCCTC
CAGTCCCCTATGATGCCCTCCCACTCAGTTTCATCTGCAAAATGGGGTCCTTTGTCAGCA
AGAGGCAAGAAGGCGAAGATGATTGATAAACACTCCTTAAACAGATGGCACCTGAAGATA
TAA

Peptide Sequence

PEP ID

Zm00001d020946_P008
PEP Infomation

pep chromosome:B73_RefGen_v4:7:137472714:137479934:1 gene:Zm00001d020946 transcript:Zm00001d020946_T008 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein EMSY-LIKE 4
Sequence

MKAVGYNLYDSSGTDDDLPPAQNRGLRGRVFSGNGRASAGAFPYMRANNDLESEIHRVEQ
DAYTGVLRAFKVQSDAISWEKESLITELRKELRVSDEEHRELLNKVNEDGSIRQMRELRQ
AGGIPSGLHRGNRVLYDAEPGPTTKRQRASHSIPSQSAGLQSPMMPSHSVSSAKWGPLSA
RGKKAKMIDKHSLNRWHLKI

Transcript Sequence

Transcript ID

Zm00001d020946_T008
Transcript Infomation

cdna chromosome:B73_RefGen_v4:7:137472714:137479934:1 gene:Zm00001d020946 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein EMSY-LIKE 4
Sequence

ACAGAACCCTAATTTAAGCTATTTGGCTATTTGTATCCGGACCTGATCTAACTACAAGTT
ACTAACTACGATTTTTGCCGCAAAACATATTGGTTGTACATATGTATACCCATGTCCTTT
AATCGAGCTCAGACGCGCCGGTGCCTGGATCCGGAGGAAGTGCTGCGGGTTTCGGCGGTT
CGTCTCTCTCGTTGTTTCCGGCGGGGTTATGAAGGCGGTGGGATACAACCTCTACGATAG
CAGCGGGACTGATGACGATCTCCCTCCAGCACAAAATAGAGGATTGAGAGGACGGGTTTT
CAGTGGGAATGGCCGAGCATCTGCTGGGGCATTTCCTTACATGAGGGCAAATAATGATTT
GGAGAGTGAAATACATCGAGTTGAGCAAGATGCATATACTGGTGTTCTTAGGGCATTTAA
AGTGCAATCTGATGCAATATCCTGGGAAAAAGAGAGCTTGATTACTGAACTCAGGAAAGA
ACTGAGGGTTTCTGATGAGGAGCATAGGGAGCTATTAAATAAAGTCAATGAAGATGGGAG
CATCCGTCAAATGAGGGAGTTAAGACAGGCAGGTGGAATCCCAAGTGGTCTGCATCGTGG
CAACAGGGTTTTATATGATGCAGAACCTGGGCCCACTACCAAGAGGCAAAGGGCATCTCA
TTCGATTCCTTCGCAATCTGCAGGCCTCCAGTCCCCTATGATGCCCTCCCACTCAGTTTC
ATCTGCAAAATGGGGTCCTTTGTCAGCAAGAGGCAAGAAGGCGAAGATGATTGATAAACA
CTCCTTAAACAGATGGCACCTGAAGATATAAGATGGGAATTTGATGGACATCTTTCAAAT
CATGATGGCTGGGGCCCTTCTGGCCCTATGCTGAAGAGGCACATGACCAACAACGGTGCT
ATGGCAGGTTCAATCAGGGGAAGAGGAAGGTTATCGATAAATGAGCCTATAAAAGACTAT
GCTCCACCTCAAAATGACATCAATAGGAATTTTGATTATATTGACATACCAAATACTGAA
AGTGTTGTTACTGAGGTGGAGAGGGTGTTGGCCAATCCAAATATGCCTGAAATCGAGAAG
GCAAGGAAACTGCTGAAAGATCAGGAGCAGTCATTACTTGATGCAATTGCCAGACTTGAT
GAAGCATCTGATAGCGATAGTGGTAACTGGTAAGTTCCTGGCCAGTTCTACCTCATTGAG
GTTCAGATAATACTATACACTTAGTCACTTATACAGCAAGATGATACTTCCTCCATTCCG
AAAGTTAAATGTTTTAGCTTTTTACTGTCATACTTTCTAACTTCGACCCAATTTAGAGTA
AATTACAATGCCATTCTGTAAACTATTATACCCCGTTTGGATGTAGATATTGGAGCACAG
AATTGGGAATTGGAATCAACTTTCCTAAATTCTGTTGTTTTGTTACACGTGGAATTGAGA
TTTGGAATCAGAGACCCATTTCTCTGGAATTGGACTATAACTAGAAACCCCCTCTCCCAA
TACAAAGCCTCACCCCTCGGTATTGCGTGGAATTAGACTGCATAATTCCAAACTCCAATT
CAGTGATATTCAAACAATAGAATTGGAATTACATCTCATTTCAATACCATGTCTGATTTG
GTATTCAACTCAATTCAATTCCATCCTCTCCAATATCGTCATCCAAATGGAGCAACGTCA
TTTGTATCTAGGTCTCCAAACTATGAAATTGTAGATGTAGGTCCCTAAACTATTTAAGTA
TCACAATTCTGATTCAAAGCAGCCATATCATAGAAAATTAGCTAATGTGGAGATGTGCTC
TACCATGGAATTGACATGTTGCTCTGTAGCTCATATTTACATGGTCAATCCCTAAACCTA
AAATATATGTGATTCTCACAAAAGTTCCCAAACTATGAAATTGCAAATCTAAGTCCCCAA
ACTCTAATCTATTGAAGTACTCAGATCCTGGTCCAAAGCATCTACGTATCTCCGCCGCTG
CAAGGGCGACACACTTGAGACCTACTCATGTCGGTGGCTACTGAGCATTATCAAGAATGA
GTTATGCAGGGTTCTCAACTGCAGCAAGCTCACTTGAGACCTAGTGGATCTAACAAACAT
TAGTAGTTTATTAGTATGACCACAAATAATGTTGAAGAAGTCACCAACAACCGACGTCCA
TGTACACCTCTAGAATGAGTTATGCAGGGTTCTCAACTGCAGCAAGCTCACTAAGACGGT
GTCCATGCATGGTGCCCAGAATGAGTTGCTAGGGCTGGCACATTTTTGCCGAAAATGGAT
CACAGAACCGAAGTGTCGGTTGTTTGGTTTTTCGGTGCGGTGTTGGTTTAGATTTTTGGC
AACTTCGGTGATCGGCTTCAGTGTTGGTTTTTACATCACACCTAACTGTTAAACTGTCTT
ATACCAAACAAAGCAAAACATGTCATGCACATCCTATCAGGTCTACGACCCATAACTCCC
TTCAGCACACACCTCCAAAGTCCCAGACCTGGATCCATTACCTCTGCCTGCACAACCACA
TGCTCCGCCTCCACATCAGCTTCCCCACGCCCAACTTGTGGGATGAGGCGCTTATCCATT
TGGGCGAGCCTGCAGTCCTGCTCATGCCGCGGTGCCGCCTATGGCAGGGAGCAGCAAGAA
GCCAAGAACGTGGAGTTCATGGGTTGTGCAAAACAGCTAGGGCCTGTTTGGTGACAATGT
TTCTCAAAACCATAGTTTTACAATACTACACTTTGCAGTTGTCATTAATAATACCGTAGT
TTTGGCCAGCTCCAAGAATACTAGCTATTGTTTGGAGATATCGTAAACCATGGTATTTAA
GCAAAAGCTAGTCCTACCATAAAAACTTTGTTCAAGTGGAGCTTCACTCCAAAAATACCA
TTGTATCTAGAATGCCATGGTTTTGAAAACACAGCTTTCCGGAATGCAACCAAACACATG
GTATAAAATGCTATGACATTCCTATAGATTATGATACTGCCTAGAAAGTATAAAAAATAT
TTTACTTCGCGAAAGGGCCTCTAGCCTAGCGGTTAAGGACTTCCGAGTAGCACCTCCAAG
TCCTGGGTTCGATTCCTATCGGGAGCGAATTTTCAGGCTTGGTTAAAAAAATCCCCTCGC
TGTGCCTCATCCGCTCTCAGGTTACGATGTCCTGTGCGCCATCCTCTGGTTGGGCTGTTG
CAGAGTGGACAGTTGACGCCGACCCGTTAGCGATGGGGGGCCAGGGTTCGGGGATTTTCT
CGGCCGGGACCATTGTTTCGGTCTCTTCTTATATGGAATACCGGGAGGGCGGTCTTTCCC
TCCCCGGCCGAGTTTTTTTAGAAAGTATAAAAATATTTTACTTCCAAACATGCACTTAGT
AGTTTTTAGTAATTAATATTGTTTATTGCGATAAATTGTTGTCTATGTATGAATGTATTA
CTCCCTCAGTCTACAAATGTTTGTCGCTATGGTATTCGTGTCAGTCAAACTTTCTCAAGT
TTGACTAGATTTATAGAATATATTAGCAACATTTGCATCTTAGAATAATGTTACTATAAA
AATAGATTCAAAGATCTACCTAATGATACTAATTATGTACTATAAATATTAATATTTTTT
TATAAAATATGGTTAAAGTTAAAAATGGTTGACTCCTCGAAAAGTGGAAAAGTGAGTAGG
CAAACATTTGCCAGGTTACTGCACTGCTATTCGATGAACACCAAACTGATAAACTGAACA
CTGAATTCATTGGTTTTTGGCTTTTTGTAGCACCGAACTGTGGTTTCTTTTTTTGTAAAT
TACATCCATTTTTCCTACCTTCATATACAATATCTTTCCTTTTTATATTTTTTTTATGCA
GACATAAAAAACATCTCGCGCAGGGCGCCTGTTAGACACTAGTTTTTTCTATACACTTTC
AAGACAAAGATAAGGTTGAATCAGGAGAAATCCAAATTGACGAAAATTTAGAACATATGT
AGTACTCCCTTTGTCCCAATATATAAAGCGTAACCACCTATGGTTCAAAGACAAAGAAAT
ACTTTAATTCTTTCAATACTACTGCATCGATGTACGCATGCCTATAGAGAGCATGCATTA
TATTATGGGACAAGAATAAAAAGTAGTTAGACCTTATAAACTGGGACGGAGAGAGTATTT
GCTAATGGATTAATGGTCCAGTTTATAATAGGATTCTTGGATGAACCTTTTGAGGTATAG
GAGTTTTTAACTACTGGTATATTAAAGTCTTCCTGGATGCTTGTTAAATGCACATCAGAA
ATGCACATCCGTCAGCTGATCATCTTACATGTTGTATTCATGCTTCGCACATTTCCCTGA
TCGATTTTTGTGTTATAGAAGATATGGCTATGGAAGACCGAAGGGGTTCTGCTGGGGTCC
TGGGGAATGGAACGGCATTGCTACTTAGTTGTTGGAATTGGAAGATTAACATGCATCTGT
GTATCACCTACCTCGACCACAGAACAAACAAACCACATTATGGCAAAAAAATTGACATGC
CAGAAAATGGTGCCTGGAAACTGTTGATGCCTGAAATGGGATTTGCTGGCTACACAAAAT
TGAGCGCACGAGGAGCAGGGATATGCAAATGTCAGAACTGTTTGAATGGTGTTTCCTATG
TAGCGTAGTAAAAGTAGCTTAAATGTTCTAGATGATTAGCACGGATCACTTAGCATTCCT
GATTCAGTATAGGTAGAT