Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d020931_T003
CDS Infomation	cds chromosome:B73_RefGen_v4:7:136913669:136915596:-1 gene:Zm00001d020931 gene_biotype:protein_coding transcript_biotype:protein_coding description:Polygalacturonase
Sequence	ATGACTTCGCCGATTCAGCTCGCGGCCGCGCCTTTGCTGCTGCTAGTAGTAGTGGTCGCG GGCACACGGTCGAGCCGCATCTTTTCGGTGGCCGACTATGGTGCGGCGGGCGATGGGTTC CGCTACGACACGGCGGCGATTCAGGCCGCTGTAGACGCCTGCGCGGCGGCGGGCGGGGGC CGCGTTCTTCTCCCGGCGCCGGGCAACTACCTGACAGCGACCGTCCAACTCCGCTCGCGG GTGGTGCTGGAGGTGCCCCCCGGAGCGCGGCTTCTGGGCGGGACCAGGCAGGCGGACTAC CCGCCCGAGTCGCGCCGGTGGTACGTCGTTCTGGCCGAGAACACCACGGGCGCCGGCATC ACGGGGGGAGGCGAGATCAACGGCCAGGGCGGGGCATTTGTTGTCAGGCCCAGCGAGGTG AAGAACGTCATGGTGAGCTGGAATGCCACCGGCGATTGCCTGGGCGATGAGTGCCGGCCG CGGCTTGTTGGCTTCATTGACTCTAAGGATGTTAGGATCCACGACATCACACTCAACCAG CCCGCCTACTGGTGTCTTCACCTTGTCAGATGTGACAACACAGTCATCCACAATGTGTCG ATATTTGGAGATTTTAAAACTCCCAACAATGATGGCATTGACATTGAGGATTCTAACAAC ACTGTCATAACTGATTGCCACATAGACACCGGAGACGATGCTATAAGCCCAAAGTCGACA ACTGGACCAGTTTATAACTTGACGGCAACAAACTGTTGGATGCGGACTAAATCTTGTGCT ATCAAGTTTGGAAGTGCAAGCTTCTTCGACTTCAAAAGACTGGTTTTTGACAACATTACA ATAGTTGATTCACATCGAGGACTTGGGATGCAGATCCGGGATGGAGGGAATGTGAATGAT GTGGTGTTTTCAAACATTAAAATGAGGACCAGGTACTACCATCCTTTATGGTGGGGAAGA GCCGAACCAATCTATATCACAACTTGCCCAAGGCACCCAGATTCAAAAGAAGGCGCCATT TCAGACATAAGATTCATCAACATCTCATCGGTATCAGAAAATGGAGTTTTTCTGGCTGGA TCTAAGCATGGGCTGCTCCGCAACCTGAAATTCAAGAACATAGACCTTACCTACAAGCGT TGGACAAACTACACGGGAGGGCTCTATGATTACAGGCCTGGGTGCCAGGAGATGGTGAAG CACAAGACTGGTGGCATGATGCTGGAGCATATCTCCGGTCTGGAGATTGACAACGTGAGG ATGAGATGGGCGAGAGGAAGCCTGAAGGGCTGGAATGTTAACCCTATCCTCTTCCGGCCA TCAACCATCGATAATCTGTCTTTCCATGACTGGCAGTCAGTGGATGTTCAGTAG

Peptide Sequence

PEP ID	Zm00001d020931_P003
PEP Infomation	pep chromosome:B73_RefGen_v4:7:136913669:136915596:-1 gene:Zm00001d020931 transcript:Zm00001d020931_T003 gene_biotype:protein_coding transcript_biotype:protein_coding description:Polygalacturonase
Sequence	MTSPIQLAAAPLLLLVVVVAGTRSSRIFSVADYGAAGDGFRYDTAAIQAAVDACAAAGGG RVLLPAPGNYLTATVQLRSRVVLEVPPGARLLGGTRQADYPPESRRWYVVLAENTTGAGI TGGGEINGQGGAFVVRPSEVKNVMVSWNATGDCLGDECRPRLVGFIDSKDVRIHDITLNQ PAYWCLHLVRCDNTVIHNVSIFGDFKTPNNDGIDIEDSNNTVITDCHIDTGDDAISPKST TGPVYNLTATNCWMRTKSCAIKFGSASFFDFKRLVFDNITIVDSHRGLGMQIRDGGNVND VVFSNIKMRTRYYHPLWWGRAEPIYITTCPRHPDSKEGAISDIRFINISSVSENGVFLAG SKHGLLRNLKFKNIDLTYKRWTNYTGGLYDYRPGCQEMVKHKTGGMMLEHISGLEIDNVR MRWARGSLKGWNVNPILFRPSTIDNLSFHDWQSVDVQ

Transcript Sequence

Transcript ID	Zm00001d020931_T003
Transcript Infomation	cdna chromosome:B73_RefGen_v4:7:136913669:136915596:-1 gene:Zm00001d020931 gene_biotype:protein_coding transcript_biotype:protein_coding description:Polygalacturonase
Sequence	ACACAATCGTCTCGCAAAGATTCTCGTTGGTCAGTTTGAGACTTAGCCTTGGAGGAGAAC AGAACAGCCACGATGACTTCGCCGATTCAGCTCGCGGCCGCGCCTTTGCTGCTGCTAGTA GTAGTGGTCGCGGGCACACGGTCGAGCCGCATCTTTTCGGTGGCCGACTATGGTGCGGCG GGCGATGGGTTCCGCTACGACACGGCGGCGATTCAGGCCGCTGTAGACGCCTGCGCGGCG GCGGGCGGGGGCCGCGTTCTTCTCCCGGCGCCGGGCAACTACCTGACAGCGACCGTCCAA CTCCGCTCGCGGGTGGTGCTGGAGGTGCCCCCCGGAGCGCGGCTTCTGGGCGGGACCAGG CAGGCGGACTACCCGCCCGAGTCGCGCCGGTGGTACGTCGTTCTGGCCGAGAACACCACG GGCGCCGGCATCACGGGGGGAGGCGAGATCAACGGCCAGGGCGGGGCATTTGTTGTCAGG CCCAGCGAGGTGAAGAACGTCATGGTGAGCTGGAATGCCACCGGCGATTGCCTGGGCGAT GAGTGCCGGCCGCGGCTTGTTGGCTTCATTGACTCTAAGGATGTTAGGATCCACGACATC ACACTCAACCAGCCCGCCTACTGGTGTCTTCACCTTGTCAGATGTGACAACACAGTCATC CACAATGTGTCGATATTTGGAGATTTTAAAACTCCCAACAATGATGGCATTGACATTGAG GATTCTAACAACACTGTCATAACTGATTGCCACATAGACACCGGAGACGATGCTATAAGC CCAAAGTCGACAACTGGACCAGTTTATAACTTGACGGCAACAAACTGTTGGATGCGGACT AAATCTTGTGCTATCAAGTTTGGAAGTGCAAGCTTCTTCGACTTCAAAAGACTGGTTTTT GACAACATTACAATAGTTGATTCACATCGAGGACTTGGGATGCAGATCCGGGATGGAGGG AATGTGAATGATGTGGTGTTTTCAAACATTAAAATGAGGACCAGGTACTACCATCCTTTA TGGTGGGGAAGAGCCGAACCAATCTATATCACAACTTGCCCAAGGCACCCAGATTCAAAA GAAGGCGCCATTTCAGACATAAGATTCATCAACATCTCATCGGTATCAGAAAATGGAGTT TTTCTGGCTGGATCTAAGCATGGGCTGCTCCGCAACCTGAAATTCAAGAACATAGACCTT ACCTACAAGCGTTGGACAAACTACACGGGAGGGCTCTATGATTACAGGCCTGGGTGCCAG GAGATGGTGAAGCACAAGACTGGTGGCATGATGCTGGAGCATATCTCCGGTCTGGAGATT GACAACGTGAGGATGAGATGGGCGAGAGGAAGCCTGAAGGGCTGGAATGTTAACCCTATC CTCTTCCGGCCATCAACCATCGATAATCTGTCTTTCCATGACTGGCAGTCAGTGGATGTT CAGTAGATTTAAGTGGCACAGTTGTATTACGTGTGTATCTATCAGAATAAAGGGGTGATT CTTTTGTGAAATATTGAAATGTGTTAATAATAAGCAATC