Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d020913_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:7:136282835:136284622:-1 gene:Zm00001d020913 gene_biotype:protein_coding transcript_biotype:protein_coding description:E3 ubiquitin-protein ligase UPL5
Sequence	ATGTCCGCCGCGCTCGCCTGTCTCCGCCGCACCTCCAAGCGCCGCCGAGACGCGCCCGAT CATGCCCTCCCCCCATTGTTGAAGCAGCCGCTGATGGCCCACGCCGGCGCCGAAGCCGCT GAGTCGTCTTCGTCGTCCTCGGCCTCCGCTTCGGGGGTCGATGGCGCCTCTGCGGCGGCG GCGGCGGCCTCCGCATCGTCGCCCTCCGCGTCGCCCCGGGTGGTGCACTTCTTTGTGCGC GCTACCGATTCCAGAACCATCGCGATGCACGCGGGGTGGGACGACACCGTCGGCGCCGTG CTCGACCACCTCGGCGCCTGTGGGTACGGGCGCGATTTGCGGCTCCTCTACGCGGGACGG CAGCTCGCGCTGGATTCCACCCTCGCTGAGCTCCGCCTCCCGCCGGACTCCACACTTCAC CTTTTGGCGCGTCTCAGGTCCACTCAGCACCCTCACGCGTGGCAGCTCGCATCGCACATC GCCAGCACTGCCGCCATCGCGGAGTCCGAGCCCTCTAGGATGCCCTCCGCCGCCTTCTCC CTCGACGAACTAGTGAAGGAGTTTATCCTCCGCGCCCACCGCGCCAACCTGAGGCTTTCC CGCTACGATCGCGCCGCTACAGTCGAGGACCGGGCCGCGGCGGACCACACCGCCGAGTAC CTCGAAATCTTCCTCCAGGCCGGCGCCGCCTTAGCGCTGGTTCGCCTCTACCTCTCAAAG TCCCCCTTCCGTTCTTACGCCGAGAGTGCCATTAAATGCTTTGTCCCCACGGACCCTTCG TCCTTACCTATGGACTTACTGATCGTGCTGCTTGAATTCTGCCGCTTGCTCTCCTTGGCT GCAGGCAGGAATGAATTACTGTATAGATCATGTCGTCGTACACTTGCCTCAGCTTTATCC ACTCGCCCCAAGCTACCCCCTTCTATGAACTCACCAACCAGGTTGATCGAGCAAGTCCTG CCATTTGCCCGTGAAACAGTGGATATGGTCCTTGATGGGCTTGCATCAATGCCAATGATT ATATCGCCTAGTGATCTAGATGAGTTCTCAAACTTTCTCAAAGTGATGTGCCAGCAGGCA CGCCGTTGGATTTCTGATGAGGGGCCGATACCCAGTATTTTTTACAGCAGGGAGTCTCAG CATGGTGACACATGGATATGGAGGTTTCACATCATGTCGATGTACATGTTGAAAAGGTTG GATGAGTGCTTGAAGACATTGGAGATGGACCTGCCATTGTCATCAGAGAGTATCGGGGTC ATGGAAAGTCAAACCATATGGGCTGCTCGATCACACATCCTGGTCATGTTGACTGAACTT GATTTCATCGCAGCGATTTATGAGGATGTGGGGCACAACCTACAGCTTGTGTTGCTGGCA CACAAAGCACCACTCAATGCTCTTGTCCGTTGTTCCAAGAGAAATGAGCGTCTACATTGG CTCGTGAAGCATAAGAATCTTCTCTGCTTTGAGGCAAGAAGGAGTTTAGTCTTCATGATG CTGCCTGAAGGGAAGGATGACTTTGGGGAGCTGCATGAGATGTTAATCGATCGATCACAT TTACTTGATGAATCCTTTAATTACATCGCACAGGCAGAACAAGCTGAACTTCACGGTGCG CTGTTTATGGAGTTTAAGAACGAGGAAGCTACAGGTCCTGGTGTCCTGAGGGAATGGTTT TGTTTAGTGTGCCAAGCTCTTTTCAGTCCGAAGCAAGTTCTTTTCTCACCTTGTCCTGAG GATAAACGAAGGTTCTACTTGAACGAAAGTAAGTTTCCCGGGTACTAG

Peptide Sequence

PEP ID	Zm00001d020913_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:7:136282835:136284622:-1 gene:Zm00001d020913 transcript:Zm00001d020913_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:E3 ubiquitin-protein ligase UPL5
Sequence	MSAALACLRRTSKRRRDAPDHALPPLLKQPLMAHAGAEAAESSSSSSASASGVDGASAAA AAASASSPSASPRVVHFFVRATDSRTIAMHAGWDDTVGAVLDHLGACGYGRDLRLLYAGR QLALDSTLAELRLPPDSTLHLLARLRSTQHPHAWQLASHIASTAAIAESEPSRMPSAAFS LDELVKEFILRAHRANLRLSRYDRAATVEDRAAADHTAEYLEIFLQAGAALALVRLYLSK SPFRSYAESAIKCFVPTDPSSLPMDLLIVLLEFCRLLSLAAGRNELLYRSCRRTLASALS TRPKLPPSMNSPTRLIEQVLPFARETVDMVLDGLASMPMIISPSDLDEFSNFLKVMCQQA RRWISDEGPIPSIFYSRESQHGDTWIWRFHIMSMYMLKRLDECLKTLEMDLPLSSESIGV MESQTIWAARSHILVMLTELDFIAAIYEDVGHNLQLVLLAHKAPLNALVRCSKRNERLHW LVKHKNLLCFEARRSLVFMMLPEGKDDFGELHEMLIDRSHLLDESFNYIAQAEQAELHGA LFMEFKNEEATGPGVLREWFCLVCQALFSPKQVLFSPCPEDKRRFYLNESKFPGY

Transcript Sequence

Transcript ID	Zm00001d020913_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:7:136282835:136284622:-1 gene:Zm00001d020913 gene_biotype:protein_coding transcript_biotype:protein_coding description:E3 ubiquitin-protein ligase UPL5
Sequence	ATGTCCGCCGCGCTCGCCTGTCTCCGCCGCACCTCCAAGCGCCGCCGAGACGCGCCCGAT CATGCCCTCCCCCCATTGTTGAAGCAGCCGCTGATGGCCCACGCCGGCGCCGAAGCCGCT GAGTCGTCTTCGTCGTCCTCGGCCTCCGCTTCGGGGGTCGATGGCGCCTCTGCGGCGGCG GCGGCGGCCTCCGCATCGTCGCCCTCCGCGTCGCCCCGGGTGGTGCACTTCTTTGTGCGC GCTACCGATTCCAGAACCATCGCGATGCACGCGGGGTGGGACGACACCGTCGGCGCCGTG CTCGACCACCTCGGCGCCTGTGGGTACGGGCGCGATTTGCGGCTCCTCTACGCGGGACGG CAGCTCGCGCTGGATTCCACCCTCGCTGAGCTCCGCCTCCCGCCGGACTCCACACTTCAC CTTTTGGCGCGTCTCAGGTCCACTCAGCACCCTCACGCGTGGCAGCTCGCATCGCACATC GCCAGCACTGCCGCCATCGCGGAGTCCGAGCCCTCTAGGATGCCCTCCGCCGCCTTCTCC CTCGACGAACTAGTGAAGGAGTTTATCCTCCGCGCCCACCGCGCCAACCTGAGGCTTTCC CGCTACGATCGCGCCGCTACAGTCGAGGACCGGGCCGCGGCGGACCACACCGCCGAGTAC CTCGAAATCTTCCTCCAGGCCGGCGCCGCCTTAGCGCTGGTTCGCCTCTACCTCTCAAAG TCCCCCTTCCGTTCTTACGCCGAGAGTGCCATTAAATGCTTTGTCCCCACGGACCCTTCG TCCTTACCTATGGACTTACTGATCGTGCTGCTTGAATTCTGCCGCTTGCTCTCCTTGGCT GCAGGCAGGAATGAATTACTGTATAGATCATGTCGTCGTACACTTGCCTCAGCTTTATCC ACTCGCCCCAAGCTACCCCCTTCTATGAACTCACCAACCAGGTTGATCGAGCAAGTCCTG CCATTTGCCCGTGAAACAGTGGATATGGTCCTTGATGGGCTTGCATCAATGCCAATGATT ATATCGCCTAGTGATCTAGATGAGTTCTCAAACTTTCTCAAAGTGATGTGCCAGCAGGCA CGCCGTTGGATTTCTGATGAGGGGCCGATACCCAGTATTTTTTACAGCAGGGAGTCTCAG CATGGTGACACATGGATATGGAGGTTTCACATCATGTCGATGTACATGTTGAAAAGGTTG GATGAGTGCTTGAAGACATTGGAGATGGACCTGCCATTGTCATCAGAGAGTATCGGGGTC ATGGAAAGTCAAACCATATGGGCTGCTCGATCACACATCCTGGTCATGTTGACTGAACTT GATTTCATCGCAGCGATTTATGAGGATGTGGGGCACAACCTACAGCTTGTGTTGCTGGCA CACAAAGCACCACTCAATGCTCTTGTCCGTTGTTCCAAGAGAAATGAGCGTCTACATTGG CTCGTGAAGCATAAGAATCTTCTCTGCTTTGAGGCAAGAAGGAGTTTAGTCTTCATGATG CTGCCTGAAGGGAAGGATGACTTTGGGGAGCTGCATGAGATGTTAATCGATCGATCACAT TTACTTGATGAATCCTTTAATTACATCGCACAGGCAGAACAAGCTGAACTTCACGGTGCG CTGTTTATGGAGTTTAAGAACGAGGAAGCTACAGGTCCTGGTGTCCTGAGGGAATGGTTT TGTTTAGTGTGCCAAGCTCTTTTCAGTCCGAAGCAAGTTCTTTTCTCACCTTGTCCTGAG GATAAACGAAGGTTCTACTTGAACGAAAGTAAGTTTCCCGGGTACTAG