Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d020898_T010
CDS Infomation	cds chromosome:B73_RefGen_v4:7:135843219:135846744:1 gene:Zm00001d020898 gene_biotype:protein_coding transcript_biotype:protein_coding description:Heat shock protein 90-2
Sequence	ATGGCGACAGAGACGGAGACCTTCGCCTTTCAGGCTGAGATCAACCAGCTGCTCTCACTC ATCATCAACACCTTCTATTCCAACAAGGAGATCTTCCTCCGGGAGCTCATTTCCAACTCT TCCGATGCGTTGGACAAAATCAGGTTCGAGAGCCTCACTGACAAGAGCAAGCTCGATGCG CAGCCGGAGCTGTTCATCCACATTGTACCAGACAAGGCTTCGAACACGCTCTCCATCATC GACAGCGGCATCGGCATGACCAAGTCCGACCTTGTCAACAACCTCGGTACCATCGCCAGG TCCGGGACCAAGGAGTTCATGGAAGCCCTTGCTGCTGGCGCTGATGTGTCTATGATTGGG CAGTTCGGTGTCGGTTTCTACTCTGCCTACCTCGTCGCCGAGAGGGTCGTCGTGACCACC AAGCATAACGATGACGAGCAGTACGTGTGGGAATCCCAGGCGGGCGGGTCGTTCACTGTT ACTCGTGACACGTCTGGGGAGCAGCTTGGCAGGGGTACTAAGATTACACTTTTCCTCAAG GAAGATCAGTTAGAATACCTTGAGGAGCGTCGCCTCAAGGATTTGGTCAAGAAGCACTCT GAGTTCATCAGCTACCCCATCTCCCTGTGGACCGAAAAGACAACGGAGAAGGAGATTTCT GATGATGAAGATGAGGAAGAGAAGAAAGACGCTGAGGAGGGAAAGGTTGAGGATGTTGAC GAGGAGAAGGAAGAGAAAGAAAAAAAGAAAAAGAAGATCAAGGAGGTTTCTCACGAGTGG TCATTGATCAACAAGCAGAAGCCCATCTGGATGAGGAAGCCAGAAGAGATCACAAAGGAA GAATATGCTGCCTTCTACAAAAGCTTGACAAATGACTGGGAGGAGCATCTGGCTGTGAAG CACTTCTCTGTGGAGGGTCAGCTGGAGTTCAAGGCTGTTCTCTTTGTTCCTAAGAGGGCC CCATTTGATCTCTTCGACACAAGGAAGAAGCAAAACAACATCAAGCTCTATGTGCGCAGG GTGTTTATCATGGACAACTGTGAGGAACTGATCCCTGAGTGGCTGAGTTTTGTTAAGGGT ATTGTTGACTCTGAGGACCTTCCCCTCAATATCTCCCGTGAGACTCTTCAGCAGAACAAG ATCCTGAAGGTGATCCGGAAGAACCTTGTGAAGAAGTGTGTTGAGCTCTTCTTTGAGATT GCTGAAAACAAGGAGGACTACAACAAGTTTTATGAGGCTTTCTCCAAGAACCTCAAGCTT GGCATCCATGAGGACTCGCAGAACAGGGGCAAGATTGCTGAGCTTCTGAGATACCACTCC ACGAAGAGCGGTGATGAGCTGACCAGCCTCAAGGATTATGTGACGAGGATGAAGGAGGGA CAGAACGACATCTACTATATCACTGGTGAGAGCAAGAAGGCAGTGGAGAACTCCCCTTTC CTGGAGAAGCTGAAGAAGAGGGGCTACGAGGTCCTGTACATGGTTGATGCCATTGATGAG TATGCTGTTGGTCAGCTCAAGGAGTTTGAGGGCAAGAAGCTTGTCTCGGCCACCAAGGAG GGTCTGAAGCTTGATGAGACCGAGGATGAGAAGAAGAGGAAGGAGGAGCTGAAGGAGAAG TTTGAGGGTCTGTGCAAGATCATCAAGGAGGTTCTGGGCGACAAGGTTGAGAAGGTTGTG GTGTCTGACCGTGTTGTGGACTCACCGTGCTGCCTTGTCACTGGTGAGTATGGCTGGACA GCCAACATGGAGAGGATCATGAAGGCGCAGGCCCTGAGGGACTCTAGCATGTCGGGGTAC ATGTCGAGCAAAAAGACTATGGAAATCAACCCGGAGAACCCAATCATGGATGAGCTCCGT AAGCGCGCCGAGGCTGACAAGAATGACAAGTCAGTCAAGGATCTTGTGATGTTGCTGTTC GAGACAGCTCTCCTGACCTCCGGCTTCAGCCTGGATGACCCCAACACCTTTGGCACCCGG ATCCATCGCATGCTAAAGCTCGGTCTGAGCATCGATGAGGACAAGTCTGCTGAGGCCGAA GCTGAGATGCCTCCGCTGGAGGATGACGCCGGCGAAAGCAAGATGGAGGAGGTCGACTAA

Peptide Sequence

PEP ID	Zm00001d020898_P010
PEP Infomation	pep chromosome:B73_RefGen_v4:7:135843219:135846744:1 gene:Zm00001d020898 transcript:Zm00001d020898_T010 gene_biotype:protein_coding transcript_biotype:protein_coding description:Heat shock protein 90-2
Sequence	MATETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDA QPELFIHIVPDKASNTLSIIDSGIGMTKSDLVNNLGTIARSGTKEFMEALAAGADVSMIG QFGVGFYSAYLVAERVVVTTKHNDDEQYVWESQAGGSFTVTRDTSGEQLGRGTKITLFLK EDQLEYLEERRLKDLVKKHSEFISYPISLWTEKTTEKEISDDEDEEEKKDAEEGKVEDVD EEKEEKEKKKKKIKEVSHEWSLINKQKPIWMRKPEEITKEEYAAFYKSLTNDWEEHLAVK HFSVEGQLEFKAVLFVPKRAPFDLFDTRKKQNNIKLYVRRVFIMDNCEELIPEWLSFVKG IVDSEDLPLNISRETLQQNKILKVIRKNLVKKCVELFFEIAENKEDYNKFYEAFSKNLKL GIHEDSQNRGKIAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPF LEKLKKRGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDETEDEKKRKEELKEK FEGLCKIIKEVLGDKVEKVVVSDRVVDSPCCLVTGEYGWTANMERIMKAQALRDSSMSGY MSSKKTMEINPENPIMDELRKRAEADKNDKSVKDLVMLLFETALLTSGFSLDDPNTFGTR IHRMLKLGLSIDEDKSAEAEAEMPPLEDDAGESKMEEVD

Transcript Sequence

Transcript ID	Zm00001d020898_T010
Transcript Infomation	cdna chromosome:B73_RefGen_v4:7:135843219:135846744:1 gene:Zm00001d020898 gene_biotype:protein_coding transcript_biotype:protein_coding description:Heat shock protein 90-2
Sequence	CGCGATCCGACAACGCCTCCATCCCTAGCCGACTGCTGCAAGCTTCAGAGCTCAAGAGTC AGGGCGCCATGGCGACAGAGACGGAGACCTTCGCCTTTCAGGCTGAGATCAACCAGCTGC TCTCACTCATCATCAACACCTTCTATTCCAACAAGGAGATCTTCCTCCGGGAGCTCATTT CCAACTCTTCCGATGCGTTGGACAAAATCAGGTTCGAGAGCCTCACTGACAAGAGCAAGC TCGATGCGCAGCCGGAGCTGTTCATCCACATTGTACCAGACAAGGCTTCGAACACGCTCT CCATCATCGACAGCGGCATCGGCATGACCAAGTCCGACCTTGTCAACAACCTCGGTACCA TCGCCAGGTCCGGGACCAAGGAGTTCATGGAAGCCCTTGCTGCTGGCGCTGATGTGTCTA TGATTGGGCAGTTCGGTGTCGGTTTCTACTCTGCCTACCTCGTCGCCGAGAGGGTCGTCG TGACCACCAAGCATAACGATGACGAGCAGTACGTGTGGGAATCCCAGGCGGGCGGGTCGT TCACTGTTACTCGTGACACGTCTGGGGAGCAGCTTGGCAGGGGTACTAAGATTACACTTT TCCTCAAGGAAGATCAGTTAGAATACCTTGAGGAGCGTCGCCTCAAGGATTTGGTCAAGA AGCACTCTGAGTTCATCAGCTACCCCATCTCCCTGTGGACCGAAAAGACAACGGAGAAGG AGATTTCTGATGATGAAGATGAGGAAGAGAAGAAAGACGCTGAGGAGGGAAAGGTTGAGG ATGTTGACGAGGAGAAGGAAGAGAAAGAAAAAAAGAAAAAGAAGATCAAGGAGGTTTCTC ACGAGTGGTCATTGATCAACAAGCAGAAGCCCATCTGGATGAGGAAGCCAGAAGAGATCA CAAAGGAAGAATATGCTGCCTTCTACAAAAGCTTGACAAATGACTGGGAGGAGCATCTGG CTGTGAAGCACTTCTCTGTGGAGGGTCAGCTGGAGTTCAAGGCTGTTCTCTTTGTTCCTA AGAGGGCCCCATTTGATCTCTTCGACACAAGGAAGAAGCAAAACAACATCAAGCTCTATG TGCGCAGGGTGTTTATCATGGACAACTGTGAGGAACTGATCCCTGAGTGGCTGAGTTTTG TTAAGGGTATTGTTGACTCTGAGGACCTTCCCCTCAATATCTCCCGTGAGACTCTTCAGC AGAACAAGATCCTGAAGGTGATCCGGAAGAACCTTGTGAAGAAGTGTGTTGAGCTCTTCT TTGAGATTGCTGAAAACAAGGAGGACTACAACAAGTTTTATGAGGCTTTCTCCAAGAACC TCAAGCTTGGCATCCATGAGGACTCGCAGAACAGGGGCAAGATTGCTGAGCTTCTGAGAT ACCACTCCACGAAGAGCGGTGATGAGCTGACCAGCCTCAAGGATTATGTGACGAGGATGA AGGAGGGACAGAACGACATCTACTATATCACTGGTGAGAGCAAGAAGGCAGTGGAGAACT CCCCTTTCCTGGAGAAGCTGAAGAAGAGGGGCTACGAGGTCCTGTACATGGTTGATGCCA TTGATGAGTATGCTGTTGGTCAGCTCAAGGAGTTTGAGGGCAAGAAGCTTGTCTCGGCCA CCAAGGAGGGTCTGAAGCTTGATGAGACCGAGGATGAGAAGAAGAGGAAGGAGGAGCTGA AGGAGAAGTTTGAGGGTCTGTGCAAGATCATCAAGGAGGTTCTGGGCGACAAGGTTGAGA AGGTTGTGGTGTCTGACCGTGTTGTGGACTCACCGTGCTGCCTTGTCACTGGTGAGTATG GCTGGACAGCCAACATGGAGAGGATCATGAAGGCGCAGGCCCTGAGGGACTCTAGCATGT CGGGGTACATGTCGAGCAAAAAGACTATGGAAATCAACCCGGAGAACCCAATCATGGATG AGCTCCGTAAGCGCGCCGAGGCTGACAAGAATGACAAGTCAGTCAAGGATCTTGTGATGT TGCTGTTCGAGACAGCTCTCCTGACCTCCGGCTTCAGCCTGGATGACCCCAACACCTTTG GCACCCGGATCCATCGCATGCTAAAGCTCGGTCTGAGCATCGATGAGGACAAGTCTGCTG AGGCCGAAGCTGAGATGCCTCCGCTGGAGGATGACGCCGGCGAAAGCAAGATGGAGGAGG TCGACTAAGCTTCGGATCACTGTCGTTTATCCCTAATTACATATGATAAGCTAAATCTTG ACTACTGTTTGAGGTTTTCCGCACGTTAACGGTTCTCCTGCCGGCCAGGCAATGAGTTTG CTGTAGCTATATGGTACTCTGTTTTACAGTTTGTTCTTGTTATCTGTAATCCTACTAGTA TAGTACATGTTCTACATGTCGTTTTGCCTGAGTTCCGG