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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d020874_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:7:135216263:135216865:1 gene:Zm00001d020874 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CCAAT-HAP5-transcription factor 516 description: CCAAT-HAP5-transcription factor 516
Sequence

ATGGATCCTAACAAATCCAGCACCCCGCCGCCGCCTCCAGTCATGGGTGCCCCCGTTGCC
TACCCTCCGCCTGCGTACCCTCCCGGTGTGGCCGCCGGCGCCGGCGCCTACCCGCCGCAG
CTCTACGCACCGCCGGCTGCTGCCGCGGCCCAGCAGGCGGCGGCCGCGCAGCAGCAGCAG
CTGCAGATATTCTGGGCGGAGCAGTACCGCGAGATCGAGGCCACTACCGACTTCAAGAAT
CACAACCTCCCGCTCGCCCGCATCAAGAAGATCATGAAAGCCGACGAGGACGTCCGCATG
ATCGCCGCCGAGGCTCCCGTGGTGTTCGCCCGGGCCTGCGAGATGTTCATCCTCGAGCTC
ACCCATCGCGGCTGGGCGCACGCCGAAGAGAACAAGCGCCGCACGCTCCAGAAATCCGAC
ATTGCCGCTGCCATCGCCCGCACCGAGGTATTCGACTTCCTTGTGGACATCGTTCCGCGC
GACGACGGTAAAGACGCTGATGCGGCGGCCGCCGCAGCTGCCGCGGCTGCCGGGATCCCG
CGCCCCGCCGCCGGAGTACCAGCCACCGACCCTCTCGCCTACTACTACGTGCCTCAGCAG
TAA

Peptide Sequence

PEP ID

Zm00001d020874_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:7:135216263:135216865:1 gene:Zm00001d020874 transcript:Zm00001d020874_T001 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CCAAT-HAP5-transcription factor 516 description: CCAAT-HAP5-transcription factor 516
Sequence

MDPNKSSTPPPPPVMGAPVAYPPPAYPPGVAAGAGAYPPQLYAPPAAAAAQQAAAAQQQQ
LQIFWAEQYREIEATTDFKNHNLPLARIKKIMKADEDVRMIAAEAPVVFARACEMFILEL
THRGWAHAEENKRRTLQKSDIAAAIARTEVFDFLVDIVPRDDGKDADAAAAAAAAAAGIP
RPAAGVPATDPLAYYYVPQQ

Transcript Sequence

Transcript ID

Zm00001d020874_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:7:135216263:135216865:1 gene:Zm00001d020874 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CCAAT-HAP5-transcription factor 516 description: CCAAT-HAP5-transcription factor 516
Sequence

ATGGATCCTAACAAATCCAGCACCCCGCCGCCGCCTCCAGTCATGGGTGCCCCCGTTGCC
TACCCTCCGCCTGCGTACCCTCCCGGTGTGGCCGCCGGCGCCGGCGCCTACCCGCCGCAG
CTCTACGCACCGCCGGCTGCTGCCGCGGCCCAGCAGGCGGCGGCCGCGCAGCAGCAGCAG
CTGCAGATATTCTGGGCGGAGCAGTACCGCGAGATCGAGGCCACTACCGACTTCAAGAAT
CACAACCTCCCGCTCGCCCGCATCAAGAAGATCATGAAAGCCGACGAGGACGTCCGCATG
ATCGCCGCCGAGGCTCCCGTGGTGTTCGCCCGGGCCTGCGAGATGTTCATCCTCGAGCTC
ACCCATCGCGGCTGGGCGCACGCCGAAGAGAACAAGCGCCGCACGCTCCAGAAATCCGAC
ATTGCCGCTGCCATCGCCCGCACCGAGGTATTCGACTTCCTTGTGGACATCGTTCCGCGC
GACGACGGTAAAGACGCTGATGCGGCGGCCGCCGCAGCTGCCGCGGCTGCCGGGATCCCG
CGCCCCGCCGCCGGAGTACCAGCCACCGACCCTCTCGCCTACTACTACGTGCCTCAGCAG
TAA