Plant GARDEN
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d020870_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:7:135138697:135140598:1 gene:Zm00001d020870 gene_biotype:protein_coding transcript_biotype:protein_coding description:Tetratricopeptide repeat (TPR)-like superfamily protein
Sequence

ATGAAAAAGCACCACAAGTTTCTCTTTTTCTTCCACCGCTATATCCATCGCCGAACATCC
AAGCCCTACACCTCGGCAGCTCACCGCGCCGTCCCCATATCCTTCCCCTCCAGCCCCGCC
TCCTCCACCGGCCTTCGCGAACTCGACCTCCTTCACGCGGGCGAGCTCGCGCCGACCCCG
CGCTTATATCACTCCATCATCGCTGCTTGCGCACAGTTCAAGAACCTCGCCGGTGCTCGT
GCCATCCACGCGCACCTGTCCCGCTCCTGCCTCGCGGGCGATGCTTTCCTCCTCAACTCG
CTCATACACATGTATTGCAAATGCGGCGCCGTGTCGGACGCGCGCCACGTGTTCGACAAA
ATGCCCAGCCGGGACGTGGTCTCATGGACCTACCTCATCGCGGGCTATGCACAGAACTAC
ATGCCGGCAGAGGCCATTGGGCTTCTACCCGACATGCTCAGGGCGCGGTTCAGGCCCAAC
GGGTTCACGTTCACCAGCCTCCTCAAGGCCACCGGCGCCTGCGGTGGCTGTAGCATTGGG
GAGCAGATGCATGCTCTGGCTGTGAAGTACAACTGGGATGAGGATGTCTATGTGGGGAGT
GCACTTCTGGACATGTATGCACGGTGTGAACAAATGGACATGGCCATTATGGTGTTTGAC
CGTCTGGTCTCGAAGAACGAGGTGTCTTGGAATGCCCTGATTGCTGGGTTTGCAAGGAAG
GCCGATGGAGAGACCACGTTGATGAAGTTTGCAGAGATGCAGAGGAATGGATTTGGGGCG
ACACACTTTACGTACTCGAGCATGTTCTCTGCATTTGCTCGTATAGGTGCTCTTGAGCAG
GGCAGATGGGTGCATGCACATTTGATTAAGTCTGGGCAGAAACTAACTGCCTTTGTGGGG
AACACTATGCTTGGCATGTATGCAAAGTCCGGGAGCATGGTTGATGCTAGAAAGGTGTTT
GATCGTATGGATAAGAGGGATCTAGTTACTTGGAACACAATGCTCACTGCACTTGCACAG
TATGGTCTTGGAAAGGAAGCAGTCGCTCATTTTGAGGAAATTAGAAAATGTGGCATCCAG
CTTAATCAGATCACCTTCCTTTCTGTCTTGACAGCCTGTAGTCATGGAGGCCTGGTGAAG
GAGGGCAAGCACTACTTTGACATGATGAAAGACTATAATGTGCAGCCTGAGATCGATCAT
TATGTAAGCTTTGTTGATCTTCTTGGTCGAGCTGGCTTATTGAAAGAAGCTCTGATCTTT
GTGTTTAAAATGCCCATGGAACCAACAGCTGCTGTTTGGGGAGCCTTGCTTGGGGCTTGC
AGAATGCATAAGAATGCTAAAATGGGGCAATATGCAGCTGATCATGTCTTTGAACTTGAT
CCAGATGATACTGGTCCACCTGTGCTGTTGTATAACATATACGCTTCTACAGGTAAATGG
AATGATGCTGCTAGAGTGAGGAAGATGATGAAGGCAACTGGTGTAAAGAAGGAGCCTGCA
TGCAGTTGGGTTCAGATCGAGAATTCGGTGCATATGTTTGTGGCAGATGACGATACCCAT
CCGAAATCAGGAGACATATATAGGATGTGGGAGGAGATAAACATGAGAATTAAAAAAGCA
GGATATGTCCCCAATACAGCTCATGTGCTTCTGCATATAAATGAGCAAGAGAGGGAGACA
AAGTTGAAGTACCATAGCGAGAAGATTGCACTTGCATTTGCGTTGATCAACATGCCTGCA
GGGGCATCAATTCGGATCATGAAGAATATTAGGATATGTGGGGATTGCCATTCTGCATTC
AAATATGTCTCCAAAGTATTCAAAAGAGAGATTGTTGTGAGGGACACTAACAGGTTCCAC
CATTTCAGCGAAGGCTCTTGTTCCTGTGGAGATTATTGGTGA

Peptide Sequence

PEP ID

Zm00001d020870_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:7:135138697:135140598:1 gene:Zm00001d020870 transcript:Zm00001d020870_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Tetratricopeptide repeat (TPR)-like superfamily protein
Sequence

MKKHHKFLFFFHRYIHRRTSKPYTSAAHRAVPISFPSSPASSTGLRELDLLHAGELAPTP
RLYHSIIAACAQFKNLAGARAIHAHLSRSCLAGDAFLLNSLIHMYCKCGAVSDARHVFDK
MPSRDVVSWTYLIAGYAQNYMPAEAIGLLPDMLRARFRPNGFTFTSLLKATGACGGCSIG
EQMHALAVKYNWDEDVYVGSALLDMYARCEQMDMAIMVFDRLVSKNEVSWNALIAGFARK
ADGETTLMKFAEMQRNGFGATHFTYSSMFSAFARIGALEQGRWVHAHLIKSGQKLTAFVG
NTMLGMYAKSGSMVDARKVFDRMDKRDLVTWNTMLTALAQYGLGKEAVAHFEEIRKCGIQ
LNQITFLSVLTACSHGGLVKEGKHYFDMMKDYNVQPEIDHYVSFVDLLGRAGLLKEALIF
VFKMPMEPTAAVWGALLGACRMHKNAKMGQYAADHVFELDPDDTGPPVLLYNIYASTGKW
NDAARVRKMMKATGVKKEPACSWVQIENSVHMFVADDDTHPKSGDIYRMWEEINMRIKKA
GYVPNTAHVLLHINEQERETKLKYHSEKIALAFALINMPAGASIRIMKNIRICGDCHSAF
KYVSKVFKREIVVRDTNRFHHFSEGSCSCGDYW

Transcript Sequence

Transcript ID

Zm00001d020870_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:7:135138697:135140598:1 gene:Zm00001d020870 gene_biotype:protein_coding transcript_biotype:protein_coding description:Tetratricopeptide repeat (TPR)-like superfamily protein
Sequence

ATGAAAAAGCACCACAAGTTTCTCTTTTTCTTCCACCGCTATATCCATCGCCGAACATCC
AAGCCCTACACCTCGGCAGCTCACCGCGCCGTCCCCATATCCTTCCCCTCCAGCCCCGCC
TCCTCCACCGGCCTTCGCGAACTCGACCTCCTTCACGCGGGCGAGCTCGCGCCGACCCCG
CGCTTATATCACTCCATCATCGCTGCTTGCGCACAGTTCAAGAACCTCGCCGGTGCTCGT
GCCATCCACGCGCACCTGTCCCGCTCCTGCCTCGCGGGCGATGCTTTCCTCCTCAACTCG
CTCATACACATGTATTGCAAATGCGGCGCCGTGTCGGACGCGCGCCACGTGTTCGACAAA
ATGCCCAGCCGGGACGTGGTCTCATGGACCTACCTCATCGCGGGCTATGCACAGAACTAC
ATGCCGGCAGAGGCCATTGGGCTTCTACCCGACATGCTCAGGGCGCGGTTCAGGCCCAAC
GGGTTCACGTTCACCAGCCTCCTCAAGGCCACCGGCGCCTGCGGTGGCTGTAGCATTGGG
GAGCAGATGCATGCTCTGGCTGTGAAGTACAACTGGGATGAGGATGTCTATGTGGGGAGT
GCACTTCTGGACATGTATGCACGGTGTGAACAAATGGACATGGCCATTATGGTGTTTGAC
CGTCTGGTCTCGAAGAACGAGGTGTCTTGGAATGCCCTGATTGCTGGGTTTGCAAGGAAG
GCCGATGGAGAGACCACGTTGATGAAGTTTGCAGAGATGCAGAGGAATGGATTTGGGGCG
ACACACTTTACGTACTCGAGCATGTTCTCTGCATTTGCTCGTATAGGTGCTCTTGAGCAG
GGCAGATGGGTGCATGCACATTTGATTAAGTCTGGGCAGAAACTAACTGCCTTTGTGGGG
AACACTATGCTTGGCATGTATGCAAAGTCCGGGAGCATGGTTGATGCTAGAAAGGTGTTT
GATCGTATGGATAAGAGGGATCTAGTTACTTGGAACACAATGCTCACTGCACTTGCACAG
TATGGTCTTGGAAAGGAAGCAGTCGCTCATTTTGAGGAAATTAGAAAATGTGGCATCCAG
CTTAATCAGATCACCTTCCTTTCTGTCTTGACAGCCTGTAGTCATGGAGGCCTGGTGAAG
GAGGGCAAGCACTACTTTGACATGATGAAAGACTATAATGTGCAGCCTGAGATCGATCAT
TATGTAAGCTTTGTTGATCTTCTTGGTCGAGCTGGCTTATTGAAAGAAGCTCTGATCTTT
GTGTTTAAAATGCCCATGGAACCAACAGCTGCTGTTTGGGGAGCCTTGCTTGGGGCTTGC
AGAATGCATAAGAATGCTAAAATGGGGCAATATGCAGCTGATCATGTCTTTGAACTTGAT
CCAGATGATACTGGTCCACCTGTGCTGTTGTATAACATATACGCTTCTACAGGTAAATGG
AATGATGCTGCTAGAGTGAGGAAGATGATGAAGGCAACTGGTGTAAAGAAGGAGCCTGCA
TGCAGTTGGGTTCAGATCGAGAATTCGGTGCATATGTTTGTGGCAGATGACGATACCCAT
CCGAAATCAGGAGACATATATAGGATGTGGGAGGAGATAAACATGAGAATTAAAAAAGCA
GGATATGTCCCCAATACAGCTCATGTGCTTCTGCATATAAATGAGCAAGAGAGGGAGACA
AAGTTGAAGTACCATAGCGAGAAGATTGCACTTGCATTTGCGTTGATCAACATGCCTGCA
GGGGCATCAATTCGGATCATGAAGAATATTAGGATATGTGGGGATTGCCATTCTGCATTC
AAATATGTCTCCAAAGTATTCAAAAGAGAGATTGTTGTGAGGGACACTAACAGGTTCCAC
CATTTCAGCGAAGGCTCTTGTTCCTGTGGAGATTATTGGTGA