Gene sequences

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SNP Detection
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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d020858_T003
CDS Infomation	cds chromosome:B73_RefGen_v4:7:134901646:134904738:1 gene:Zm00001d020858 gene_biotype:protein_coding transcript_biotype:protein_coding description:Serine/threonine-protein kinase D6PKL1
Sequence	ATGGCTGGCCAGACGTCAAAGGCAAAGGAAGCAGGAAAAGATGACAGAGAAGAACCCGGA GCTGAGGCGGCGAAAGAGAAGTTAGTGCCGTCTCACCAGCAGCAAGAGTCTCCAGCTTCT GTGGTGGACAAGGATTCTTCAGGTGTGTCTTCAGTTCCTGGTGATGAGTCACCGGTCCTA GAAGGGGATTCTGTTGAGTTGAAAGTGGAGGAAAACTTGGATGGTAATGGGAATAAGGAA AATAAAACGTCCCAGAAGAGCAGTACAAGTGATGGCTTTGCTTCTGCTAAAGTGAGTGAT GGGACAAGTAGTTTGAGGAAGACCAGTGGTAGTGTGGCCATGAGTACTCGGGCTGATTTC ACTGAGAGTGGGAAGAGCAGCATGTGCCGTGCGAGCACCGCCAGTGACATTAGCGATGAG AGCTCCTGCAGCAGCATGAGCAGTGCCACCACGAAGCCACACAAGGGGAATGATTCAAGG TGGGAGGCTATCCATGTGGTGAAGTCCAGGGATAAAGTTCTTGGACTGAATCATTTCAGG CTGCTTAAGAAGTTGGGCTCTGGTGATATAGGAAGTGTGTACCTATCTGAATTGAGTGGT ACACGGAGTTACTTTGCCATGAAGGTTATGGATAAGACTTCTTTGGCAAGTCGGAAGAAG CTGCTTCGAGCTCAGACCGAGCGGGAGATCCTGCAGTCCCTGGACCATCCATTTCTACCA ACCCTGTATACTCACTTTGAGACAGATAAGTTTTCATGCTTGGTTATGGAATTCTGCCCT GGAGGGGACCTTCACACTCTTCGCCAAAGGCAGCCTGGAAAATATTTTTCAGAGCAAGCA GCAAAGTTCTACGTAGCTGAGGTGCTCCTTGCATTGGAATACCTGCATATGCTTGGGATT ATATACCGTGATCTCAAACCAGAAAATGTCCTCGTTCGGGAAGATGGCCACATCATGCTG TCGGACTTCGATCTATCTCTTCGCTGTTCAGTGAGCCTAACGGTGATCAAGTCCGCAAAT CCTGGCCTAGATGCATTGCAGAGGAACAATGCAGCGTACTGTGCCCAGCCTGCTTGCATC GAACCATCCTGCATTCAGCCCTCCTGTGTAGCTCCAACCACTTGCTTTGGCCCCCGGTTC TTCTCCAAATCCAAGTCCAAGTCTAAGTCCAAGCCCAAGAAGGAGAAGTCGAAGCCTGAT GGTCCAAACCAAGAGAACCTCTTCCCGGAGCTGATTGCTGAGCCAACTGATGCTCGCTCG ATGTCCTTTGTTGGCACTCATGAGTACTTGGCCCCAGAAATAATAAAAGGGGAGGGCCAT GGAAGTGCTGTGGATTGGTGGACCTTTGGCATATTCTTGTACGAGCTGTTGTTCGGCAAG ACCCCTTTCAAAGGTTCCGGCAACCGGGCTACACTCTTCAACGTCGTGGGCCAGCCCTTG AGGTTCCCGGAGTCCCCGATAGTGAGCTTCTCTGCGAGGGACATGATAAGGGGATTGCTC GTCAAGGACCCGCAGCACCGGCTCGGGTACAAGCGTGGTGCTACCGAGATAAAGCAGCAC CCTTTCTTCGAGGGCGTGAACTGGGCTCTCATAAGGTGCGCGAGCCCTCCGGACATACCA AAGCCCCTCGAGCTCGAGTGTCGCCCAAAGCAAGTGCCATCAGCAAACGGAAAGGTCGCG CCGGTCGCTAACCAAAAGGGCCCAGATAATTATCTAGAGTTCGAATTCTTCTAG

Peptide Sequence

PEP ID	Zm00001d020858_P003
PEP Infomation	pep chromosome:B73_RefGen_v4:7:134901646:134904738:1 gene:Zm00001d020858 transcript:Zm00001d020858_T003 gene_biotype:protein_coding transcript_biotype:protein_coding description:Serine/threonine-protein kinase D6PKL1
Sequence	MAGQTSKAKEAGKDDREEPGAEAAKEKLVPSHQQQESPASVVDKDSSGVSSVPGDESPVL EGDSVELKVEENLDGNGNKENKTSQKSSTSDGFASAKVSDGTSSLRKTSGSVAMSTRADF TESGKSSMCRASTASDISDESSCSSMSSATTKPHKGNDSRWEAIHVVKSRDKVLGLNHFR LLKKLGSGDIGSVYLSELSGTRSYFAMKVMDKTSLASRKKLLRAQTEREILQSLDHPFLP TLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAAKFYVAEVLLALEYLHMLGI IYRDLKPENVLVREDGHIMLSDFDLSLRCSVSLTVIKSANPGLDALQRNNAAYCAQPACI EPSCIQPSCVAPTTCFGPRFFSKSKSKSKSKPKKEKSKPDGPNQENLFPELIAEPTDARS MSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQPL RFPESPIVSFSARDMIRGLLVKDPQHRLGYKRGATEIKQHPFFEGVNWALIRCASPPDIP KPLELECRPKQVPSANGKVAPVANQKGPDNYLEFEFF

Transcript Sequence

Transcript ID	Zm00001d020858_T003
Transcript Infomation	cdna chromosome:B73_RefGen_v4:7:134901646:134904738:1 gene:Zm00001d020858 gene_biotype:protein_coding transcript_biotype:protein_coding description:Serine/threonine-protein kinase D6PKL1
Sequence	CTTCTTTTTTTTTTCCCGGTGGGGAGAAAAGCGGGGGCAGCGAGTTGTGCGCCTTCGTGG CCAATTGATCTTTCAGATCAGGAGCTGGGGATTGCCCTGCCACTCTGCTGAAAGTTTTGG AGAAGTTGTGGTGTTTCCCTGCCTATTAGAGTCTGCGCTTCTGTGTTCCTGATCAACTGC TACTACGCGATTGTTGTCTTCTCAATCTGTCTGGCCAAGCATGGCTGGCCAGACGTCAAA GGCAAAGGAAGCAGGAAAAGATGACAGAGAAGAACCCGGAGCTGAGGCGGCGAAAGAGAA GTTAGTGCCGTCTCACCAGCAGCAAGAGTCTCCAGCTTCTGTGGTGGACAAGGATTCTTC AGGTGTGTCTTCAGTTCCTGGTGATGAGTCACCGGTCCTAGAAGGGGATTCTGTTGAGTT GAAAGTGGAGGAAAACTTGGATGGTAATGGGAATAAGGAAAATAAAACGTCCCAGAAGAG CAGTACAAGTGATGGCTTTGCTTCTGCTAAAGTGAGTGATGGGACAAGTAGTTTGAGGAA GACCAGTGGTAGTGTGGCCATGAGTACTCGGGCTGATTTCACTGAGAGTGGGAAGAGCAG CATGTGCCGTGCGAGCACCGCCAGTGACATTAGCGATGAGAGCTCCTGCAGCAGCATGAG CAGTGCCACCACGAAGCCACACAAGGGGAATGATTCAAGGTGGGAGGCTATCCATGTGGT GAAGTCCAGGGATAAAGTTCTTGGACTGAATCATTTCAGGCTGCTTAAGAAGTTGGGCTC TGGTGATATAGGAAGTGTGTACCTATCTGAATTGAGTGGTACACGGAGTTACTTTGCCAT GAAGGTTATGGATAAGACTTCTTTGGCAAGTCGGAAGAAGCTGCTTCGAGCTCAGACCGA GCGGGAGATCCTGCAGTCCCTGGACCATCCATTTCTACCAACCCTGTATACTCACTTTGA GACAGATAAGTTTTCATGCTTGGTTATGGAATTCTGCCCTGGAGGGGACCTTCACACTCT TCGCCAAAGGCAGCCTGGAAAATATTTTTCAGAGCAAGCAGCAAAGTTCTACGTAGCTGA GGTGCTCCTTGCATTGGAATACCTGCATATGCTTGGGATTATATACCGTGATCTCAAACC AGAAAATGTCCTCGTTCGGGAAGATGGCCACATCATGCTGTCGGACTTCGATCTATCTCT TCGCTGTTCAGTGAGCCTAACGGTGATCAAGTCCGCAAATCCTGGCCTAGATGCATTGCA GAGGAACAATGCAGCGTACTGTGCCCAGCCTGCTTGCATCGAACCATCCTGCATTCAGCC CTCCTGTGTAGCTCCAACCACTTGCTTTGGCCCCCGGTTCTTCTCCAAATCCAAGTCCAA GTCTAAGTCCAAGCCCAAGAAGGAGAAGTCGAAGCCTGATGGTCCAAACCAAGAGAACCT CTTCCCGGAGCTGATTGCTGAGCCAACTGATGCTCGCTCGATGTCCTTTGTTGGCACTCA TGAGTACTTGGCCCCAGAAATAATAAAAGGGGAGGGCCATGGAAGTGCTGTGGATTGGTG GACCTTTGGCATATTCTTGTACGAGCTGTTGTTCGGCAAGACCCCTTTCAAAGGTTCCGG CAACCGGGCTACACTCTTCAACGTCGTGGGCCAGCCCTTGAGGTTCCCGGAGTCCCCGAT AGTGAGCTTCTCTGCGAGGGACATGATAAGGGGATTGCTCGTCAAGGACCCGCAGCACCG GCTCGGGTACAAGCGTGGTGCTACCGAGATAAAGCAGCACCCTTTCTTCGAGGGCGTGAA CTGGGCTCTCATAAGGTGCGCGAGCCCTCCGGACATACCAAAGCCCCTCGAGCTCGAGTG TCGCCCAAAGCAAGTGCCATCAGCAAACGGAAAGGTCGCGCCGGTCGCTAACCAAAAGGG CCCAGATAATTATCTAGAGTTCGAATTCTTCTAGTTTTTTGTTTTGTTTTTGTTTTTGTG ATTTCTGAACTGCAAGAGTGCGTCTGGGCTGATGCTGTGAAAGAAAGTGAAAGATGATAA CCTACTCTAGGCATGCGCTTCGCTGGATTTTTTTCTTCTTCTGCCATTAGACTGTACTAC GCTCGTTTCAGGATATCCGAGTTATTTTTTTTTCTCTGTTGAACTGCTTAACTCTAAGGT GTACTCAATCCATCATGTATGTTGCAATTTTCAGAACCTGCCTATGGTACTTGAAATGTA TTTCAGGGCT