Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d020827_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:7:134001581:134006410:-1 gene:Zm00001d020827 gene_biotype:protein_coding transcript_biotype:protein_coding description:Heat shock protein 90-5 chloroplastic
Sequence	ATGGCGCCGGCGCTGAGCAGGACCCTGGGGCCGTCGTCGGTGGCCGCGCTGCGCCCGAGC CCGTCGTGCCGGGGTCTGTTACGGGCCGCGCTCGCGCCGCAGGGCAGGGGCGCCTCCGCG AGGTGCGCGGTAGGGGTGAGATGGGAGGCAGCCAGGCGGAGGAGGATGGCCGGGGTGAGG TGCGACGCCGCCGTCGCTGAGAAGCCTGCCGGCGAGGAGGAGACGGCCGGCGAGAAGTAC GAGTACCAGGCTGAGGTTACCCGCTTGATGGACTTAATTGTACACAGTTTATACAGCCAC AAGGAAGTATTTTTACGTGAGCTTGTAAGTAACGCGAGTGATGCACTGGATAAGCTGAGA TTCCTCAGCGTAACTGATCCTTCTGTGTTGGCTGATGGCGGTGAGTTGGAGATAAGGATT AAACCCGACCTAGAGGCGGGGACAATCACTATCACAGATACTGGCATTGGAATGACTAAA GATGAGCTCAAAGACTGTCTTGGAACCATTGCACAAAGTGGCACCTCAAAGTTTTTGAAG GCTCTAAAGGAGAACAAAGACCTTGGTGCAGATAATGGACTCATTGGTCAATTCGGTGTT GGGTTCTATTCCGCTTTCCTTGTTGCAGAGAGGGTTGTGGTGTCTACTAAAAGTCCAAAG GCAGATAAGCAGTATGTGTGGGAAGCAGAGGCTGACAGCAGCTCGTATGTTATCAAGGAA GAAAATGATCCTGAGAAAATGCTTTCACGTGGAACAGAAATTACTCTTTATTTGAGAGAT GATGACAAATATGAGTTTGCTGACCCTACCAGGATTCAAGGCTTAGTTAAGAACTACTCG CAGTTTGTCTCATTCCCCATATATACATGGCAGGAAAAATCAAGAACAGTTGAGGTTGAA GAGGAGGAAGAATCAAAAGGTGAAGAGGCTACTGAAGAATCAAAAAGTGAAGAGGCTACT GAGGGTGAAAAGCAGAAAAAGAAGAAAACCATAACTGAGAAGTACTGGGACTGGGAATTG GCTAATGAAACGAAGCCCATATGGATGAGGAATCCAAAGGAAGTTGAGAAAACTGAGTAC AATGAATTCTACAAGAAGACATTTAATGAGTTTCTGGATCCGCTTGCTTACACTCACTTC ACCACTGAGGGAGAGGTGGAATTTCGGAGTGTTCTCTATGTCCCAGGGATGGCGCCTCTT AGTAATGAGGAGATAATGAATCCAAAGACCAAAAACATCCGATTGTATGTCAAAAGAGTG TTCATATCAGATGATTTTGATGGCGAGCTGTTTCCCAGATACTTGAGCTTTGTGAAAGGT GTAGTTGACTCAAATGATCTCCCTCTCAATGTTTCTCGTGAGATCCTTCAAGAAAGTAGA ATTGTCAGAATTATGCGTAAGAGACTTGTTAGGAAGACATTTGACATGATTCAAGAGATT GCCGAGAAGGATGGCAAAGAGGACTACAACAAATTCTGGGAGAGCTTTGGCAAGTTCATG AAGCTTGGTTGCATCGAGGACACAGGAAACCACAAGCGTCTTGCACCATTGCTGAGATTC TACTCTTCCAAAAACGAGACAGATTTAATAAGTCTGGACCAGTATGTAGAAAACATGCCT GAAAACCAGAAGGCGATCTATTATATCGCTACTGATAGTCTCCAGAGCGCGAAGACTGCT CCTTTCTTGGAAAAGCTGGTTCAGAAAGATATTGAGGTTCTTTACCTCATTGAGCCAATT GATGAGGTTGCCATTCAGAATTTACAGACATACAAAGAGAAGAAGTTTGTAGATATTAGC AAAGAGGATTTGGAATTGGGTGATGAAGATGAGGACAAGGAGAAAGAAAGCAAGCAGGAG TATACTCTTCTATGCGACTGGATAAAGCAGCAGCTTGGCGATAAAGTCGCCAAGGTCCAG ATCTCGAAGCGACTCAGCTCTTCTCCATGTGTTCTTGTTTCTGGTAAATTTGGCTGGTCA GCCAACATGGAAAGGCTCATGAAGGCACAGACCCTTGGTGACACATCAAGCCTGGAGTTC ATGAGAGGTAGACGAATTTTTGAGATCAACCCTGACCATCCTATCATCAAGGACCTGAAC GCTGCTTGCAAAAACGAGCCTGAAAGTACTGAAGCCAAGAGGGCGGCAGAGTTGCTATAC GAGGCTGCGCTGATCTCCAGTGGGTATACTCCTGACAGTCCAGCGGAGCTGGGAGGCAAG ATCTACGAGATGATGACCATGGCCCTCGGCGGGAGATGGGGGAGGTTGGAGACAGAGGAG GCTGAAGTCATCGCCAGCATCGACGACGCGGACTCGTCTGAAGGTGCCACGACCACGACA GAGGTAGTCGAGCCCTCTGAGGTCAGGACAGAGAGCGACCCGTGGAAGGATTAG

Peptide Sequence

PEP ID	Zm00001d020827_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:7:134001581:134006410:-1 gene:Zm00001d020827 transcript:Zm00001d020827_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Heat shock protein 90-5 chloroplastic
Sequence	MAPALSRTLGPSSVAALRPSPSCRGLLRAALAPQGRGASARCAVGVRWEAARRRRMAGVR CDAAVAEKPAGEEETAGEKYEYQAEVTRLMDLIVHSLYSHKEVFLRELVSNASDALDKLR FLSVTDPSVLADGGELEIRIKPDLEAGTITITDTGIGMTKDELKDCLGTIAQSGTSKFLK ALKENKDLGADNGLIGQFGVGFYSAFLVAERVVVSTKSPKADKQYVWEAEADSSSYVIKE ENDPEKMLSRGTEITLYLRDDDKYEFADPTRIQGLVKNYSQFVSFPIYTWQEKSRTVEVE EEEESKGEEATEESKSEEATEGEKQKKKKTITEKYWDWELANETKPIWMRNPKEVEKTEY NEFYKKTFNEFLDPLAYTHFTTEGEVEFRSVLYVPGMAPLSNEEIMNPKTKNIRLYVKRV FISDDFDGELFPRYLSFVKGVVDSNDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQEI AEKDGKEDYNKFWESFGKFMKLGCIEDTGNHKRLAPLLRFYSSKNETDLISLDQYVENMP ENQKAIYYIATDSLQSAKTAPFLEKLVQKDIEVLYLIEPIDEVAIQNLQTYKEKKFVDIS KEDLELGDEDEDKEKESKQEYTLLCDWIKQQLGDKVAKVQISKRLSSSPCVLVSGKFGWS ANMERLMKAQTLGDTSSLEFMRGRRIFEINPDHPIIKDLNAACKNEPESTEAKRAAELLY EAALISSGYTPDSPAELGGKIYEMMTMALGGRWGRLETEEAEVIASIDDADSSEGATTTT EVVEPSEVRTESDPWKD

Transcript Sequence

Transcript ID	Zm00001d020827_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:7:134001581:134006410:-1 gene:Zm00001d020827 gene_biotype:protein_coding transcript_biotype:protein_coding description:Heat shock protein 90-5 chloroplastic
Sequence	ACGCAACGTCCCCACCACAACACACGCCAGCCCCGTGCGCCCTACGCGATTCTAGAAGCC TCCGGGCTCCCCGCATCGCCTCCCCACCCCCATGTCTCCCAGTCCCTGTACCTCCGTATA AACCCTAGTACCTCTTATCCGTTCGTCACTCCCCAAGCGTCACACCGAATCACCACAGTC GAGCTCGAGCAGGAACAAGCCGTGAGCGCCTGCCCCCGGTGCTCAATATCTATTCCACAC CTCATGGCGCCGGCGCTGAGCAGGACCCTGGGGCCGTCGTCGGTGGCCGCGCTGCGCCCG AGCCCGTCGTGCCGGGGTCTGTTACGGGCCGCGCTCGCGCCGCAGGGCAGGGGCGCCTCC GCGAGGTGCGCGGTAGGGGTGAGATGGGAGGCAGCCAGGCGGAGGAGGATGGCCGGGGTG AGGTGCGACGCCGCCGTCGCTGAGAAGCCTGCCGGCGAGGAGGAGACGGCCGGCGAGAAG TACGAGTACCAGGCTGAGGTTACCCGCTTGATGGACTTAATTGTACACAGTTTATACAGC CACAAGGAAGTATTTTTACGTGAGCTTGTAAGTAACGCGAGTGATGCACTGGATAAGCTG AGATTCCTCAGCGTAACTGATCCTTCTGTGTTGGCTGATGGCGGTGAGTTGGAGATAAGG ATTAAACCCGACCTAGAGGCGGGGACAATCACTATCACAGATACTGGCATTGGAATGACT AAAGATGAGCTCAAAGACTGTCTTGGAACCATTGCACAAAGTGGCACCTCAAAGTTTTTG AAGGCTCTAAAGGAGAACAAAGACCTTGGTGCAGATAATGGACTCATTGGTCAATTCGGT GTTGGGTTCTATTCCGCTTTCCTTGTTGCAGAGAGGGTTGTGGTGTCTACTAAAAGTCCA AAGGCAGATAAGCAGTATGTGTGGGAAGCAGAGGCTGACAGCAGCTCGTATGTTATCAAG GAAGAAAATGATCCTGAGAAAATGCTTTCACGTGGAACAGAAATTACTCTTTATTTGAGA GATGATGACAAATATGAGTTTGCTGACCCTACCAGGATTCAAGGCTTAGTTAAGAACTAC TCGCAGTTTGTCTCATTCCCCATATATACATGGCAGGAAAAATCAAGAACAGTTGAGGTT GAAGAGGAGGAAGAATCAAAAGGTGAAGAGGCTACTGAAGAATCAAAAAGTGAAGAGGCT ACTGAGGGTGAAAAGCAGAAAAAGAAGAAAACCATAACTGAGAAGTACTGGGACTGGGAA TTGGCTAATGAAACGAAGCCCATATGGATGAGGAATCCAAAGGAAGTTGAGAAAACTGAG TACAATGAATTCTACAAGAAGACATTTAATGAGTTTCTGGATCCGCTTGCTTACACTCAC TTCACCACTGAGGGAGAGGTGGAATTTCGGAGTGTTCTCTATGTCCCAGGGATGGCGCCT CTTAGTAATGAGGAGATAATGAATCCAAAGACCAAAAACATCCGATTGTATGTCAAAAGA GTGTTCATATCAGATGATTTTGATGGCGAGCTGTTTCCCAGATACTTGAGCTTTGTGAAA GGTGTAGTTGACTCAAATGATCTCCCTCTCAATGTTTCTCGTGAGATCCTTCAAGAAAGT AGAATTGTCAGAATTATGCGTAAGAGACTTGTTAGGAAGACATTTGACATGATTCAAGAG ATTGCCGAGAAGGATGGCAAAGAGGACTACAACAAATTCTGGGAGAGCTTTGGCAAGTTC ATGAAGCTTGGTTGCATCGAGGACACAGGAAACCACAAGCGTCTTGCACCATTGCTGAGA TTCTACTCTTCCAAAAACGAGACAGATTTAATAAGTCTGGACCAGTATGTAGAAAACATG CCTGAAAACCAGAAGGCGATCTATTATATCGCTACTGATAGTCTCCAGAGCGCGAAGACT GCTCCTTTCTTGGAAAAGCTGGTTCAGAAAGATATTGAGGTTCTTTACCTCATTGAGCCA ATTGATGAGGTTGCCATTCAGAATTTACAGACATACAAAGAGAAGAAGTTTGTAGATATT AGCAAAGAGGATTTGGAATTGGGTGATGAAGATGAGGACAAGGAGAAAGAAAGCAAGCAG GAGTATACTCTTCTATGCGACTGGATAAAGCAGCAGCTTGGCGATAAAGTCGCCAAGGTC CAGATCTCGAAGCGACTCAGCTCTTCTCCATGTGTTCTTGTTTCTGGTAAATTTGGCTGG TCAGCCAACATGGAAAGGCTCATGAAGGCACAGACCCTTGGTGACACATCAAGCCTGGAG TTCATGAGAGGTAGACGAATTTTTGAGATCAACCCTGACCATCCTATCATCAAGGACCTG AACGCTGCTTGCAAAAACGAGCCTGAAAGTACTGAAGCCAAGAGGGCGGCAGAGTTGCTA TACGAGGCTGCGCTGATCTCCAGTGGGTATACTCCTGACAGTCCAGCGGAGCTGGGAGGC AAGATCTACGAGATGATGACCATGGCCCTCGGCGGGAGATGGGGGAGGTTGGAGACAGAG GAGGCTGAAGTCATCGCCAGCATCGACGACGCGGACTCGTCTGAAGGTGCCACGACCACG ACAGAGGTAGTCGAGCCCTCTGAGGTCAGGACAGAGAGCGACCCGTGGAAGGATTAGATA GTTCTGTATGCAAGGATTATGCCCTGGTGTGGTGTATGAGCACTGGATGTAACGAAAGTA CGAACCAGAGCCAGGATAGAGGAATGCAGCGTTTGATAAGAACACTGGTGTTAAAAGTGT AGATCTCTGGTTTGGGTTGTGCTGATAAATTTTTGTAGGCTATAACCATCCAATGAAAAA TGCCCTCTGCGCTTTCGTGCATT