Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d020821_T022
CDS Infomation	cds chromosome:B73_RefGen_v4:7:133912304:133927085:-1 gene:Zm00001d020821 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat-containing protein
Sequence	ATGCAGAAACTTGGATTGCAACCAACAAGTTATACATATGACGGTTTTATTAAAACCGTG ATAGCTGGGAAAGGAATTGCATATGCCAACAAAGTGATTAACGCCATGGAGAGAAGGGGC ATTGAACCTTACAGTGATACACTTGCTGCTCTCTCAGAGGGTCATAGCAATAGTTTACAG TTGGATTTGGCTGAGGAGTTTTTGGAAAGAATTTCAGAGATAAAACCAAAGCATATAGGT TCCTTTAATGCTTTGCTTTCTGGATGTGCGATTATGAATGAACCAGAAAGAGCTGTCCGC ATACTAGCTAAAATGAAACATGTGAACATGAAGCCAACTCTCAGGACATATGAACTTTTG TTTTCTCTGTTTGGAAATGTAAATGTTCCTTATGAACAAGGAGATGTGCTCTCTCATGTC GATGTTTCCAAAAGGATAAGTATCATTGAGATGGACATGTTTAACAATGGAATCCAACAC AGCTTTGTGTCCATGAAGAACTTGAACACAATTTTCAGGATAATCAAGACCCCTTTTTTT GAGTCTGTGGGCTGTCCAACATTTATTGTTTATAGCAAGCCATACAAAGACCTTACACTT AGGGGCTGCCCAGCTCTTCCAAATTCTTTTCCAAGGCTCAAAGGATTCCGCTCCAATATA CGAGCTTTTGGAGCTGAGGGGATGATAGAGGAAATGCTGAGGTACCTGAATATAGCAGAA AATACTCTGTGGAACATAAATCCTCATCAGAAGAGTGATCTCTACAGCACTGCGTTGCAT GCTCTGGTTGATGTGAAGGAAACTCACAGAGCAGTAAAGATGTTCAAAATCATGAGATCA TGCAGTCTTCCAACTAATATTTCAATTTATAATACCATGATAGAGTGCTGCAAATGGCTG CCATGCTTCAAATCAGCTAGTGCTTTGCTGTCTTTGATGCTTCGAGATGGTTTCAATCCT ACGGTTGTGACTTTTACATCACTCCTGAAGGTTGTATTAGAAAATGATAATTTTGAAGGG GCTCTGGATCTGCTTGATATATGCAAGATTGAAGGACTTCAGCCTGGCATACAGACTTTC AACACAGTACTCTTACGTGCATATGCTAGAGGTCAAATTCATGTCCTTGAATATATTTTG GAGTGTATACATCGATCAAAAATCCAACCTGATCCATCAACACTTTGGTACACGTTTTGT GCCTACGAGGAGCATGAACTGTACAATACTGCAATTGAGTCATTGCTAGTCCTCAGCATG AGAATGATATCTGAGGATGCCGGCATTCCTAGTGAGAAAAGAATTGTTTTTGAAGATCTA ATCCTCAGTGAAGAACCTGATGCTGAATTCAGGATCATAAGGGCATTCCAAGCAGGCGAA GAATTCCTTGCGACAGCTTTACTGAACCTAAGATGGTGTGCCACAATGGGTGCCACCGTA TCTTGGTCACCGGAGGAGAGTCTTTGGGCAATGAGGCTGGCAGCCTCGTATGATGCTAAC AAGAGACCACATATAAACCCCTCGGATGCTCCCAAATCTTGGGGAAGGAATCCACTTAAC CGCCCGTATTGGGAGGCTAACGGGTGA

Peptide Sequence

PEP ID	Zm00001d020821_P022
PEP Infomation	pep chromosome:B73_RefGen_v4:7:133912304:133927085:-1 gene:Zm00001d020821 transcript:Zm00001d020821_T022 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat-containing protein
Sequence	MQKLGLQPTSYTYDGFIKTVIAGKGIAYANKVINAMERRGIEPYSDTLAALSEGHSNSLQ LDLAEEFLERISEIKPKHIGSFNALLSGCAIMNEPERAVRILAKMKHVNMKPTLRTYELL FSLFGNVNVPYEQGDVLSHVDVSKRISIIEMDMFNNGIQHSFVSMKNLNTIFRIIKTPFF ESVGCPTFIVYSKPYKDLTLRGCPALPNSFPRLKGFRSNIRAFGAEGMIEEMLRYLNIAE NTLWNINPHQKSDLYSTALHALVDVKETHRAVKMFKIMRSCSLPTNISIYNTMIECCKWL PCFKSASALLSLMLRDGFNPTVVTFTSLLKVVLENDNFEGALDLLDICKIEGLQPGIQTF NTVLLRAYARGQIHVLEYILECIHRSKIQPDPSTLWYTFCAYEEHELYNTAIESLLVLSM RMISEDAGIPSEKRIVFEDLILSEEPDAEFRIIRAFQAGEEFLATALLNLRWCATMGATV SWSPEESLWAMRLAASYDANKRPHINPSDAPKSWGRNPLNRPYWEANG

Transcript Sequence

Transcript ID	Zm00001d020821_T022
Transcript Infomation	cdna chromosome:B73_RefGen_v4:7:133912304:133927085:-1 gene:Zm00001d020821 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat-containing protein
Sequence	GCACAAAGCTGTGACTATCTGAGGGTGTCTTCTAAAAGAAGATACCGATCATCGAGACTA GACATTCCTGTACCTGCTTTGAATGAATTTGAAGATCTCAACCTGCCATCATGCCAAGGG AAGCTGGCTACCGGCGAACATTTGGTTGATGCTCAACCTGAGCTATTTGATGAGAAAACT CGGCCAGGCAACAATCTTTCTTATAAGGTTGTAGTAGATGCGAGTGTTGCAAATACATTG AAGTCTGCACCAAGCACAGTAAAACAAATTTTGAGATGGGCGTTCAATGATGTTTTGCAT GCATGTGTACCGTTCAACAACTGCCAGTTAGCTGAGCATTTATTTACAGAGATGCAGAAA CTTGGATTGCAACCAACAAGTTATACATATGACGGTTTTATTAAAACCGTGATAGCTGGG AAAGGAATTGCATATGCCAACAAAGTGATTAACGCCATGGAGAGAAGGGGCATTGAACCT TACAGTGATACACTTGCTGCTCTCTCAGAGGGTCATAGCAATAGTTTACAGTTGGATTTG GCTGAGGAGTTTTTGGAAAGAATTTCAGAGATAAAACCAAAGCATATAGGTTCCTTTAAT GCTTTGCTTTCTGGATGTGCGATTATGAATGAACCAGAAAGAGCTGTCCGCATACTAGCT AAAATGAAACATGTGAACATGAAGCCAACTCTCAGGACATATGAACTTTTGTTTTCTCTG TTTGGAAATGTAAATGTTCCTTATGAACAAGGAGATGTGCTCTCTCATGTCGATGTTTCC AAAAGGATAAGTATCATTGAGATGGACATGTTTAACAATGGAATCCAACACAGCTTTGTG TCCATGAAGAACTTGAACACAATTTTCAGGATAATCAAGACCCCTTTTTTTGAGTCTGTG GGCTGTCCAACATTTATTGTTTATAGCAAGCCATACAAAGACCTTACACTTAGGGGCTGC CCAGCTCTTCCAAATTCTTTTCCAAGGCTCAAAGGATTCCGCTCCAATATACGAGCTTTT GGAGCTGAGGGGATGATAGAGGAAATGCTGAGGTACCTGAATATAGCAGAAAATACTCTG TGGAACATAAATCCTCATCAGAAGAGTGATCTCTACAGCACTGCGTTGCATGCTCTGGTT GATGTGAAGGAAACTCACAGAGCAGTAAAGATGTTCAAAATCATGAGATCATGCAGTCTT CCAACTAATATTTCAATTTATAATACCATGATAGAGTGCTGCAAATGGCTGCCATGCTTC AAATCAGCTAGTGCTTTGCTGTCTTTGATGCTTCGAGATGGTTTCAATCCTACGGTTGTG ACTTTTACATCACTCCTGAAGGTTGTATTAGAAAATGATAATTTTGAAGGGGCTCTGGAT CTGCTTGATATATGCAAGATTGAAGGACTTCAGCCTGGCATACAGACTTTCAACACAGTA CTCTTACGTGCATATGCTAGAGGTCAAATTCATGTCCTTGAATATATTTTGGAGTGTATA CATCGATCAAAAATCCAACCTGATCCATCAACACTTTGGTACACGTTTTGTGCCTACGAG GAGCATGAACTGTACAATACTGCAATTGAGTCATTGCTAGTCCTCAGCATGAGAATGATA TCTGAGGATGCCGGCATTCCTAGTGAGAAAAGAATTGTTTTTGAAGATCTAATCCTCAGT GAAGAACCTGATGCTGAATTCAGGATCATAAGGGCATTCCAAGCAGGCGAAGAATTCCTT GCGACAGCTTTACTGAACCTAAGATGGTGTGCCACAATGGGTGCCACCGTATCTTGGTCA CCGGAGGAGAGTCTTTGGGCAATGAGGCTGGCAGCCTCGTATGATGCTAACAAGAGACCA CATATAAACCCCTCGGATGCTCCCAAATCTTGGGGAAGGAATCCACTTAACCGCCCGTAT TGGGAGGCTAACGGGTGATTGGTTGATTGGTTGGCTACGCTTCCGTTGATCACGCTTGGC ACGTGTTTGGATGGCTGCAGAGCATCTCTACCGCCTGCTCCCATGCATGCAGCGTTGATT TTTTCCCCCACTGGGTAGCCTGCATGCGCGGAAACTCAACTCCCCGTCTCCCCCTCGTTT CCAGCGGCCCAGGCTGGCACGATGCTGGTGCGAGACGCCCCTACAACCAATCATGCGTTA ACTGAGGCAGAGCTGGAGTCTAGCGTTTCAAATCTCTCTGTTGAGTATGATGACAATGTT GTGTTCTGTTTTGCTGGAAGCCAGTAGATGTTTTGTTTACCTAACTAACATGATTGCAGT