Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d020775_T002
CDS Infomation	cds chromosome:B73_RefGen_v4:7:132100220:132104288:-1 gene:Zm00001d020775 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:asg49 description:Pentatricopeptide repeat-containing protein
Sequence	ATGGGAGAGAACGGAGTTCAGCTGACACTGACCTCCACTTTGAAGAGCACAGGCAAGCCA CGGATCAATGCGGACGGGCTGAATAATGGATCACATACTACCAAAGAGAAGCATGAACAC GGTGGCACTTTCCAACCATCAAAAGGCCAGAAGCAGCAGCTGTGCACAACATGTGCAAAA GGGCATACTTGTCAATCGGTCATCAACCGGACAAGACAAATGCGAGCTCTAATCGACTCA AAGAAGCCTTACCAAGCACACTCTGTATTCAAGCACTTAATGGATGAGGGGCACAAGCCT TCATTGGTCACATACACAATTCTACTGACCGCCCTGACGAACCAGAGGATGTTTGAGTCG ATTCCATCACTGCTTGCTGAAGTTGAACTAGCTGGAGTTAGGCCAGACTCCATCTTCTTC AATGCCTTGATAAATGCGTTTGTTGAGGCGAAGCGGATGGGCGAAGCGATAAACACATTC TGGAAAATGAAACATTCTGGCTGCCACCCAACTACAAGCACCTTCAACACACTGATAAAA GGTTATGGCATTGTAGGCAAACCCGAAGAATCACAGCGCGTCTTCGACATGATGGGCGTT GAAGGATCAGTCAGGCCTAACCTCACAACATACAACATTCTTGTGAAGGCATGGTGTGAT CACAGAAATCTTGAGGAGGCCTGGGGTGTTGTGGGCAAAATGCAAGCAGGTGGTTTTGAG CCTGATATTGTAACTTACAATACCATAGCCAGTGCATATGCCAATAATGACGAGACATGG AGAGCAGAAGAGCTCATTGTGGAGATTCAGACTAGAGTGCGCACCAGTGAGCGAACATGG GGCATAATCATTGGTGGTTATTGCCGGGAGGGCAGGTTGGAGGAAGCATTACGATGCGTC CAGCAAATGAAGGATGCAGGAAGTGTTCCTAACGTCGTCATCTTCAACACACTGCTGAAG GGCTTTCTTGATGCAAATGACATGGCTGCTGTCAATAAGATCCTGGGTCTGATGGAGAAA TTTGGCATCAAACCTGACATCGTTACCTACAGTCACCAGTTGAACACATTCAGCTCGCTG GGCCACATGGCTAAATGCATGCATGTATTTGACAAAATGATCGAAGCAGGAATTGAGCCA GATCCTCAGGTATACAGCATTCTCGCCAAAGGATTTGTTCGTGCTCAGCAGCCTGAGAAA GCAGAAGACCTTCTGTTGCAAATGAGCCATCTTGGTCTCTGCCCAAATGTCGTCACTTTC ACCACTGTCATTAGCGGGTGGTGCAGCGTGGCCGACATGGAGAGTGCCATGAGAGTCTAT GACAAGATGTGCAAGTCAGGCGTCTATCCCAATCTCAGGACATTTGAGACTCTGATCTGG GGCTACAGCGAACAGAAGCAGCCATGGAAAGCTGAGGAAGTCCTTCAGATGATGCGGGAG ACTGGTGTCAAGCCGAAGCAAAGCACCTACTGTCTCATTGCTGATGCATGGAAGGCTGTT GGTTTGACTGAGAACATCAACAACTCAAATGGTTCCCCCAATGGTCCTTATGCAATCGAG AAATTGGATCATTCAAATGACAATTGCAACGTGCGAATATCAGAAGACAATAATAACAAG CTGCAGTTTTTTGATGAAAGTAATGGGCGTGCAATGAATGGCCGTTCACGTTCCAGTTTT CTTCAGATAACAAATGCACTAGGCAGCAGTGGTATAGTTTCTGCCAAGGTCATGAAGGCT GGAGAATTTCCATCTGAAAGACTGAAGGCTATCAAAAACACATCCTTTCCACAAGGATTT CAATTGTTGCATCTCGAGTTTTGTAGGAAGCAGCTTCGGAAGAATGGTGGATTCTGTAGT CAGAGCATCAACTCATTCAAAATGGGTTTCTCTAGCAGAGGATGCATTTATTAA

Peptide Sequence

PEP ID	Zm00001d020775_P002
PEP Infomation	pep chromosome:B73_RefGen_v4:7:132100220:132104288:-1 gene:Zm00001d020775 transcript:Zm00001d020775_T002 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:asg49 description:Pentatricopeptide repeat-containing protein
Sequence	MGENGVQLTLTSTLKSTGKPRINADGLNNGSHTTKEKHEHGGTFQPSKGQKQQLCTTCAK GHTCQSVINRTRQMRALIDSKKPYQAHSVFKHLMDEGHKPSLVTYTILLTALTNQRMFES IPSLLAEVELAGVRPDSIFFNALINAFVEAKRMGEAINTFWKMKHSGCHPTTSTFNTLIK GYGIVGKPEESQRVFDMMGVEGSVRPNLTTYNILVKAWCDHRNLEEAWGVVGKMQAGGFE PDIVTYNTIASAYANNDETWRAEELIVEIQTRVRTSERTWGIIIGGYCREGRLEEALRCV QQMKDAGSVPNVVIFNTLLKGFLDANDMAAVNKILGLMEKFGIKPDIVTYSHQLNTFSSL GHMAKCMHVFDKMIEAGIEPDPQVYSILAKGFVRAQQPEKAEDLLLQMSHLGLCPNVVTF TTVISGWCSVADMESAMRVYDKMCKSGVYPNLRTFETLIWGYSEQKQPWKAEEVLQMMRE TGVKPKQSTYCLIADAWKAVGLTENINNSNGSPNGPYAIEKLDHSNDNCNVRISEDNNNK LQFFDESNGRAMNGRSRSSFLQITNALGSSGIVSAKVMKAGEFPSERLKAIKNTSFPQGF QLLHLEFCRKQLRKNGGFCSQSINSFKMGFSSRGCIY

Transcript Sequence

Transcript ID	Zm00001d020775_T002
Transcript Infomation	cdna chromosome:B73_RefGen_v4:7:132100220:132104288:-1 gene:Zm00001d020775 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:asg49 description:Pentatricopeptide repeat-containing protein
Sequence	GCTCATCCTTTGCCTTATCTTTTCGCATAGTCGCATTCACCCAGCGTGCGCTCTCTTTTG CTCTCTCTATCTCTCTCGTGGCAACGACTGCGCGAGCGCCGGCGCCTACGCCAGGTGCCC AGGCCTCCGTCGGTCATTTCGCCAGGCATTCGTCGCGGGCTCTTCGCCGGCGACGAGCAC ACCCACCAAGTTGAGGATTGGTCCTTTACGAGCATGTTATAATGGGAGAGAACGGAGTTC AGCTGACACTGACCTCCACTTTGAAGAGCACAGGCAAGCCACGGATCAATGCGGACGGGC TGAATAATGGATCACATACTACCAAAGAGAAGCATGAACACGGTGGCACTTTCCAACCAT CAAAAGGCCAGAAGCAGCAGCTGTGCACAACATGTGCAAAAGGGCATACTTGTCAATCGG TCATCAACCGGACAAGACAAATGCGAGCTCTAATCGACTCAAAGAAGCCTTACCAAGCAC ACTCTGTATTCAAGCACTTAATGGATGAGGGGCACAAGCCTTCATTGGTCACATACACAA TTCTACTGACCGCCCTGACGAACCAGAGGATGTTTGAGTCGATTCCATCACTGCTTGCTG AAGTTGAACTAGCTGGAGTTAGGCCAGACTCCATCTTCTTCAATGCCTTGATAAATGCGT TTGTTGAGGCGAAGCGGATGGGCGAAGCGATAAACACATTCTGGAAAATGAAACATTCTG GCTGCCACCCAACTACAAGCACCTTCAACACACTGATAAAAGGTTATGGCATTGTAGGCA AACCCGAAGAATCACAGCGCGTCTTCGACATGATGGGCGTTGAAGGATCAGTCAGGCCTA ACCTCACAACATACAACATTCTTGTGAAGGCATGGTGTGATCACAGAAATCTTGAGGAGG CCTGGGGTGTTGTGGGCAAAATGCAAGCAGGTGGTTTTGAGCCTGATATTGTAACTTACA ATACCATAGCCAGTGCATATGCCAATAATGACGAGACATGGAGAGCAGAAGAGCTCATTG TGGAGATTCAGACTAGAGTGCGCACCAGTGAGCGAACATGGGGCATAATCATTGGTGGTT ATTGCCGGGAGGGCAGGTTGGAGGAAGCATTACGATGCGTCCAGCAAATGAAGGATGCAG GAAGTGTTCCTAACGTCGTCATCTTCAACACACTGCTGAAGGGCTTTCTTGATGCAAATG ACATGGCTGCTGTCAATAAGATCCTGGGTCTGATGGAGAAATTTGGCATCAAACCTGACA TCGTTACCTACAGTCACCAGTTGAACACATTCAGCTCGCTGGGCCACATGGCTAAATGCA TGCATGTATTTGACAAAATGATCGAAGCAGGAATTGAGCCAGATCCTCAGGTATACAGCA TTCTCGCCAAAGGATTTGTTCGTGCTCAGCAGCCTGAGAAAGCAGAAGACCTTCTGTTGC AAATGAGCCATCTTGGTCTCTGCCCAAATGTCGTCACTTTCACCACTGTCATTAGCGGGT GGTGCAGCGTGGCCGACATGGAGAGTGCCATGAGAGTCTATGACAAGATGTGCAAGTCAG GCGTCTATCCCAATCTCAGGACATTTGAGACTCTGATCTGGGGCTACAGCGAACAGAAGC AGCCATGGAAAGCTGAGGAAGTCCTTCAGATGATGCGGGAGACTGGTGTCAAGCCGAAGC AAAGCACCTACTGTCTCATTGCTGATGCATGGAAGGCTGTTGGTTTGACTGAGAACATCA ACAACTCAAATGGTTCCCCCAATGGTCCTTATGCAATCGAGAAATTGGATCATTCAAATG ACAATTGCAACGTGCGAATATCAGAAGACAATAATAACAAGCTGCAGTTTTTTGATGAAA GTAATGGGCGTGCAATGAATGGCCGTTCACGTTCCAGTTTTCTTCAGATAACAAATGCAC TAGGCAGCAGTGGTATAGTTTCTGCCAAGGTCATGAAGGCTGGAGAATTTCCATCTGAAA GACTGAAGGCTATCAAAAACACATCCTTTCCACAAGGATTTCAATTGTTGCATCTCGAGT TTTGTAGGAAGCAGCTTCGGAAGAATGGTGGATTCTGTAGTCAGAGCATCAACTCATTCA AAATGGGTTTCTCTAGCAGAGGATGCATTTATTAATTCGATGTACACATTGGGCTGAAAC TTAAACAAAAACAAATCTCGGTGTTCCAAGTCTCCGCCTATGATGCGGGCCATTTTTATG ATTCAGACGCAGTTCCTGCAGTGTCAAGCATTTCAAACGT