Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d020683_T002
CDS Infomation

cds chromosome:B73_RefGen_v4:7:128194916:128196490:1 gene:Zm00001d020683 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein SHOOT GRAVITROPISM 5
Sequence

ATGATAATGGAGTGTTTGCTTATTGGTGGCAGGCGAGGAGCGCTGGTGGAGAGCTTCATA
GAGCACCAGGACACTTGCAACGCCGGGCGGGCACGGGCGAGCACCGGTGTGGCTGCTGCT
AGTGCTGGGTCGCAGCCGCAGGCGCCGCCGCCCATGTCACTGTCGAGGACCGCGTCGAGC
ACCAGCCCGTCCAGCGACATTGTCATCAGCCCGGTGGCCGCCTGGCCCGGTTCGTCGGCA
CCGACGATTCCAAGCCCTGCGACCGCCGCGTTCCACCGGTTCGAACAAGTCCCGTCGCCG
CGGACACCGCCATCGGACCACCATCACCGCGGCGGGCACAACCTCGAGCTGCAGCTCATG
CCGCCGTCCGGCAGCGGCGTGTACGGCGTCGCGCCACGCACTCCGGCCGCTCCTCCACAG
AGCCACCCCGCCACCATGCAGCTGCAGCTGTCCATCGGCGTCTGCGGCGGCGGGGGGTTC
GGGGACGAGGCGATGCTGGCAGCGGCGAGGGAGAAAGAGGAGGTGGAGGCGCGGGAGCAG
CTGCGGCAAGCTGTGGCGGAGAAGGCGGCGGCGAACGAGGCCCGCGCGCAGGCGAGGCGG
CACGCGGAGCTGGCCGAGCAGGAGCTGGCGAGCGCCAAGCGGATGCGGCGGCAGGCGCAG
GTGGAGCTGAGCCGAGCCCACGCGCTCCGGGATCACCTGCCTCGGCTGCCGCCACAAGTT
CCGCGCGCGTCCGCAGCTCCTGGATGCGGCCCTGGGCGCCCCCGAGGTGACCTGCAGCTA
CATGTCCTCCGTCGTGACAGAAGGCGGCGACGCCGAGGCCGACGATGA

Peptide Sequence

PEP ID

Zm00001d020683_P002
PEP Infomation

pep chromosome:B73_RefGen_v4:7:128194916:128196490:1 gene:Zm00001d020683 transcript:Zm00001d020683_T002 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein SHOOT GRAVITROPISM 5
Sequence

MIMECLLIGGRRGALVESFIEHQDTCNAGRARASTGVAAASAGSQPQAPPPMSLSRTASS
TSPSSDIVISPVAAWPGSSAPTIPSPATAAFHRFEQVPSPRTPPSDHHHRGGHNLELQLM
PPSGSGVYGVAPRTPAAPPQSHPATMQLQLSIGVCGGGGFGDEAMLAAAREKEEVEAREQ
LRQAVAEKAAANEARAQARRHAELAEQELASAKRMRRQAQVELSRAHALRDHLPRLPPQV
PRASAAPGCGPGRPRGDLQLHVLRRDRRRRRRGRR

Transcript Sequence

Transcript ID

Zm00001d020683_T002
Transcript Infomation

cdna chromosome:B73_RefGen_v4:7:128194916:128196490:1 gene:Zm00001d020683 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein SHOOT GRAVITROPISM 5
Sequence

GTTCTTGAGTTCACGCGGCCATGCACGCATCCTTGCCTCCTTGGTCTTTGCACTCATGTA
TGTGTGTACTAGCAGTAGCCAAAATGTTCCCCGTTTTTTTTTTTTTTTTGTTTCCGGATG
ATAATGGAGTGTTTGCTTATTGGTGGCAGGCGAGGAGCGCTGGTGGAGAGCTTCATAGAG
CACCAGGACACTTGCAACGCCGGGCGGGCACGGGCGAGCACCGGTGTGGCTGCTGCTAGT
GCTGGGTCGCAGCCGCAGGCGCCGCCGCCCATGTCACTGTCGAGGACCGCGTCGAGCACC
AGCCCGTCCAGCGACATTGTCATCAGCCCGGTGGCCGCCTGGCCCGGTTCGTCGGCACCG
ACGATTCCAAGCCCTGCGACCGCCGCGTTCCACCGGTTCGAACAAGTCCCGTCGCCGCGG
ACACCGCCATCGGACCACCATCACCGCGGCGGGCACAACCTCGAGCTGCAGCTCATGCCG
CCGTCCGGCAGCGGCGTGTACGGCGTCGCGCCACGCACTCCGGCCGCTCCTCCACAGAGC
CACCCCGCCACCATGCAGCTGCAGCTGTCCATCGGCGTCTGCGGCGGCGGGGGGTTCGGG
GACGAGGCGATGCTGGCAGCGGCGAGGGAGAAAGAGGAGGTGGAGGCGCGGGAGCAGCTG
CGGCAAGCTGTGGCGGAGAAGGCGGCGGCGAACGAGGCCCGCGCGCAGGCGAGGCGGCAC
GCGGAGCTGGCCGAGCAGGAGCTGGCGAGCGCCAAGCGGATGCGGCGGCAGGCGCAGGTG
GAGCTGAGCCGAGCCCACGCGCTCCGGGATCACCTGCCTCGGCTGCCGCCACAAGTTCCG
CGCGCGTCCGCAGCTCCTGGATGCGGCCCTGGGCGCCCCCGAGGTGACCTGCAGCTACAT
GTCCTCCGTCGTGACAGAAGGCGGCGACGCCGAGGCCGACGATGAGCCGCCCCTCGACGG
CAGGGACGGCATGCTGCAGCGGCGCCGACACGCCATGGCAATGGACGTCATCCTCTAGCT
AACCTGAAGCAAGACGCCGGGGTTGCATTTGCATTGGCCCCTGCTGTATGAGGTGTATCA
GATGCCGATGCCTGATGGTGCGTAGACAGTGGAAGACCCCGCTAGCTCGATCGGGCCAGT
GCTGCCTAGACTTCGAGTCCTGTGATGAGAAGGAAGGACCGGAGAGGTAGCCATTAGGCA
AGTCCAAGGAGAGACGAAGACGAGGGCTAGCTGCTACTAGCTTACTGTGACGTACGTGCA
TGGAATCTTTCGGTGTTTGCTTCCTATTGGATCTTGTTGGAAAGAAACATTCATTATATT
GCTCATGGAAAGCAAGTTGATGATGCCCTTTGTAAAGGTCTT