Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d020651_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:7:126619286:126620212:-1 gene:Zm00001d020651 gene_biotype:protein_coding transcript_biotype:protein_coding description:Plant viral-response family protein

Sequence

ATGGGTGGCGGCACTCCGCGCAGCAGCATCGGCCACATCCTCCCCGGCGCCGGTTTCCTG
GCCGTCGGCCTGTGGCACCTGTTCAACCACATCAGGCTCTTCTCCCTGCGCCCCGACGCG
TACGTCGCGCCCGTCTGGTTCCCGGCGCCGCGCGTCCGCCACCTCGAGCTCATCCTCGTC
ATCGCCGGCAGCGCCGTCGAGTTCTCCATGGAGATGTTCGTCGACCACTCCACCTTCCTG
CCGTTCGACGCCGACGGATCCATCCCGTCCGACCGCCTGCACAACCACGAGCACGCCATC
ATCTGCCTCGCGCTGCTCGTGTACGCGGCCTCCGCGCTGCACCTCGACCGCGCCCGCGCG
CGCTGCCGCGACGCGCTCTCCCTGCTCCTCGTCGCGGCCGTCTTCGCGCAGGAGCTGCTC
GTCTTCCACTTCCACTCCACCGACCACGCCGGCCTCGAGGGCCAGTTCCACTGGCTCCTG
CAGCTCGTCGTCGCCGCGTGCCTCGCCACGGCGCTCCTGGGCATCGGCTTCCCGCGGAGC
TTCGCCGTCAGCCTGGTCCGCTCGGCGTGCGTCACGTTCCACGGGGTGTGGTTCATGGTC
ATCGGCGCCATGGTGTGGGTCCCGAGCCGTGTGCCCAAGGGCTGCTCGCTCGTGGAGGAG
GACGGCCGCAACACCGTGCGCTGCCATAGCGAGGCCAGCCTGCACCGCGCCAAGGCGCTC
GCCAACCTACAATTCGGGTGGTACCTGTCCTCCATGACGGTTTTTGTCGTCGTGCTATAC
GTGAACGTGTGCAAGTGGTATCCTGCGGAGACAGCGTACGTGCGGCTACCGCCGGAAGCC
GGCGAAGAGGAAGAACACCTGAAGCGCAAGTGCGGGATCGTGTGCAGCGGCGACCATGGA
TTCACGCCCTTGGAGATTGAGGTGTAA

Peptide Sequence

PEP ID

Zm00001d020651_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:7:126619286:126620212:-1 gene:Zm00001d020651 transcript:Zm00001d020651_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Plant viral-response family protein

Sequence

MGGGTPRSSIGHILPGAGFLAVGLWHLFNHIRLFSLRPDAYVAPVWFPAPRVRHLELILV
IAGSAVEFSMEMFVDHSTFLPFDADGSIPSDRLHNHEHAIICLALLVYAASALHLDRARA
RCRDALSLLLVAAVFAQELLVFHFHSTDHAGLEGQFHWLLQLVVAACLATALLGIGFPRS
FAVSLVRSACVTFHGVWFMVIGAMVWVPSRVPKGCSLVEEDGRNTVRCHSEASLHRAKAL
ANLQFGWYLSSMTVFVVVLYVNVCKWYPAETAYVRLPPEAGEEEEHLKRKCGIVCSGDHG
FTPLEIEV

Transcript Sequence

Transcript ID

Zm00001d020651_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:7:126619286:126620212:-1 gene:Zm00001d020651 gene_biotype:protein_coding transcript_biotype:protein_coding description:Plant viral-response family protein

Sequence

ATGGGTGGCGGCACTCCGCGCAGCAGCATCGGCCACATCCTCCCCGGCGCCGGTTTCCTG
GCCGTCGGCCTGTGGCACCTGTTCAACCACATCAGGCTCTTCTCCCTGCGCCCCGACGCG
TACGTCGCGCCCGTCTGGTTCCCGGCGCCGCGCGTCCGCCACCTCGAGCTCATCCTCGTC
ATCGCCGGCAGCGCCGTCGAGTTCTCCATGGAGATGTTCGTCGACCACTCCACCTTCCTG
CCGTTCGACGCCGACGGATCCATCCCGTCCGACCGCCTGCACAACCACGAGCACGCCATC
ATCTGCCTCGCGCTGCTCGTGTACGCGGCCTCCGCGCTGCACCTCGACCGCGCCCGCGCG
CGCTGCCGCGACGCGCTCTCCCTGCTCCTCGTCGCGGCCGTCTTCGCGCAGGAGCTGCTC
GTCTTCCACTTCCACTCCACCGACCACGCCGGCCTCGAGGGCCAGTTCCACTGGCTCCTG
CAGCTCGTCGTCGCCGCGTGCCTCGCCACGGCGCTCCTGGGCATCGGCTTCCCGCGGAGC
TTCGCCGTCAGCCTGGTCCGCTCGGCGTGCGTCACGTTCCACGGGGTGTGGTTCATGGTC
ATCGGCGCCATGGTGTGGGTCCCGAGCCGTGTGCCCAAGGGCTGCTCGCTCGTGGAGGAG
GACGGCCGCAACACCGTGCGCTGCCATAGCGAGGCCAGCCTGCACCGCGCCAAGGCGCTC
GCCAACCTACAATTCGGGTGGTACCTGTCCTCCATGACGGTTTTTGTCGTCGTGCTATAC
GTGAACGTGTGCAAGTGGTATCCTGCGGAGACAGCGTACGTGCGGCTACCGCCGGAAGCC
GGCGAAGAGGAAGAACACCTGAAGCGCAAGTGCGGGATCGTGTGCAGCGGCGACCATGGA
TTCACGCCCTTGGAGATTGAGGTGTAA