Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d020636_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:7:125837492:125842596:1 gene:Zm00001d020636 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:cysteine protease2 description:Cysteine proteinase 2

Sequence

ATGGCCCCACGCCGCCTGCTCGTCCTCGCCGTCGTCGCCCTCGCGGCCACCGCCGCCGCG
GCCAACTCCGGCTTCGCGGACTCGAACCCGATCCGCCCCGTCACCGACCGCGCGGCCTCC
GCGCTCGAGTCCACGGTCTTCGCCGCGCTCGGCCGCACCCGCGACGCGCTCCGCTTCGCA
CGCTTCGCTGTGAGGTACGGCAAGAGCTACGAGAGCGCGGCGGAGGTCCACAAGCGGTTC
AGGATCTTCTCCGAGAGTCTCCAGCTCGTCCGCTCCACCAATCGGAAAGGCCTCTCCTAC
CGCCTCGGCATCAACCGCTTCGCGGACATGAGCTGGGAGGAGTTCCGTGCGACCCGGCTC
GGCGCAGCCCAGAACTGCTCCGCCACGCTTACCGGCAACCACCGGATGCGCGCCGCCGCC
GTTGCGCTGCCGGAGACGAAAGACTGGAGGGAGGATGGGATTGTGAGCCCAGTGAAAAAC
CAGGGCCACTGTGGATCATGCTGGACCTTCAGCACTACTGGTGCACTTGAGGCTGCATAT
ACCCAGGCAACTGGCAAGCCCATCTCTCTCTCTGAGCAACAGCTTATTGACTGTGGTTTT
GCATTCAACAATTTCGGATGCAACGGAGGCCTTCCATCCCAGGCCTTTGAATACATCAAA
TACAATGGTGGCCTTGACACTGAGGAATCTTACCCTTACCAAGGTGTCAATGGAATCTGC
AAGTTTAAGAATGAGAATGTTGGAGTCAAGGTTTTGGACTCGGTTAACATCACCCTGGGT
GCTGAGGATGAACTGAAGGATGCTGTTGGTCTGGTTCGCCCAGTTAGTGTTGCCTTCGAG
GTGATCACTGGTTTCAGGCTGTACAAGAGCGGAGTTTACACTAGCGACCATTGTGGAACT
ACACCGATGGATGTGAACCACGCTGTTCTGGCTGTTGGCTACGGTGTCGAAGATGGTGTA
CCCTACTGGCTCATCAAGAACTCATGGGGCGCTGACTGGGGTGATGAGGGTTACTTCAAG
ATGGAAATGGGCAAGAACATGTGCGGTGTTGCTACGTGTGCATCCTACCCTATTGTCGCA
TGA

Peptide Sequence

PEP ID

Zm00001d020636_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:7:125837492:125842596:1 gene:Zm00001d020636 transcript:Zm00001d020636_T001 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:cysteine protease2 description:Cysteine proteinase 2

Sequence

MAPRRLLVLAVVALAATAAAANSGFADSNPIRPVTDRAASALESTVFAALGRTRDALRFA
RFAVRYGKSYESAAEVHKRFRIFSESLQLVRSTNRKGLSYRLGINRFADMSWEEFRATRL
GAAQNCSATLTGNHRMRAAAVALPETKDWREDGIVSPVKNQGHCGSCWTFSTTGALEAAY
TQATGKPISLSEQQLIDCGFAFNNFGCNGGLPSQAFEYIKYNGGLDTEESYPYQGVNGIC
KFKNENVGVKVLDSVNITLGAEDELKDAVGLVRPVSVAFEVITGFRLYKSGVYTSDHCGT
TPMDVNHAVLAVGYGVEDGVPYWLIKNSWGADWGDEGYFKMEMGKNMCGVATCASYPIVA

Transcript Sequence

Transcript ID

Zm00001d020636_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:7:125837492:125842596:1 gene:Zm00001d020636 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:cysteine protease2 description:Cysteine proteinase 2

Sequence

ACGCTCGTGCCAGCAGGCCATTCTTCTCGCCTTACTCCCTCACAGAACCCAGTAAAATAT
TGCCAGTCCCGCCGTCGAGATGGCCCCACGCCGCCTGCTCGTCCTCGCCGTCGTCGCCCT
CGCGGCCACCGCCGCCGCGGCCAACTCCGGCTTCGCGGACTCGAACCCGATCCGCCCCGT
CACCGACCGCGCGGCCTCCGCGCTCGAGTCCACGGTCTTCGCCGCGCTCGGCCGCACCCG
CGACGCGCTCCGCTTCGCACGCTTCGCTGTGAGGTACGGCAAGAGCTACGAGAGCGCGGC
GGAGGTCCACAAGCGGTTCAGGATCTTCTCCGAGAGTCTCCAGCTCGTCCGCTCCACCAA
TCGGAAAGGCCTCTCCTACCGCCTCGGCATCAACCGCTTCGCGGACATGAGCTGGGAGGA
GTTCCGTGCGACCCGGCTCGGCGCAGCCCAGAACTGCTCCGCCACGCTTACCGGCAACCA
CCGGATGCGCGCCGCCGCCGTTGCGCTGCCGGAGACGAAAGACTGGAGGGAGGATGGGAT
TGTGAGCCCAGTGAAAAACCAGGGCCACTGTGGATCATGCTGGACCTTCAGCACTACTGG
TGCACTTGAGGCTGCATATACCCAGGCAACTGGCAAGCCCATCTCTCTCTCTGAGCAACA
GCTTATTGACTGTGGTTTTGCATTCAACAATTTCGGATGCAACGGAGGCCTTCCATCCCA
GGCCTTTGAATACATCAAATACAATGGTGGCCTTGACACTGAGGAATCTTACCCTTACCA
AGGTGTCAATGGAATCTGCAAGTTTAAGAATGAGAATGTTGGAGTCAAGGTTTTGGACTC
GGTTAACATCACCCTGGGTGCTGAGGATGAACTGAAGGATGCTGTTGGTCTGGTTCGCCC
AGTTAGTGTTGCCTTCGAGGTGATCACTGGTTTCAGGCTGTACAAGAGCGGAGTTTACAC
TAGCGACCATTGTGGAACTACACCGATGGATGTGAACCACGCTGTTCTGGCTGTTGGCTA
CGGTGTCGAAGATGGTGTACCCTACTGGCTCATCAAGAACTCATGGGGCGCTGACTGGGG
TGATGAGGGTTACTTCAAGATGGAAATGGGCAAGAACATGTGCGGTGTTGCTACGTGTGC
ATCCTACCCTATTGTCGCATGAGGCCCTTACGAAGTGTTACATGGTCTGTTTGGCATCAA
TAATGCATGTTTAACCTGAGCTTGGCGATGGGTTATACAGAACGGAAACTCTGTTTGTGA
ATAGAAAATCATGAAGGGAAGGAGTTGACCGGACCCCTGCTTGTACGTCTCCCCGACTGT
GTAGGTAGATTGTCAGTTGGGGTTCCGAAGTACTCTACTCATACGTGTGTATGACAGTTT
ATTTATGAAACAAAATACGCATTGATCGTTATGGTGCAGCCTGGGATTTCTTATTATAAC
ATAATGTATCGTATGTATAAACGGACCGTCCTCAGCACGGACCTAATATAAGCACGACCT
GTTGGCATCACATCAGGGATGGGCCGCATGGCACATCGCACCTAGAGAGATGACAATGGG
AATCCGAATGCCCGACGGTTTTACTTGAT