Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d020615_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:7:125162651:125167090:1 gene:Zm00001d020615 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pectin lyase-like superfamily protein
Sequence	ATGCTGGAGGCCACCGCCGCCGCCTCCTCCCCCCGCGCCGCGGCCGCGGCAGTCGCCGCC GGGGCGGCCGCCGCCGCGGTCGTTTCCTCCCCGCGGCGGGGTGGAGGCTCCGCGCACAAC CACCGGCGGTGGGCCCCGGCCCCGTTCAGGGCTTGCCTGCTCGCGCTCTGGTTGCTGGGC TTCGCGCTCGTCTTCCTGTGGCAGAGCACCTCCGTGGGCCGCGTGCGGCTCTACACGCGC CCGCCGATGCCGAAGCGCGCCGTGGCGTCGTTGGGGCACTGGGCGGCCTCCCCGCCCGTC TACGATCTGAGGGAGTTCGGGGCGGTCGGGGACGGGCGGACGGTTAACACGGCCGCGTTC GAGTCTGCCATCGCGGCGATCGCCGAGAGGGGCGGGGGCAGGCTCACCGTGCCAGCCGGG CGGTGGCTCACCGCGCCGTTCAACCTCACCAGCCACATGACTCTCTTCCTCGCTGCTGGC GCTGAGATCCTAGGGATTCAGGATGAAAGATATTGGCCCTTGATGTCTCCATTACCATCA TACGGCTATGGAAGAGAGCACAAGGGACCTCGATATGGGAGCCTTATACACGGCCAAGAC CTGAAGCATGTGACTATAACAGGTCATAATGGTACTATAAATGGACAAGGTCAAAGTTGG TGGGTAAAATTTCGGAGAAAGCTCCTTAATCACACAAGGGGTCCTCTGGTGCAGCTCATG CGGTCAAGTAACATTATCATTTCTAATATCACTCTTCGTGATTCTCCCTTCTGGACTCTT CACACGTACGACTGCAAGAATGTTACTATCTCAGAAACCACCATCTTGGCTCCAATTGCT GGAGCTCCAAATACTGATGGGATAGATCCAGATTCTTGTGAAAATGTGGTGATAAAAAAC TGCTACATTTCTGTTGGTGATGATGGGATAGCCATAAAGAGTGGTTGGGACCAATATGGA ATTGCTTATGGCCGTCCATCAGCTAATATTACTATCCAGAATGTCGTAATCCGCTCTATG GTCAGTGCTGGAGTATCGATTGGAAGCGAGATGTCTGGTGGTGTCTCGGATGTTTTGGTA GAGAATGTTCATGTCTGGGATTCACGGCGAGGCGTGAGGATAAAGACTGCACCTGGAAGA GGGGCCTATGTAACCAATGTCATTTACCAGAACATAACCTTTGAAAACGTACGTGTCGGT ATAGTGATAAAGACAGACTACAACGAGCACCCAGACGAAGGCTTCGACCCAAAGGCCGTC CCCACCATCGGGAATATCTCTTACACCTCAATCCATGGGCATCGTGTGCGAGTACCGGTC AGGATACAGGGAAGCGCGCAGATCCCTGTGAAGAATGTTACCTTCCATGACATGTCAATC GGTATAGTAGACAAGAAGCACCATGTTTTCCAGTGCTCCTTCGTCCAGGGGCAGGTCATT GGCTACGTTTTCCCTGTGCCTTGCAAGAACCTGGACCTGTACGACGAGCGGCGTGGGCTG GTTAAACAATCAACGTTACAGAATATCTCTGATATCGACTACAGTTTCTGA

Peptide Sequence

PEP ID	Zm00001d020615_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:7:125162651:125167090:1 gene:Zm00001d020615 transcript:Zm00001d020615_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pectin lyase-like superfamily protein
Sequence	MLEATAAASSPRAAAAAVAAGAAAAAVVSSPRRGGGSAHNHRRWAPAPFRACLLALWLLG FALVFLWQSTSVGRVRLYTRPPMPKRAVASLGHWAASPPVYDLREFGAVGDGRTVNTAAF ESAIAAIAERGGGRLTVPAGRWLTAPFNLTSHMTLFLAAGAEILGIQDERYWPLMSPLPS YGYGREHKGPRYGSLIHGQDLKHVTITGHNGTINGQGQSWWVKFRRKLLNHTRGPLVQLM RSSNIIISNITLRDSPFWTLHTYDCKNVTISETTILAPIAGAPNTDGIDPDSCENVVIKN CYISVGDDGIAIKSGWDQYGIAYGRPSANITIQNVVIRSMVSAGVSIGSEMSGGVSDVLV ENVHVWDSRRGVRIKTAPGRGAYVTNVIYQNITFENVRVGIVIKTDYNEHPDEGFDPKAV PTIGNISYTSIHGHRVRVPVRIQGSAQIPVKNVTFHDMSIGIVDKKHHVFQCSFVQGQVI GYVFPVPCKNLDLYDERRGLVKQSTLQNISDIDYSF

Transcript Sequence

Transcript ID	Zm00001d020615_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:7:125162651:125167090:1 gene:Zm00001d020615 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pectin lyase-like superfamily protein
Sequence	GCGGAGCCCACAGACCACAGTCACCGAGCGCCAAGAAGAACGCTCTGCCCGGCCCGCCGT GGCGAGTCCATCCAACGGCCCCGAGAAGCTGAACTGACCGGCCACCGCCCAGGGTCAGCT CGGTCATTCCGCCGCCGCTGTCGTGGTCGTGGTTCCGCGCCAACTCAACTCCACGGCCGC GGCGCTAGCATCCACTCACCATCGTCACTCGCCGCCGCTGGCACCACCCTCCACGCCCCG TCCGCACTTTTTAAAACTACGACCCAGCTGCCGAATCAACCGCCTCCCCCGGCGAGCGCC TCCTTCCTCTCTCCCATGGGCCCCCGCGCCCGAGCCGGGACCGCTTCGCCCACCGGCCGG TGCGCGCGCCATAGATAGATTCCACAAGCTTCGCGACCAGATCCGATGCTGGAGGCCACC GCCGCCGCCTCCTCCCCCCGCGCCGCGGCCGCGGCAGTCGCCGCCGGGGCGGCCGCCGCC GCGGTCGTTTCCTCCCCGCGGCGGGGTGGAGGCTCCGCGCACAACCACCGGCGGTGGGCC CCGGCCCCGTTCAGGGCTTGCCTGCTCGCGCTCTGGTTGCTGGGCTTCGCGCTCGTCTTC CTGTGGCAGAGCACCTCCGTGGGCCGCGTGCGGCTCTACACGCGCCCGCCGATGCCGAAG CGCGCCGTGGCGTCGTTGGGGCACTGGGCGGCCTCCCCGCCCGTCTACGATCTGAGGGAG TTCGGGGCGGTCGGGGACGGGCGGACGGTTAACACGGCCGCGTTCGAGTCTGCCATCGCG GCGATCGCCGAGAGGGGCGGGGGCAGGCTCACCGTGCCAGCCGGGCGGTGGCTCACCGCG CCGTTCAACCTCACCAGCCACATGACTCTCTTCCTCGCTGCTGGCGCTGAGATCCTAGGG ATTCAGGATGAAAGATATTGGCCCTTGATGTCTCCATTACCATCATACGGCTATGGAAGA GAGCACAAGGGACCTCGATATGGGAGCCTTATACACGGCCAAGACCTGAAGCATGTGACT ATAACAGGTCATAATGGTACTATAAATGGACAAGGTCAAAGTTGGTGGGTAAAATTTCGG AGAAAGCTCCTTAATCACACAAGGGGTCCTCTGGTGCAGCTCATGCGGTCAAGTAACATT ATCATTTCTAATATCACTCTTCGTGATTCTCCCTTCTGGACTCTTCACACGTACGACTGC AAGAATGTTACTATCTCAGAAACCACCATCTTGGCTCCAATTGCTGGAGCTCCAAATACT GATGGGATAGATCCAGATTCTTGTGAAAATGTGGTGATAAAAAACTGCTACATTTCTGTT GGTGATGATGGGATAGCCATAAAGAGTGGTTGGGACCAATATGGAATTGCTTATGGCCGT CCATCAGCTAATATTACTATCCAGAATGTCGTAATCCGCTCTATGGTCAGTGCTGGAGTA TCGATTGGAAGCGAGATGTCTGGTGGTGTCTCGGATGTTTTGGTAGAGAATGTTCATGTC TGGGATTCACGGCGAGGCGTGAGGATAAAGACTGCACCTGGAAGAGGGGCCTATGTAACC AATGTCATTTACCAGAACATAACCTTTGAAAACGTACGTGTCGGTATAGTGATAAAGACA GACTACAACGAGCACCCAGACGAAGGCTTCGACCCAAAGGCCGTCCCCACCATCGGGAAT ATCTCTTACACCTCAATCCATGGGCATCGTGTGCGAGTACCGGTCAGGATACAGGGAAGC GCGCAGATCCCTGTGAAGAATGTTACCTTCCATGACATGTCAATCGGTATAGTAGACAAG AAGCACCATGTTTTCCAGTGCTCCTTCGTCCAGGGGCAGGTCATTGGCTACGTTTTCCCT GTGCCTTGCAAGAACCTGGACCTGTACGACGAGCGGCGTGGGCTGGTTAAACAATCAACG TTACAGAATATCTCTGATATCGACTACAGTTTCTGACAATGGCATTTGATACCACTGTAC TATTGCTGTAGGTGTATTCAGTATTCACAGCCGTCACAGTCCTTTCCACACATTTAGAAG CAAAATTTTGGGTAGCTTTTACACTCTTCACCTCACAGTCAGGCATGTATCTAAGGAAGA TCGACTTGACCATACTGTCTCGTAGAGGGACGCCAGGAATGTTGCCTTTTCACTTTTTTG ATCACTGTATGATTACACTTACTTGGTTACACAGTCGACAGTACACTTTTGATAGTGCTT ACTGTTCATGGCAGACTACATTTACCTTGCCCTTTTTAAAACAGATGTGGATGTATATGT ATTTGGTAGTTTGAACCTGGAATGGTTGGTTCTTCTTCCAAGTTGTCTTCATATGAAGCT GGGTTTGTCGAGACAACTTCAAAAGAAGTGGGTATTCATGATGTGAAGTGATTTAGCAGA AACAAACAGAGATATTTTAATTTGGCCAAGACAGTCTTTTACACGCGCAAAGTTTCCACG CATTCGTGCGATGGCAGGAGATGGGTGCG