Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d020609_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:7:124925904:124930053:1 gene:Zm00001d020609 gene_biotype:protein_coding transcript_biotype:protein_coding description:Riboflavin synthase-like superfamily protein
Sequence	ATGTGGACGCCGTCGCGCGGGAGCAACGCCCGGCGCAGCGGCCACCGCCGCATCGCGGAC TACCTGGCGGACGACCAGACCACCACCACAGCCACCGACGCCTCCGACAACGAGTCCTAC ACTACCGCCTATGGGGAGGAGTTCTTCGCCGCCGCCGCCGCCGGGAGCGGCGGCGCCGGC GGCATGCTGCCGGCATTCCTGGCGGACCAGGGGGACCTGGTGGAGGTCATGCTGGAGCTG GACGAGGAGTCCATGGTGGTGCGCAGCGTCACGCCCACCAGCGCGGCGCTCTACGGCGCC GCCTCCCTCCCGGCGCCGCCGTCCGCGGGGGTCCTCGGGGTGTCGCCGTCGCCGCGCCGC GCGCCTTCGGAGGGCGGCGGCCGCCTGAGCCGGTGCTCGTCGACGTCGTCGCGGATACGG AAGAAGTTCGCGTGGCTCCGGTCGCCGTCGCCCTCCCCGTCCCCGTACCGCCCCACGCCC GCCGAGCTTCAGCGGGAGGCCGCCATGGCGGCGCGCGAGCGGCGGCGGGAGCAGGCGCAG CTCAACCGGTCCCGCGCCGGCGCCAGGCGCGCGCTCAAGGGCCTCCGCTTCATCAGCCGC ACCACGGGCTCCGTCGAGGCCGCCGAGCTCTGGCGCCGCGTCGAGGAGCGCTTCAACGAC CTCGCCCGCGAAGGGCTGCTCTCCCGCGACGACTTCGGCGAATGCATCGTTCACATTGTT ATCCTCCGCACACGCGAGGAAACAGCTCGATCCTACTGTAATTGCGACGTCCTTATCCGC GATCTTATGGCGCTCCACGCCCAAACTGCAGGAATGGTGGACTCCAAGGAGTTCGCGGTG GGCATCTTCGACGCGCTGGCGCGGCGGCGGCGGCAGAACCTGGAGCGGATCACCAAGGAG GAGCTCTACGACTTCTGGCTCCAGATCTCCGATCAGAGCTTCGACGCGCGGCTCCAGATC TTCTTCGACATGGTGGACACCAACGTGGACGGGAGGATAACGAGGGAGGAAGTACAGGAG CTGATCGTGCTCAGCGCGTCGGCCAACAAGCTGGCAAAGCTCAAGGAGCAGGCGGAGGAG TACGCGTCGCTCATCATGGAGGAGCTCGACCCGGAGAAGCTTGGCTACATTGAGCTGTGG CAGCTCGAAGCGCTGCTGCTCCAGCGCGACACCTACATGAACTACAGCCGCCCGCTGAGC ACGGCCAGCGGGGCCCAGTGGAGCCAGAACCTCGGCGTCGGCGGCGCGCTGACGATAACA GGGGGAGGAGGAGACGGCGGCTGCGGCGTGGACGGCGACCACCCGGGGCCTCCGCGCGAG CGTCGCCGGAGCTGGGGCGTGCGGAAGGCGGCGGCGCGGGTGCGCGTGGCGGCGGAGGAG AACTGGCGCCGCGCCTGGGTGCTGGCGTTGTGGTTCGCGGCCATGGCGGCGCTGTTCGTG TGGAAGTTCGTCCAGTACCGGCGCATGGCGGCGTTCCAGGTGATGGGGTACTGCCTCCCC ACGGCCAAGGGCGCCGCGGAGACGCTCAAGCTCAACATGGCGCTCGTGCTGCTCCCCGTC TGCCGCAACACGCTCACGTGGCTCCGCTCCTCCTGGGCCCGCTTCTTCGTCCCCTTCGAC GACAACATCACCTTCCACAAGATGATCGCGACGGCGATCGTGGTGGGGATCACGCTGCAC GCGGGGAACCACCTGGCGTGCGACTTCCCGCGGGTGATCGCGGCGAGCCCGGAGGAGTAC GCGCTCGTCGCGGGCGCGTTCGGCGCGGACAAGCCGACGTACGCGGGGCTCCTGTCGGGC ACGGAGGGCGTGACGGGCGTGGCCATGGTGGTGCTGATGACCGTCTCCTTCACGCTGGCC ACGCACCCGTTCCGCAAGGGGGAGCCCAAGGGCGCGGGCGCGGCCGCCGGCACGTCGCGG CTCCCGGCGCCACTGAACCGGCTCACCGGCTTCAACGCCTTCTGGTACTCGCACCACCTC CTCGGCATCGTGTACGCGCTCCTGCTCGCGCACGGCTACTTCCTCTTCCTCGTCCGGAGG TGGTACGAGAAGACGTCTGAACAGCTTCGGAGAATTACTGTTGCCATGACGATGCCACTC GAGATTGTAGCAGCGCGCCAGCGTGCGTGA

Peptide Sequence

PEP ID	Zm00001d020609_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:7:124925904:124930053:1 gene:Zm00001d020609 transcript:Zm00001d020609_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Riboflavin synthase-like superfamily protein
Sequence	MWTPSRGSNARRSGHRRIADYLADDQTTTTATDASDNESYTTAYGEEFFAAAAAGSGGAG GMLPAFLADQGDLVEVMLELDEESMVVRSVTPTSAALYGAASLPAPPSAGVLGVSPSPRR APSEGGGRLSRCSSTSSRIRKKFAWLRSPSPSPSPYRPTPAELQREAAMAARERRREQAQ LNRSRAGARRALKGLRFISRTTGSVEAAELWRRVEERFNDLAREGLLSRDDFGECIVHIV ILRTREETARSYCNCDVLIRDLMALHAQTAGMVDSKEFAVGIFDALARRRRQNLERITKE ELYDFWLQISDQSFDARLQIFFDMVDTNVDGRITREEVQELIVLSASANKLAKLKEQAEE YASLIMEELDPEKLGYIELWQLEALLLQRDTYMNYSRPLSTASGAQWSQNLGVGGALTIT GGGGDGGCGVDGDHPGPPRERRRSWGVRKAAARVRVAAEENWRRAWVLALWFAAMAALFV WKFVQYRRMAAFQVMGYCLPTAKGAAETLKLNMALVLLPVCRNTLTWLRSSWARFFVPFD DNITFHKMIATAIVVGITLHAGNHLACDFPRVIAASPEEYALVAGAFGADKPTYAGLLSG TEGVTGVAMVVLMTVSFTLATHPFRKGEPKGAGAAAGTSRLPAPLNRLTGFNAFWYSHHL LGIVYALLLAHGYFLFLVRRWYEKTSEQLRRITVAMTMPLEIVAARQRA

Transcript Sequence

Transcript ID	Zm00001d020609_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:7:124925904:124930053:1 gene:Zm00001d020609 gene_biotype:protein_coding transcript_biotype:protein_coding description:Riboflavin synthase-like superfamily protein
Sequence	GAGACTACGGGTAAGATAATAAAAGGGCCAGGCGTGGCGGGGCGCAACCACCGCTGTGCC TCGGAGAGGAGGACAGCTCTCGCGCCGCGGCTGCCGCCATGTGGACGCCGTCGCGCGGGA GCAACGCCCGGCGCAGCGGCCACCGCCGCATCGCGGACTACCTGGCGGACGACCAGACCA CCACCACAGCCACCGACGCCTCCGACAACGAGTCCTACACTACCGCCTATGGGGAGGAGT TCTTCGCCGCCGCCGCCGCCGGGAGCGGCGGCGCCGGCGGCATGCTGCCGGCATTCCTGG CGGACCAGGGGGACCTGGTGGAGGTCATGCTGGAGCTGGACGAGGAGTCCATGGTGGTGC GCAGCGTCACGCCCACCAGCGCGGCGCTCTACGGCGCCGCCTCCCTCCCGGCGCCGCCGT CCGCGGGGGTCCTCGGGGTGTCGCCGTCGCCGCGCCGCGCGCCTTCGGAGGGCGGCGGCC GCCTGAGCCGGTGCTCGTCGACGTCGTCGCGGATACGGAAGAAGTTCGCGTGGCTCCGGT CGCCGTCGCCCTCCCCGTCCCCGTACCGCCCCACGCCCGCCGAGCTTCAGCGGGAGGCCG CCATGGCGGCGCGCGAGCGGCGGCGGGAGCAGGCGCAGCTCAACCGGTCCCGCGCCGGCG CCAGGCGCGCGCTCAAGGGCCTCCGCTTCATCAGCCGCACCACGGGCTCCGTCGAGGCCG CCGAGCTCTGGCGCCGCGTCGAGGAGCGCTTCAACGACCTCGCCCGCGAAGGGCTGCTCT CCCGCGACGACTTCGGCGAATGCATCGTTCACATTGTTATCCTCCGCACACGCGAGGAAA CAGCTCGATCCTACTGTAATTGCGACGTCCTTATCCGCGATCTTATGGCGCTCCACGCCC AAACTGCAGGAATGGTGGACTCCAAGGAGTTCGCGGTGGGCATCTTCGACGCGCTGGCGC GGCGGCGGCGGCAGAACCTGGAGCGGATCACCAAGGAGGAGCTCTACGACTTCTGGCTCC AGATCTCCGATCAGAGCTTCGACGCGCGGCTCCAGATCTTCTTCGACATGGTGGACACCA ACGTGGACGGGAGGATAACGAGGGAGGAAGTACAGGAGCTGATCGTGCTCAGCGCGTCGG CCAACAAGCTGGCAAAGCTCAAGGAGCAGGCGGAGGAGTACGCGTCGCTCATCATGGAGG AGCTCGACCCGGAGAAGCTTGGCTACATTGAGCTGTGGCAGCTCGAAGCGCTGCTGCTCC AGCGCGACACCTACATGAACTACAGCCGCCCGCTGAGCACGGCCAGCGGGGCCCAGTGGA GCCAGAACCTCGGCGTCGGCGGCGCGCTGACGATAACAGGGGGAGGAGGAGACGGCGGCT GCGGCGTGGACGGCGACCACCCGGGGCCTCCGCGCGAGCGTCGCCGGAGCTGGGGCGTGC GGAAGGCGGCGGCGCGGGTGCGCGTGGCGGCGGAGGAGAACTGGCGCCGCGCCTGGGTGC TGGCGTTGTGGTTCGCGGCCATGGCGGCGCTGTTCGTGTGGAAGTTCGTCCAGTACCGGC GCATGGCGGCGTTCCAGGTGATGGGGTACTGCCTCCCCACGGCCAAGGGCGCCGCGGAGA CGCTCAAGCTCAACATGGCGCTCGTGCTGCTCCCCGTCTGCCGCAACACGCTCACGTGGC TCCGCTCCTCCTGGGCCCGCTTCTTCGTCCCCTTCGACGACAACATCACCTTCCACAAGA TGATCGCGACGGCGATCGTGGTGGGGATCACGCTGCACGCGGGGAACCACCTGGCGTGCG ACTTCCCGCGGGTGATCGCGGCGAGCCCGGAGGAGTACGCGCTCGTCGCGGGCGCGTTCG GCGCGGACAAGCCGACGTACGCGGGGCTCCTGTCGGGCACGGAGGGCGTGACGGGCGTGG CCATGGTGGTGCTGATGACCGTCTCCTTCACGCTGGCCACGCACCCGTTCCGCAAGGGGG AGCCCAAGGGCGCGGGCGCGGCCGCCGGCACGTCGCGGCTCCCGGCGCCACTGAACCGGC TCACCGGCTTCAACGCCTTCTGGTACTCGCACCACCTCCTCGGCATCGTGTACGCGCTCC TGCTCGCGCACGGCTACTTCCTCTTCCTCGTCCGGAGGTGGTACGAGAAGACGTCTGAAC AGCTTCGGAGAATTACTGTTGCCATGACGATGCCACTCGAGATTGTAGCAGCGCGCCAGC GTGCGTGA