Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d020586_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:7:123729032:123731282:-1 gene:Zm00001d020586 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:amidase2 description: amidase2
Sequence

ATGTCGTCGTCGGCGTTCGGCGACTTCGGTCCGCTCACCGAGCGCCGCCGCGCCGAAAAG
GCGCGGCAGCAGCGCAGGCGCATCATGATCGCCGCCGGGACTATCTCCATCATCATCATA
CTCATCGCAATGGGCAGCGCCGCGGTCATGTACAGCGGGAAGAAGTCGTCCAGCGACGGT
GGCCACAAGTCTGCTTCCAAAGGCAAGTCGAGCGGCGGGTCAGACTCGGACTCGGGAGCG
GAAGCGGAAGCGGAATCGGAATCGGAATCGGGGTCGGAATCGAAGACGAATCTGAAGGCC
GTGTCCAAGAGCATCAAGGCGATGTGCTCGCAGACGGACTACACGGACGCGTGTGAGAAG
AGCCTTGGCAAGGCCGCGAACGCCAGCTCGTCGTCGCCCAAGGACATCATCCGCAGTGCT
GTGGAGGTGATCGGCGACGCGATCGGCCAGGCGTTCGACCGCGCCGATCTGATCCTGAGC
AACGACCCACTCGTGAAGGGCGCTGTCGCCGACTGCAAGGAGGTGTTCGCGGACGCCAAG
GATGACCTCAACAGCACGCTCAAGGGCGTCGACGACAAGGACGGCATCGCCAAGCAGAGC
TACCAGCTGCGCATCTGGCTCAGCGCCGTGATCGCGAACATGGAGACGTGCGTCGACGGG
TTCCCCGATGACGAGTTCAAGGCCAAGGTGAAGGAGTCGTTCAACGATGGGAAGGAGCTC
ACTAGCAACGCCCTGGCGCTCATCGAGAAGGGGTCATCGCTCCTCTCTGTGCTAAAGGGC
GGCTCGAAACGACGGTTGCTCGAGGAGGAGGGAGAACCGGCGCAAGCCGGGCCTGCACTC
GACAAGGACGGCATCCCGGAGTGGGTGCCCGACGGTGAGCGGAGGGTGCTCAAAGGCGGC
GGCTTCAAGAGCACACTCACGCCAAATGTGGTGGTGGCGAAGGACGGCAGCGGCAAGTTC
AAGACCATCAACGAGGCGCTCGCCGCCATGCCAAAGACCTACGACGGAAGATACGTGATC
CAAGTGAAGGAGGGAGTGTACGAGGAGTACGTGACCATCACCAAGACTATGAAGAACGTG
ACCTTCTTAGGTGACGGCTCCAAGAAGTCCATCGCCGAGGCCGCGCTCCGGGACTCCGGG
CGCCCGCCCATCCGCAACTACCTGGGCCGGCCGTGGCGCGAGTGCTCGCGCACCATCGTC
ATGGAGTCGGAGCTCCCGGACTTCATCGACAAGGCGGGGTACTTGCCCTGGAACGGCGAC
TTTGGGCTCAAGACGCTGTGGTACGCCGAGTTCGGCAACACAGGGCCCGGCGCCAACACG
GCGGGGCGCGTCAGCTGGCCGGGGTTCAAGAAGGTGATCAGCAAGGCGGACGCCACCAAG
TTCACGGTCGAGAACTTCCTGCACGCCCAGCCATGGATCGATCCCACAGGCACGCCGGTG
AAGTACGACCTGTTCACATGA

Peptide Sequence

PEP ID

Zm00001d020586_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:7:123729032:123731282:-1 gene:Zm00001d020586 transcript:Zm00001d020586_T001 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:amidase2 description: amidase2
Sequence

MSSSAFGDFGPLTERRRAEKARQQRRRIMIAAGTISIIIILIAMGSAAVMYSGKKSSSDG
GHKSASKGKSSGGSDSDSGAEAEAESESESGSESKTNLKAVSKSIKAMCSQTDYTDACEK
SLGKAANASSSSPKDIIRSAVEVIGDAIGQAFDRADLILSNDPLVKGAVADCKEVFADAK
DDLNSTLKGVDDKDGIAKQSYQLRIWLSAVIANMETCVDGFPDDEFKAKVKESFNDGKEL
TSNALALIEKGSSLLSVLKGGSKRRLLEEEGEPAQAGPALDKDGIPEWVPDGERRVLKGG
GFKSTLTPNVVVAKDGSGKFKTINEALAAMPKTYDGRYVIQVKEGVYEEYVTITKTMKNV
TFLGDGSKKSIAEAALRDSGRPPIRNYLGRPWRECSRTIVMESELPDFIDKAGYLPWNGD
FGLKTLWYAEFGNTGPGANTAGRVSWPGFKKVISKADATKFTVENFLHAQPWIDPTGTPV
KYDLFT

Transcript Sequence

Transcript ID

Zm00001d020586_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:7:123729032:123731282:-1 gene:Zm00001d020586 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:amidase2 description: amidase2
Sequence

AGAAATAACGAACTCCCAAACATAGCCTCCACAAACGTCTCCCCACCCTTCTTTCCCCGG
AACAATCCACAGTCCCCAAATAAACCTGTCTCGCCATTGCCTCCCGCCCTTGCTCCATCC
TCTCTGCCTTGGGCGATGGAAGGCAGAGGGTGACGGCCAGGAGGAAGCGGTCAATAAAAG
ACAAAAAAAAATTTGCCCAAAAAAGGACTAGAATAACAGCTCCGATCCGACCATGTCGTC
GTCGGCGTTCGGCGACTTCGGTCCGCTCACCGAGCGCCGCCGCGCCGAAAAGGCGCGGCA
GCAGCGCAGGCGCATCATGATCGCCGCCGGGACTATCTCCATCATCATCATACTCATCGC
AATGGGCAGCGCCGCGGTCATGTACAGCGGGAAGAAGTCGTCCAGCGACGGTGGCCACAA
GTCTGCTTCCAAAGGCAAGTCGAGCGGCGGGTCAGACTCGGACTCGGGAGCGGAAGCGGA
AGCGGAATCGGAATCGGAATCGGGGTCGGAATCGAAGACGAATCTGAAGGCCGTGTCCAA
GAGCATCAAGGCGATGTGCTCGCAGACGGACTACACGGACGCGTGTGAGAAGAGCCTTGG
CAAGGCCGCGAACGCCAGCTCGTCGTCGCCCAAGGACATCATCCGCAGTGCTGTGGAGGT
GATCGGCGACGCGATCGGCCAGGCGTTCGACCGCGCCGATCTGATCCTGAGCAACGACCC
ACTCGTGAAGGGCGCTGTCGCCGACTGCAAGGAGGTGTTCGCGGACGCCAAGGATGACCT
CAACAGCACGCTCAAGGGCGTCGACGACAAGGACGGCATCGCCAAGCAGAGCTACCAGCT
GCGCATCTGGCTCAGCGCCGTGATCGCGAACATGGAGACGTGCGTCGACGGGTTCCCCGA
TGACGAGTTCAAGGCCAAGGTGAAGGAGTCGTTCAACGATGGGAAGGAGCTCACTAGCAA
CGCCCTGGCGCTCATCGAGAAGGGGTCATCGCTCCTCTCTGTGCTAAAGGGCGGCTCGAA
ACGACGGTTGCTCGAGGAGGAGGGAGAACCGGCGCAAGCCGGGCCTGCACTCGACAAGGA
CGGCATCCCGGAGTGGGTGCCCGACGGTGAGCGGAGGGTGCTCAAAGGCGGCGGCTTCAA
GAGCACACTCACGCCAAATGTGGTGGTGGCGAAGGACGGCAGCGGCAAGTTCAAGACCAT
CAACGAGGCGCTCGCCGCCATGCCAAAGACCTACGACGGAAGATACGTGATCCAAGTGAA
GGAGGGAGTGTACGAGGAGTACGTGACCATCACCAAGACTATGAAGAACGTGACCTTCTT
AGGTGACGGCTCCAAGAAGTCCATCGCCGAGGCCGCGCTCCGGGACTCCGGGCGCCCGCC
CATCCGCAACTACCTGGGCCGGCCGTGGCGCGAGTGCTCGCGCACCATCGTCATGGAGTC
GGAGCTCCCGGACTTCATCGACAAGGCGGGGTACTTGCCCTGGAACGGCGACTTTGGGCT
CAAGACGCTGTGGTACGCCGAGTTCGGCAACACAGGGCCCGGCGCCAACACGGCGGGGCG
CGTCAGCTGGCCGGGGTTCAAGAAGGTGATCAGCAAGGCGGACGCCACCAAGTTCACGGT
CGAGAACTTCCTGCACGCCCAGCCATGGATCGATCCCACAGGCACGCCGGTGAAGTACGA
CCTGTTCACATGA