Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d020561_T008
CDS Infomation

cds chromosome:B73_RefGen_v4:7:122327967:122333321:1 gene:Zm00001d020561 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein virR
Sequence

ATGGCGCCGCCGCGAAGCCTCGCCGGCGCCGCCATAGCTGCCACAGCCGCAGCCATCATC
CTCTCATGCTTGTTCTACAGGCGCAAATGCGCTCGTCTGGCCGCGCGGGTCCGCGAGTTG
GAGGCGTCACTGGCGGTCACTGCAGAGAAGGCCGCCGCCGAGCGCCGCGGCAGAGTGCGG
GCCCAGCAGTCACTGAGGGCTCTGAGTCAGCTGGAGCCTGGTTCCGACGAAGCGAGGCCG
ACCAAGGCCGCCGCCTCAGCATCTTACCCGCTGGTGCCGATTGGTACTGTCGAGTCCTGC
TTCTCCACTAGGAACGGTACACCAAGGCAGCCTTTGGTAGTTACATTAGCCAGGGCAACT
TTGGTGCTTGATCCAGCCCGAGTCCCAGCAGCAGCGCTGGAGGGGCTAGCTAGTTACTCA
CATTGCTGGATCCTTTATGTTTTTCATCTGAACACTGATCTTGATAAACTGTGGAAAGAT
CCTGCTAGGTCTAAGCTAAAAGCAAAGGTATGGTTTTGTTCTTAG

Peptide Sequence

PEP ID

Zm00001d020561_P008
PEP Infomation

pep chromosome:B73_RefGen_v4:7:122327967:122333321:1 gene:Zm00001d020561 transcript:Zm00001d020561_T008 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein virR
Sequence

MAPPRSLAGAAIAATAAAIILSCLFYRRKCARLAARVRELEASLAVTAEKAAAERRGRVR
AQQSLRALSQLEPGSDEARPTKAAASASYPLVPIGTVESCFSTRNGTPRQPLVVTLARAT
LVLDPARVPAAALEGLASYSHCWILYVFHLNTDLDKLWKDPARSKLKAKVWFCS

Transcript Sequence

Transcript ID

Zm00001d020561_T008
Transcript Infomation

cdna chromosome:B73_RefGen_v4:7:122327967:122333321:1 gene:Zm00001d020561 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein virR
Sequence

GACGCGCTCCACCATGGCGCCGCCGCGAAGCCTCGCCGGCGCCGCCATAGCTGCCACAGC
CGCAGCCATCATCCTCTCATGCTTGTTCTACAGGCGCAAATGCGCTCGTCTGGCCGCGCG
GGTCCGCGAGTTGGAGGCGTCACTGGCGGTCACTGCAGAGAAGGCCGCCGCCGAGCGCCG
CGGCAGAGTGCGGGCCCAGCAGTCACTGAGGGCTCTGAGTCAGCTGGAGCCTGGTTCCGA
CGAAGCGAGGCCGACCAAGGCCGCCGCCTCAGCATCTTACCCGCTGGTGCCGATTGGTAC
TGTCGAGTCCTGCTTCTCCACTAGGAACGGTACACCAAGGCAGCCTTTGGTAGTTACATT
AGCCAGGGCAACTTTGGTGCTTGATCCAGCCCGAGTCCCAGCAGCAGCGCTGGAGGGGCT
AGCTAGTTACTCACATTGCTGGATCCTTTATGTTTTTCATCTGAACACTGATCTTGATAA
ACTGTGGAAAGATCCTGCTAGGTCTAAGCTAAAAGCAAAGGTATGGTTTTGTTCTTAGCC
CTTCGGTGGTTCCTTTTTCTGATATAAATCGATATTCTTCTGAATGATCTAGTGGATATT
GGGTTTGAATGAACTAATGGAGTCTTCTGCTTTCTCATGGAAGGTAAGGGTACCGAGATT
GAAAGGGGGCAAGATGGGGGTTTTGGCAACTAGATCGCCACATCGGCCCAATCCAATCGG
ACTCAGCGTAGCAAAGGTGTCACCTGAAATGGTTCAATGTTTGTCTTCAATTCTTGTTGC
TTTCTGGAACACATTGAGGAAATCAATATTAGGATTGAGGAATTATGAACTTCTAGTTAC
GTCTGAAGGATGTTTATTTCACAGATTTCACCACATGGATTGTTCCTGTTGTTTTCCTGC
AGCAAAGGTTAGGCAATAGATCAACTCTGACGTCCATCCTACCCACTGTAGCAGTATGGC
AATAGTGCCAAATAGCGGCTGATCTCAGCCCAATCGTAGATGCAGACGGCTGATGTATGG
CCATCTGTAGCAAGTAGTGGCCATAGTGAAGTAGATGTACTACCAGTACTTGTATTTGGT
GAATCTCTCACCAAACCTAGCCAGAGTTGTATATACACTATACAATAGAATTGGCTGAAG
GCAGTCCAGTTCAGCCGCTGCACTTGTGCGTGTTTGTGATCTGTACCTTCTCCCTTTCTT
CTACCTCTAGCCCAAAATGAGTGTGTGTGTTTGAGTGAGGTGCTGCTCACCTATGTAGGC
TTGCCGGATTCCAACAACCAAAACATCCTACTGTGTCACTTCAATTATAAGATAGGCAAC
TAATATATTGATTTAGATAACTCTAGGGTCTGAATCTTTTTATTTGCTTTGGAGTATTGC
CTAGTATGATTGATATTGTTAAGCATGGTAGGGCTATTGTGCATGCTAGATTACTAGAAT
GTGAACATTTCTTATTTGCTTTGAGCTGTTGCCTGCTTTGATTAATCTAAAAACTCAGCC
GGGGAGGGTAAGACCATCTCGTGGTATTATATTAATCTTGCTATAGTGGTTTGACATTTC
CTCCCCTTCATCTCAACATTTTACAGGTGGAGGCGGTGAATGGACATACTCTTTTGCTTT
CTGGAGTAGATTTGGTTGATGGCACGGTACCAATTTGAGCATTTGTATGGTCCAGCATTA
TGCAAAGCATTTGTATAATTAAACTGTCAGCTGTGAACTCTTCCTAATACATTGATCACC
TATCAACAGCCAGTCCTTGATATTAAACCATACCTGCCATATTCTGACAGTGTTAAAGGT
GCAGCTGTTCCCAGTTGGTTAGAGGTATGTACAATATTGCATCTCAGTTCATGCATTTCC
CCAAACTTAAAAATTCACTTCCCTGTCATCTGTTCGAAATAAGTGTGCTTATTTTTTCTG
GATCATTCATCGATCTGCACAGTAATGGATGCTGGGCAACATATGATGCTTGATGGTATC
TGCATAGACATGCTAATTAGTTATTACCACTATACATCTTTATACAAGTGCACTGACCTT
ATCTAACTGAAAAGATGGGGCCTTTATATTTGCTTGATGGTATCTGCATAGACATGCTAA
TTAGTTATTACCTCTATACATATTGTAATATTCATACAAGTGCACTGACCTTATCTAACT
GAAAAGATGGGGCCTTTATATTTTTGCCACTCATGTCACACATTCACATAGCACCCTTCT
AAATTTTCTCAAGAATTTACCATCTGAGAGAGAATAATTCTTACAGTTTGCCAAAACGGG
CATTTCTTGTGTGTGTGGCGTGCCAGCATAGAGACACCTTGTGGAAAGACCAAGCTGCCT
CTGCCTCAGCATCACTAACCAACACGGCTCCTTTCTCTCTCTGTCCGACAGCTCGGTCCT
TCCAGCTCCTTGCTTTGATCTCATCCGACTCGGTCCAACAACCTCTTGGTTGTGGTTCCC
TCACACCACATAATAACTAGGAACGATGCCACCACGTGAACCAACGTTCGCTGTACCTCG
CCCATATACCCGATCTAATATCTACGCTGCTAGTGAGAGGAAGGCTGCCACTGTTGTCAT
TGACTCCGTACATCAGATTCTGACCTCCCAATAGCGATTCCTAATCGTGAACATATACTC
CTTTGTTCTATGTTTTCTAGCGGTTAGGCTATCTCCAGCAGCTTATCCATCCGCATATCC
ATATTCAAACTCTACTCTGCGAAGTACGAACGATATAGTCTACAGTACAAAACAGTGTTT
TGGGTGATCATATGGGTGAACTGCTGGGTCTTAGGGTTAGGCTTACTCTAGTAGGTCCTG
CACCGCGAGTGCGAAAACACGACCGTTTCTGCAGTGGGTCCCACAAGGCAACGCAGATAG
AAGAGCGTGTGTTCCAGCAGATCATGTATCGTGTTGCGTGTGAAGACTGGGGAGGAGGAG
AGAGAGCACCTGGTTGTCTGCGATGGAATCCGCTCTCTCCTCTTTTACGCGCTCGCGTCC
GGTATTTGTTGCATGCTTCTACAGTTGCCTGGCGTCGTGTATAACACGCGTCTGGGACTG
GATACGGGTGCTGCTGGAGTCGGCCTTATGGGCTAAGGTTTTGGACACCTAACACTCCTC
TCACTTCCAGGTGGGCCCCACTCGTCATCTTTGTCCCTACCTCTAGGTGTCTTTCCATCC
ATGGCTGCCGAAGCACTTGGATGAGGCTTCGTCTAGGTGCACCGCTCCCTCTCCTGTCTG
CAGCAGCCACGGTCACCACGCATCAAGCCTTCATCACCGACACCCCTTCCTTCTCTCCTT
TTTTCTCCCTGCGCAATGGTCGACCACTTTCCCACCATGGCCACATGGCCAAGGCTCCTT
ATCAGCCTTCTCCCTCTATAAAAGGACCCTGTAGCACCCTGCACGTGAGCCACTTCCACG
TTGCATCTTCTTGCGTCCTCCCTCGCCCCATAGAACCGTTGCTTGCCATGGCTAGAGCTT
CATCACCACCATTGATCTCCGCCATCCAGCTGTCCCAACGGGTTATGTGAACTGGCATGA
CAACTTCACCCCGCTACTCCTTGTTCGGCAACCTCACTCCATCGCCGTGAACCGCTGCCA
GCATTGCCTACCTGAGGTCAAGCTTGCTGATCTCCGCATACACAATACCTCACGCTTCCC
CGTCTCCTCTGTTGACACCGCAAGGACCACCGCGGCCGCCTGTTTACATGTTGGCGCCAA
TCCATGATCGTAGCGGTGTCTCCCTGCTCGACCAAAGCACTCTGTCGGAGGTGGGGACAA
AGCTGACAGTGGGGGTCACCTGGCAGTGAGAGGAGCTGCCAGGACATTGCTGTCGGAGAG
AAAGGAGCCGCGCTGATTAGTGTTGCTGAGGGCAGGGGCGATTTGGTCTTTTTTACAAGG
CGCCACACACGCAAAAATCGCTGTTTTTTGGCAAACTTGTAACAGTTCTTCTCTTAGATG
GCAAATTTATAAGAAATATTTGAATGGTGCTATTTGAATTTATGGCATCCGAGAGAGTAG
CAAAAACTATAAAACCCCGAAAAGAGGTGTAGCTTGAGCTTTACTTTTTACCTTTTAGAC
AGTTCAAATTTTTGATAAATCTTTTCTTCTGTATATGGGGGTTTTGATTTATATTTGAGG
ATAAGATTTGGGCACTGAAGAAAAGTTTATGTATCAAGGAATTGTTGACCCACAGCTCAC
ATGCAAGATCTCATATTGCTATATTTTATAGCAACGCTAGATGCTACAGTCGAGTACCTT
CATTGTTCATCACCTAGTAATGTCCGAGAATTTTGTTGAAGCAGGTTGACGGTGCGTTAG
CGGTGGAGTCAGTCCATTTTTCCGAACACTTCATTTCTGCGCTCTCCACCTGCTGGATGC
ATGTAGTAAGTGGTATTGATATTTTGTCCTGTAAAAAAGGAAATCTTACATGCTGAATAG
CAATTAAATTGCAGTTCTTTTTTTTCCATATGAGAAGGGATCACACTAGCCCAAGTGTAA
ATACAGCAGATGTCGCTGTATGCTTCAGCAGACGAGTTCCAGGATCTGATCAAGCAGGCC
CTTTCCTGGGACATCAGGTCGATATCACAGCGGAACCGTCCCCATCAAGTGAGCGTGGAA
GCTGATGCCAACGGCCACTGTGGCGAAGACACTGATGATGACCACCACCACAGGGACACA
GGTCGCTACGGTGTGGTTTACCACTTACATCTTGAAGGCATCGATGTGTCGTATAGGATC
GATCAGGGCTCCAACATTTTCGTCGAGGACGCCACCCTTCTTCCAGACGCCGTCCAGAAA
CGGCATGGTTATTTGGCGTGGAGGGACAAACTTGGCAGCAGCGTTTTGTAGCATGGCCAT
GGCGCAGCGTTTTGTTATCGTTTTCAGGAGTGCTGCAGTGTGGTGTAGGATGTCAGTAGT
GATGCCAATGAATTTGAATGTGGTGGCGTCTAGTATC