Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d020560_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:7:122291284:122296621:-1 gene:Zm00001d020560 gene_biotype:protein_coding transcript_biotype:protein_coding description:Probable xyloglucan glycosyltransferase 8
Sequence

ATGGCGCCGGGCCTGAGGCTGGCCTACCCGTGGGGGAGGGATGTCCGGCGGGGCACGCCG
GTGGTGGTGACCATGGAGAACCCCAACTACTCGGTGGTGGAGATTGACGGGCCCGAGGCG
GAGGCGCTCCGGGCCGGCGTGCCTCCCATGGACAAAGGCCGAGGCCGGGGCCGGAGCGCC
AAGCAGTTCACTTGGGTGCTGCTCCTCCGCGCACACCGTGCCGCCGGGTGCCTCGCCTCG
CTCGCCGCCGTCACCTGGGCGCTGCCGTCTGCCGTCGCGAAGCGTTTCCGGCGGGCCGCC
GCCGCCGAGGGCGTCGGCCGCGGCCGGGGCTGGCTGCTCTACAGGTTCATCAAGGTGCTC
TTGGCGCTCTCCTTGCTCGCCCTCACCGTTGAGCTGGCGGCCTACTGGAAAGGGTGGCAC
TTTCAGAGGCCCAATTTGACTATGCCTGAATTTCATGTGCCGGAGGTGGAGGACATTCAG
GGGTGGCTGCACACGGCGTACCTCGCCTGGATGTCATTCCGAGCTGACTACATCCGACGG
CCGATCGAGTTCTTGTCCAAAGTTTGCATTCTGCTATTTGTTGTCCAATCGTTGGATCGG
CTCGTCTTGTGCATCGCATGCTTCTGGATTAAGCTCAAGAAAATCAAGCCAAGGCTTGAA
GGGGACCCATTCCGGGAGGGTTCAGGGTATCTGCACCCGATGGTACTTGTTCAGATTCCT
ATGTGCAATGAAAAGGAGGTCTATGAGCAGTCGATTTCAGCCGTCTGCCAGCTAGATTGG
CCTAGGGATAAGTTTCTAATCCAGGTGCTTGATGATTCGAGCGACGAGAGCATTCAGATG
TTGATCAAAGCAGAAGTTTCTAAGTGGAACCAGCAGGGTGTGAACATTGTCTATCGGCAT
CGGGTGTTGAGGACTGGGTATAAAGCTGGGAACCTGAACTCTGCAATGAGCTGTGACTAT
GTCAAGAATTTTGAATTTGTTGCCATTTTTGACGCGGACTTCCAACCAAGCACTGATTTT
CTCAAGAAAACAATCCCACATTTTGATGGGAACCCTGAGCTTGGATTAGTTCAAGCCCGT
TGGAGCTTTGTGAATAAGGATGAGAACCTCTTGACCCGCCTTCAAAATATCAACCTTTGC
TTCCACTTTGAAGTGGAGCAGCAGGTCAATGGTGTCTTCCTGAACTTCTTTGGGTTCAAT
GGAACTGCTGGAGTCTGGAGGATCCAAGCTTTAGAAGAATCAGGAGGCTGGCTTGAGCGA
ACAACCGTGGAGGATATGGATATTGCTGTTCGGGCTCACCTGAATGGATGGAAGTTCATC
TTCCTGAATGATGTGAAGGTCTTGTGTGAAGTTCCAGAATCTTATGAAGCATATCGGAAA
CAGCAACACCGGTGGCATTCTGGCCCAATGCACCTTTTCCGGCTGTGCTTTCCGGACATA
ATTACTGCCAAGATCTCCTCATGGAAGAAAGCAAATTTAATACTATTGTTCTTTCTTTTG
AGGAAGTTGATACTTCCTTTCTATTCTTTCACATTATTTTGTGTCATTCTTCCATTAACC
ATGTTTGTTCCCGAGGCCGAGTTGCCTGTGTGGGTCATCTGTTATGTGCCGATTTGCATG
TCCTTCTTGAATATTCTGCCATCCCCAAGATCATTTCCCTTCATTGTACCATACCTCCTC
TTCGAGAACACCATGTCTGTTACCAAATTCAACGCAATGGTGTCCGGGCTGTTCAAACTC
GGGAGCTCCTACGAATGGGTTGTCACCAAGAAGTCTGGCCGATCATCTGAATTGGATCTC
TTGACATCGGAAGAAAAGAATAGGAAGTGCACCACACTTCCTCAGCTCCAGAATCAATTG
CCTGAAAACAGTGAGCTGGTCGAGATCAATGTGCGAAAGGAACAGCGAGAGAAGGTGCCA
AATGACGCCAAAAGGGGTAACAAGATCTACAAGAAAGAGCTTGCTCTTTCTCTGCTCCTG
CTCACCGCTGCGACTCGGAGCCTCTTGTCTGCTCAGGGGATTCATTTCTACTTCCTTCTG
TTCCAGGGGATGTCATTCCTTGCCGTTGGCCTCGATCTAATTGGTGAACAGATAAGTTGA

Peptide Sequence

PEP ID

Zm00001d020560_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:7:122291284:122296621:-1 gene:Zm00001d020560 transcript:Zm00001d020560_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Probable xyloglucan glycosyltransferase 8
Sequence

MAPGLRLAYPWGRDVRRGTPVVVTMENPNYSVVEIDGPEAEALRAGVPPMDKGRGRGRSA
KQFTWVLLLRAHRAAGCLASLAAVTWALPSAVAKRFRRAAAAEGVGRGRGWLLYRFIKVL
LALSLLALTVELAAYWKGWHFQRPNLTMPEFHVPEVEDIQGWLHTAYLAWMSFRADYIRR
PIEFLSKVCILLFVVQSLDRLVLCIACFWIKLKKIKPRLEGDPFREGSGYLHPMVLVQIP
MCNEKEVYEQSISAVCQLDWPRDKFLIQVLDDSSDESIQMLIKAEVSKWNQQGVNIVYRH
RVLRTGYKAGNLNSAMSCDYVKNFEFVAIFDADFQPSTDFLKKTIPHFDGNPELGLVQAR
WSFVNKDENLLTRLQNINLCFHFEVEQQVNGVFLNFFGFNGTAGVWRIQALEESGGWLER
TTVEDMDIAVRAHLNGWKFIFLNDVKVLCEVPESYEAYRKQQHRWHSGPMHLFRLCFPDI
ITAKISSWKKANLILLFFLLRKLILPFYSFTLFCVILPLTMFVPEAELPVWVICYVPICM
SFLNILPSPRSFPFIVPYLLFENTMSVTKFNAMVSGLFKLGSSYEWVVTKKSGRSSELDL
LTSEEKNRKCTTLPQLQNQLPENSELVEINVRKEQREKVPNDAKRGNKIYKKELALSLLL
LTAATRSLLSAQGIHFYFLLFQGMSFLAVGLDLIGEQIS

Transcript Sequence

Transcript ID

Zm00001d020560_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:7:122291284:122296621:-1 gene:Zm00001d020560 gene_biotype:protein_coding transcript_biotype:protein_coding description:Probable xyloglucan glycosyltransferase 8
Sequence

ATGGGAGGAAACAACAGATGAAGGAGGCCGACTGGCCAAGCAGGGCAAGCACACAGTGAC
ACAGCACTGCTCCAGGTACAGGACTGGCAACTCGTGTCCCTTGCCTAGCCGAAAGCTCCG
AAACAGACTGCCATGTTCTTGCAATCCTGCTGTCCGCTTCTCGATCTCGGCGTCTCTGGC
TCTGGGAGTACGCGGTTGCGCCGGCTCGTCCGCGCCCATTTCGCTTGCCGTCAGGACCTG
AGTCCAGACGACACTCTTTACCAAAAAGCACCAGGCATGTTTTCCTGGAACCAGTCACCG
CTTAATCCTGTACCTCTAGTTAGCAAGAACCCTCGGCCGGCCCGCGTCTCTTAAATTTCT
GCCCTTTCGCGCCCGAGGTTCCTTGTTCTTGTTTGCTTGCTGCAGTTCTGTAAAGGCTGT
GGCCACTGGCCAGCACTCTGCGACGTGTATGCGAGTAGAATGAGCTGTTGAAGGGACGAT
GTGAGCGTGGAAACGAGATGTCTCTTTGCGTGTAGTAGTATATGGACGCTCAAATAAAGA
GAAGAGAGCTGTGGATTTGGAATATGAAAGAGTGAGTCTGTTGGCCTCGGGGGGAGATCA
GATAATTGAGATAATGCTGACTTCAATATACGTTCCGTTAAAAATCATGACTTGAGAGAC
GCTAAACTCTCTAAGAAAAATCACGTCAAGAGAACAGAAATACTTTCTATAACGCATACT
TTATCATGACAGTACATTTTATGTTTTTTTATCTTTTACATATATCAAAGTACGTTTCTT
ATACAAAAGTTAGTAATCTCCAAGAGACTATATTTTCAACTCTTGACTCTTTATTTATCT
ATCTATAAAAATTAAACTCTATCTATAAAAATTAAACTCTATATGTAGTATCTCGTTCCA
ACCGTTAGTTTGGCTAGCGATGAGGGCAATTTAGAGAGCCGGATGACTTGGCTAGTTAAG
AGCAACTCCAAGAGACTATGTATATGGTTTTGTAAAGGTAAATTTAGCTAATATTAAAAG
AAAATTGTATCCAATAGACTCTGTAAACGACTCTTCAAATTTAGTGGCTCTCTATTTCTC
CATCTTCGCTCTCCATTTTTGGATAGCCTGCTTCACTCTCTATTCAGTCCGTAAGTTTAC
CGAGTCTGTTGGATTAGCCTACATTTTTTTTTCTCTAAAATCTATTTTAGAGATTAGCTA
AATCAGTAAATTTGTCTAGTATTTTTAGCTAATCTCTTGGAGTTGCTCTAAATGGTTAGT
CTGTTGAAAATTTATTTTACTGTTAAATATTTAAATTTTAACTTGATGAATCATTTGACT
AGTTTCTTGGAGATGCTCTTATCATTTTTTTTTTCGAACAAAATCTAATATACACACAAC
AATAGGAGAACCTGCGTGTGTATATATAATAAAGAGGGATACGATAGCTTTTGTATAAGA
TATATATTTTGGTTTAGTTAAAGGATAAAAAATATATACCACATAATTACGAAGAGGTAT
GCGTATTATAGGTATTCCGTTAGTATAAAATTATAAAAAATTAGAGACTTCCATATTGGC
GTGGACATGTGGACATTTGTTCTAATTGTCTCGGCGGGCGGAGTGAAAAGGAGAAAGGAG
AAGATAAAGCAGAGGATGTGTCATGTGCCCCTCATTAAAAAGGAGGCACAGACGCCGCTG
AGCTCTACTAGTACCACTGCTCCGCTCATCTCTCCTGCGGCGGTGGAAGATTAGGAATTG
AGCCCGCGGCAAGCTCGGGGAGTTACTGTGAATCCATCTGATTCCCACCCACCCGCGCAG
ACGCAGCTGCATTCCGCGATCCCAGGCGGCGGGAGGCGGCTCTTGATGCTAGAGATGCTC
GCTCCGCGTCGTTCTCGGCAGCACCGACGGCGGGTAGGTGGAGGCAGAGGGCCCCGGTGA
GAACAGAAGTGTCAGTGGTGCTGGTGTTCCCTTACCTTCGCCGCTTCGCGAGTGCTGTTC
TTTCCTTCAGTTGTCGGCGGCAATGGCGCCGGGCCTGAGGCTGGCCTACCCGTGGGGGAG
GGATGTCCGGCGGGGCACGCCGGTGGTGGTGACCATGGAGAACCCCAACTACTCGGTGGT
GGAGATTGACGGGCCCGAGGCGGAGGCGCTCCGGGCCGGCGTGCCTCCCATGGACAAAGG
CCGAGGCCGGGGCCGGAGCGCCAAGCAGTTCACTTGGGTGCTGCTCCTCCGCGCACACCG
TGCCGCCGGGTGCCTCGCCTCGCTCGCCGCCGTCACCTGGGCGCTGCCGTCTGCCGTCGC
GAAGCGTTTCCGGCGGGCCGCCGCCGCCGAGGGCGTCGGCCGCGGCCGGGGCTGGCTGCT
CTACAGGTTCATCAAGGTGCTCTTGGCGCTCTCCTTGCTCGCCCTCACCGTTGAGCTGGC
GGCCTACTGGAAAGGGTGGCACTTTCAGAGGCCCAATTTGACTATGCCTGAATTTCATGT
GCCGGAGGTGGAGGACATTCAGGGGTGGCTGCACACGGCGTACCTCGCCTGGATGTCATT
CCGAGCTGACTACATCCGACGGCCGATCGAGTTCTTGTCCAAAGTTTGCATTCTGCTATT
TGTTGTCCAATCGTTGGATCGGCTCGTCTTGTGCATCGCATGCTTCTGGATTAAGCTCAA
GAAAATCAAGCCAAGGCTTGAAGGGGACCCATTCCGGGAGGGTTCAGGGTATCTGCACCC
GATGGTACTTGTTCAGATTCCTATGTGCAATGAAAAGGAGGTCTATGAGCAGTCGATTTC
AGCCGTCTGCCAGCTAGATTGGCCTAGGGATAAGTTTCTAATCCAGGTGCTTGATGATTC
GAGCGACGAGAGCATTCAGATGTTGATCAAAGCAGAAGTTTCTAAGTGGAACCAGCAGGG
TGTGAACATTGTCTATCGGCATCGGGTGTTGAGGACTGGGTATAAAGCTGGGAACCTGAA
CTCTGCAATGAGCTGTGACTATGTCAAGAATTTTGAATTTGTTGCCATTTTTGACGCGGA
CTTCCAACCAAGCACTGATTTTCTCAAGAAAACAATCCCACATTTTGATGGGAACCCTGA
GCTTGGATTAGTTCAAGCCCGTTGGAGCTTTGTGAATAAGGATGAGAACCTCTTGACCCG
CCTTCAAAATATCAACCTTTGCTTCCACTTTGAAGTGGAGCAGCAGGTCAATGGTGTCTT
CCTGAACTTCTTTGGGTTCAATGGAACTGCTGGAGTCTGGAGGATCCAAGCTTTAGAAGA
ATCAGGAGGCTGGCTTGAGCGAACAACCGTGGAGGATATGGATATTGCTGTTCGGGCTCA
CCTGAATGGATGGAAGTTCATCTTCCTGAATGATGTGAAGGTCTTGTGTGAAGTTCCAGA
ATCTTATGAAGCATATCGGAAACAGCAACACCGGTGGCATTCTGGCCCAATGCACCTTTT
CCGGCTGTGCTTTCCGGACATAATTACTGCCAAGATCTCCTCATGGAAGAAAGCAAATTT
AATACTATTGTTCTTTCTTTTGAGGAAGTTGATACTTCCTTTCTATTCTTTCACATTATT
TTGTGTCATTCTTCCATTAACCATGTTTGTTCCCGAGGCCGAGTTGCCTGTGTGGGTCAT
CTGTTATGTGCCGATTTGCATGTCCTTCTTGAATATTCTGCCATCCCCAAGATCATTTCC
CTTCATTGTACCATACCTCCTCTTCGAGAACACCATGTCTGTTACCAAATTCAACGCAAT
GGTGTCCGGGCTGTTCAAACTCGGGAGCTCCTACGAATGGGTTGTCACCAAGAAGTCTGG
CCGATCATCTGAATTGGATCTCTTGACATCGGAAGAAAAGAATAGGAAGTGCACCACACT
TCCTCAGCTCCAGAATCAATTGCCTGAAAACAGTGAGCTGGTCGAGATCAATGTGCGAAA
GGAACAGCGAGAGAAGGTGCCAAATGACGCCAAAAGGGGTAACAAGATCTACAAGAAAGA
GCTTGCTCTTTCTCTGCTCCTGCTCACCGCTGCGACTCGGAGCCTCTTGTCTGCTCAGGG
GATTCATTTCTACTTCCTTCTGTTCCAGGGGATGTCATTCCTTGCCGTTGGCCTCGATCT
AATTGGTGAACAGATAAGTTGATTCCTCGCATGCTATTGTTCTTGTTCAGACAGCATGGG
AATCACACATATGTTCATACATACAGTGATATCAAAATTCTAAATTTCCCATTCATGGTT
TAGAGTTTTGCTTCAGAATTGCAACCCTGCTCAACGACAAAGGGGAGCGCAACTGCCTCC
AGAAAGCCCAACAGTACATAATAAACTGAAGAGTTGATAGCTCTTGTTCATCTGTGAACT
GCGTTGCGGTCTATCTCGCTATCTGTCGGTGGATCTGCTTTTAGAGTAAAGCCAACAGGC
AGACAGTTGGATCAACTGTTGGTGCAGTGACCTTTGTTCTCCCGCGCCATCATCATACCT
TCATAACGGCATCTAGCATTTTGTGTGTGGCGCACCGGCTGCCGGCGGGCGTCACAATTG
CCCTCTCCTTTTCGCTGAAGATGCTATTACAGGGCTCCAGCTACCTCTGTCCTGGTTACT
ACTTACTAGCGATGGCTGGTACCTGCAGTGCAGCAGGTTGCTACTTGTAATTGCTAATGA
GATCTCCGATCCAAGTAGGCACAGTTCAGATGTGCAAAACTGCGAGGTTGTTAAATCTAT
CTCATAATTGTTGAGATGAGATTTTACTTCTTGTCACCTGAGAGTTTCTGAACTGTGCAA
AAAATAAAATAAAAATGGTAAGCTTGCCTTGACAG