Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d020537_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:7:121388769:121395911:-1 gene:Zm00001d020537 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:opaque endosperm5 description: opaque endosperm5
Sequence	ATGCCCGCACCGACCGCCGAGCCGGCGCTCCCGGCGGCCTTCCTCTGCGTCCCGTCCCCG CTCCTCTCCACGCCGCTCCCCGGCGCTGCACTCTCCGCCTCCCCCGCGCCCTCCTCCCAC CATGCCTCCTTCCTCCCGCGCCCGCGCGGCGGGCCCCGAGCGCTCTCCGTCGCCATCTCC GTCCCGGGCCCCACTTTCTCCGTGGCGTCGCGGCTCCATCAGATGTGGGGCGAGTTCGCG CGGTTCGTGCGGCTGCACGGGAACCAAATAGCGCCGCTCGGGTTCGCGTCCATGGGCCTG GGTTTCGGCGGCGGTGGCGGGGATAACGTCGGCGGTGGGGGAGGAGGGGGTGGAGGGGAT GTGGATGGGGTAGGCGAGGTAGAGGAGGCCGCGGCGCGGGCCGAGGCGCCAAAGAAGGTG CTGATCCTCATGAGCGACACGGGCGGCGGTCACCGCGCGTCTGCCGAGGCCATCAAGGCT GCCTTCACCCAGGAGTTCGGCGACGACTACCAGGTATTTGTCACTGATCTGTGGACTGAC CACACTCCATGGCCATTCAATCAACTGCCTAGGAGCTATAGTTTTTTGGTGAAACATGGA CCCTTGTGGAAGATGACATACTATGGTACTGCACCGCGTGTAGTCCATCAGCCTCATTTT GCTGCAACATCCACATTCATAGCAAGAGAAGTGGCAAAAGGTCTAATGAAGTACCAACCA GATGTAATTATCAGTGTACACCCTTTAATGCAACATGTCCCCCTCCGAATTCTAAGATCG AAAGGTCTCTTGGATAAGATCCCATTCGCAACTGTTATCACGGATCTCAGCACTTGTCAC CCAACATGGTTCCATAAGCTTGTCACTAGATGTTACTGTCCATCAACTGAGGTGGAAAAG AGAGCACTGAAAGCTGGACTGAAGCCCGCACAGATTAAAGTCTATGGCCTCCCTGTCCGG CCCTCTTTTGTCAAACCTGTTCGACCGAAGGATGAGCTGCGAAGAGAGTTAGGCATGGAT GAAGATCTGCCTGCTGTTCTATTAATGGGTGGGGGTGAAGGGATGGGTCCTATTGAGGCC ACTGCTAAAGCACTTGGTGATTCTCTGTATGATGAAAACCTAGGGGAACCCACTGGTCAA ATACTTGTAATTTGTGGGCGTAATAAGAAGCTGGTCAATCGATTGCAATCCATAAATTGG AAAGTTCCAGTTCAGGTGAAAGGCTTTGTTACAAAGATGGAAGAATGTATGGGTGCTTGT GATTGTATCATTACAAAGGCAGGACCTGGTACAATTGCAGAGGCAATGATCCGTGGCTTA CCAATTATTCTAAATGATTATATTGCTGGACAGGAAGCTGGCAATGTCCCCTACGTTGTT GAAAACGGATGTGGGAAGTTCTCGAAATCTCCAAAACAAATTGCGAAGATAGTTGCCGAC TGGTTTGGCCCAAGGTCAGACGAATTCAGGGTAATGTCCCAGAATGCCCTCAAGCTAGCA CGACCTGATGCTGTGTTCAAAATCGTCCACGATCTGCACGAGCTCGTCAGGGAAAAATGT TTTGTGCCCCAATATGCATGTGCAACATAA

Peptide Sequence

PEP ID	Zm00001d020537_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:7:121388769:121395911:-1 gene:Zm00001d020537 transcript:Zm00001d020537_T001 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:opaque endosperm5 description: opaque endosperm5
Sequence	MPAPTAEPALPAAFLCVPSPLLSTPLPGAALSASPAPSSHHASFLPRPRGGPRALSVAIS VPGPTFSVASRLHQMWGEFARFVRLHGNQIAPLGFASMGLGFGGGGGDNVGGGGGGGGGD VDGVGEVEEAAARAEAPKKVLILMSDTGGGHRASAEAIKAAFTQEFGDDYQVFVTDLWTD HTPWPFNQLPRSYSFLVKHGPLWKMTYYGTAPRVVHQPHFAATSTFIAREVAKGLMKYQP DVIISVHPLMQHVPLRILRSKGLLDKIPFATVITDLSTCHPTWFHKLVTRCYCPSTEVEK RALKAGLKPAQIKVYGLPVRPSFVKPVRPKDELRRELGMDEDLPAVLLMGGGEGMGPIEA TAKALGDSLYDENLGEPTGQILVICGRNKKLVNRLQSINWKVPVQVKGFVTKMEECMGAC DCIITKAGPGTIAEAMIRGLPIILNDYIAGQEAGNVPYVVENGCGKFSKSPKQIAKIVAD WFGPRSDEFRVMSQNALKLARPDAVFKIVHDLHELVREKCFVPQYACAT

Transcript Sequence

Transcript ID	Zm00001d020537_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:7:121388769:121395911:-1 gene:Zm00001d020537 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:opaque endosperm5 description: opaque endosperm5
Sequence	GAGATCCTCAGGTTGATGCGACGGGAAGATTGGCGGGCGGACACGGACCCAACCCCACGT CCCCACCCAACGCATCGTCCTCGCGAACAAAACCGACGCGCCCACCCCGTCCCGGCTCCG GCTGTGTGGCTCACCTTCCACTTTCCCCCACCTCCACCATCGTGCCTCAGCATCAGCACT CGAATGCCACGAGACTGACCTCTCCCTCGTCGCCGCAGCCGCGATGCCCGCACCGACCGC CGAGCCGGCGCTCCCGGCGGCCTTCCTCTGCGTCCCGTCCCCGCTCCTCTCCACGCCGCT CCCCGGCGCTGCACTCTCCGCCTCCCCCGCGCCCTCCTCCCACCATGCCTCCTTCCTCCC GCGCCCGCGCGGCGGGCCCCGAGCGCTCTCCGTCGCCATCTCCGTCCCGGGCCCCACTTT CTCCGTGGCGTCGCGGCTCCATCAGATGTGGGGCGAGTTCGCGCGGTTCGTGCGGCTGCA CGGGAACCAAATAGCGCCGCTCGGGTTCGCGTCCATGGGCCTGGGTTTCGGCGGCGGTGG CGGGGATAACGTCGGCGGTGGGGGAGGAGGGGGTGGAGGGGATGTGGATGGGGTAGGCGA GGTAGAGGAGGCCGCGGCGCGGGCCGAGGCGCCAAAGAAGGTGCTGATCCTCATGAGCGA CACGGGCGGCGGTCACCGCGCGTCTGCCGAGGCCATCAAGGCTGCCTTCACCCAGGAGTT CGGCGACGACTACCAGGTATTTGTCACTGATCTGTGGACTGACCACACTCCATGGCCATT CAATCAACTGCCTAGGAGCTATAGTTTTTTGGTGAAACATGGACCCTTGTGGAAGATGAC ATACTATGGTACTGCACCGCGTGTAGTCCATCAGCCTCATTTTGCTGCAACATCCACATT CATAGCAAGAGAAGTGGCAAAAGGTCTAATGAAGTACCAACCAGATGTAATTATCAGTGT ACACCCTTTAATGCAACATGTCCCCCTCCGAATTCTAAGATCGAAAGGTCTCTTGGATAA GATCCCATTCGCAACTGTTATCACGGATCTCAGCACTTGTCACCCAACATGGTTCCATAA GCTTGTCACTAGATGTTACTGTCCATCAACTGAGGTGGAAAAGAGAGCACTGAAAGCTGG ACTGAAGCCCGCACAGATTAAAGTCTATGGCCTCCCTGTCCGGCCCTCTTTTGTCAAACC TGTTCGACCGAAGGATGAGCTGCGAAGAGAGTTAGGCATGGATGAAGATCTGCCTGCTGT TCTATTAATGGGTGGGGGTGAAGGGATGGGTCCTATTGAGGCCACTGCTAAAGCACTTGG TGATTCTCTGTATGATGAAAACCTAGGGGAACCCACTGGTCAAATACTTGTAATTTGTGG GCGTAATAAGAAGCTGGTCAATCGATTGCAATCCATAAATTGGAAAGTTCCAGTTCAGGT GAAAGGCTTTGTTACAAAGATGGAAGAATGTATGGGTGCTTGTGATTGTATCATTACAAA GGCAGGACCTGGTACAATTGCAGAGGCAATGATCCGTGGCTTACCAATTATTCTAAATGA TTATATTGCTGGACAGGAAGCTGGCAATGTCCCCTACGTTGTTGAAAACGGATGTGGGAA GTTCTCGAAATCTCCAAAACAAATTGCGAAGATAGTTGCCGACTGGTTTGGCCCAAGGTC AGACGAATTCAGGGTAATGTCCCAGAATGCCCTCAAGCTAGCACGACCTGATGCTGTGTT CAAAATCGTCCACGATCTGCACGAGCTCGTCAGGGAAAAATGTTTTGTGCCCCAATATGC ATGTGCAACATAAAAGGCCGTATCCTCTATTTTGTGTTTGCTTAATTTTTTTAACCCCAT GCGGCACTAGCTATAGCTGATTGTGAGGATTGCGAATATTGATTGATTTGAAACGTTTCC GTAAGAGAAATGAAAAATGTATTGAATGCTCTAGTTTAATTTTCCGAAATACTTTTTCAG GCTAGTACTGTTGTGGGTGCTGCATGCAGATTGGGTTACGAACCCAACCCGATGAAATTT TCAATGGATTACTTGGACGAC