Gene sequences

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SNP Detection
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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d020532_T002
CDS Infomation	cds chromosome:B73_RefGen_v4:7:121214033:121220498:-1 gene:Zm00001d020532 gene_biotype:protein_coding transcript_biotype:protein_coding description:AUGMIN subunit 8
Sequence	ATGGATGCTATTAAGAGCCATGCAAAGAAGGTTGATCTTGTTGATGAGACTCTAAGACCA CCACTAGTTCCATCCGAGAAGCACAATGCTTTCCGAGTGAGGAATGTTGCATCCAGGTGC AAAACTGATCTGGCTGATGCCACTAAGATAAGAAGATGTACATCACCAAGTCTTGGCCAG ACCTCAGCAATTGAAGGCACACCAGCACCCAAAAGAGCTCAGTCTGCAGATAGAAGAAGG CCGACACCTTCAACCCCTCCCTCTAAGGTGTCAACACCCTCAACCCCTGTGTCAAGGTCC ATCACACCAGTTCGTGATACCACTAGAGACTTACACAAGAGTTCCAAGCGTATAGCAAGC ACAAAGGCTCCTGATGGCTTGTGGCCAGCAATGCGTAACTTGTCTTCATCTTTCCAGTCG GAATCTGTGGCTGCACCTACTACTAGAAATGATAAGGTAGTCACGGCTTTGGATTGTAGC AAGGGGCAAGTGAGTGTTCTAACGGAGAGGAAGAGAAGTCCTTTTAGAAGGAAAAACATT GGTGAACATTGTGAGAATGCTCAACCTTCAGAGGAGCCCCCTAAGAGGTTAATTGAGCAA CACAGATGGCCAGCCATGATAGCTGGGCAGGCGCCGAAGAATCTCATGTCAAGAAGCATT GACCTTTCGGACAAAGCTAATATACCAGTCGCATCATCAAATACATCAAGAGGTCTTTCA CCAAGGAAGACGCCTTCTGTCAGACCTGTGCCATCATCAAATACATCAAGAGGCCTTTCA CCAAGGAAGACCCCTTCCGTCGGACCAGTCCCATCATCAAATACATCAAGATGCCCTTCA CCAATGAAGACCCCTTCTGTTGAAGCTTCAGTGAAACTGTCAAATCAGTCATTGGATGAA GTGGCAAGGAGTTTGGCTATTCAATCAAGCAGAAAAGATGATAAGGTAGATTCACAGACA ATAGAGAGATCCAAATCTTTGAGCCGACCAAACAGAACAGTTACTTTTCCTGTTCCAATT CTACAACGCTCATCATCACCAAGCAGAGCATTGCCAGCTACGTCCTCAACTTCCAGGGCC TTTCAGAGCCCATCTCGGACAAGGCCATCAACACCCTGTCAGTCCCAAAGTGTTGGAGCT ATCCAATCAAGCGTTCCATCTTCTCTTATTAACTACATGGTTGATGCGCGGAAAGGAAAG AAGAATGCCAGCCAAATCGAAAATATCCACCAAGTGCGTTTATTGCACAATAGACATTTA CAGTGGCTCTTTATAAATGCTTATGCAGAAGATGCTTTATCTTTTCAAAAGGCTACTGTT GAGAATACCATGTATAATGTTTGGAGGAATACTGTAAACCTGCGGGATTCTGTTAATATG AAAAGAATAATGGTGCAACACTTCCAACAAGAACTCAGGCTTTACAACATTCTGAAAGAG CAGATAGCATTTCTAAAATATGCTGTTGTTTTGGTTCAGATTGCTTACCTTGAACAATGG CCAACGCTAGAAAGGGAGAATAGTATCTCTTTACTAGGGGCAACTGAGGCTCTGAAAGCA AGCACCCTGCGCCTGCCAGTTACATTGGGAGCAAAGGCTAACACAATTGCTCTCAAGAAC GCTGTAAGCTCAGCTGTTGATGTCATGCAAGTTTTGGGCTCATCTGTTTGCTGCATTCAT TCAAAGATCACGGACAGCACATCCTTGGTTTCAGAACTCTCTGTCATAGCAGGACAAGAG AAGATCATGCTTGATGAATGCCGAGAACTCTTAGCTACAGCTGCAAAACTGCAGGTGCAG GAGTCGAGCCTACGGACACATCTTGTGCAACAGAGACAAAGGCTTCAGGATTGA

Peptide Sequence

PEP ID	Zm00001d020532_P002
PEP Infomation	pep chromosome:B73_RefGen_v4:7:121214033:121220498:-1 gene:Zm00001d020532 transcript:Zm00001d020532_T002 gene_biotype:protein_coding transcript_biotype:protein_coding description:AUGMIN subunit 8
Sequence	MDAIKSHAKKVDLVDETLRPPLVPSEKHNAFRVRNVASRCKTDLADATKIRRCTSPSLGQ TSAIEGTPAPKRAQSADRRRPTPSTPPSKVSTPSTPVSRSITPVRDTTRDLHKSSKRIAS TKAPDGLWPAMRNLSSSFQSESVAAPTTRNDKVVTALDCSKGQVSVLTERKRSPFRRKNI GEHCENAQPSEEPPKRLIEQHRWPAMIAGQAPKNLMSRSIDLSDKANIPVASSNTSRGLS PRKTPSVRPVPSSNTSRGLSPRKTPSVGPVPSSNTSRCPSPMKTPSVEASVKLSNQSLDE VARSLAIQSSRKDDKVDSQTIERSKSLSRPNRTVTFPVPILQRSSSPSRALPATSSTSRA FQSPSRTRPSTPCQSQSVGAIQSSVPSSLINYMVDARKGKKNASQIENIHQVRLLHNRHL QWLFINAYAEDALSFQKATVENTMYNVWRNTVNLRDSVNMKRIMVQHFQQELRLYNILKE QIAFLKYAVVLVQIAYLEQWPTLERENSISLLGATEALKASTLRLPVTLGAKANTIALKN AVSSAVDVMQVLGSSVCCIHSKITDSTSLVSELSVIAGQEKIMLDECRELLATAAKLQVQ ESSLRTHLVQQRQRLQD

Transcript Sequence

Transcript ID	Zm00001d020532_T002
Transcript Infomation	cdna chromosome:B73_RefGen_v4:7:121214033:121220498:-1 gene:Zm00001d020532 gene_biotype:protein_coding transcript_biotype:protein_coding description:AUGMIN subunit 8
Sequence	GTTGCCTGTTGGGAGTTCCTCTTAATTCTCTACTTCCCTGCCGCCCGCGGCAACCGTCCT CCCTCCTCCACCTCCACCAGCTGCACTCCCCACGCCGCGCACCCGCCCCTCTGCCCCTCC TCCAGCTCCAAACCGGAAACGCGGGGATACCGCGCCGTCCGCGTGGCGTGTCCGAAGAGA TCCCACGACCCGGCGGGCGGCGCTGCGAGGCTGAAGGCGCGGCGGCGGCGGATTTAAGGG CCTCACCGGCTCGGGATCTCCGCGCGATCGCCGCTGGGCCGCGCGCTCGAGGTATACATT GGTTGTTGCAGCAAGCTGGTTTCTTGAGATCCATATTGATGTGGTTTGTTCTGGAAATTT TTATTCTTCATGGATGCTATTAAGAGCCATGCAAAGAAGGTTGATCTTGTTGATGAGACT CTAAGACCACCACTAGTTCCATCCGAGAAGCACAATGCTTTCCGAGTGAGGAATGTTGCA TCCAGGTGCAAAACTGATCTGGCTGATGCCACTAAGATAAGAAGATGTACATCACCAAGT CTTGGCCAGACCTCAGCAATTGAAGGCACACCAGCACCCAAAAGAGCTCAGTCTGCAGAT AGAAGAAGGCCGACACCTTCAACCCCTCCCTCTAAGGTGTCAACACCCTCAACCCCTGTG TCAAGGTCCATCACACCAGTTCGTGATACCACTAGAGACTTACACAAGAGTTCCAAGCGT ATAGCAAGCACAAAGGCTCCTGATGGCTTGTGGCCAGCAATGCGTAACTTGTCTTCATCT TTCCAGTCGGAATCTGTGGCTGCACCTACTACTAGAAATGATAAGGTAGTCACGGCTTTG GATTGTAGCAAGGGGCAAGTGAGTGTTCTAACGGAGAGGAAGAGAAGTCCTTTTAGAAGG AAAAACATTGGTGAACATTGTGAGAATGCTCAACCTTCAGAGGAGCCCCCTAAGAGGTTA ATTGAGCAACACAGATGGCCAGCCATGATAGCTGGGCAGGCGCCGAAGAATCTCATGTCA AGAAGCATTGACCTTTCGGACAAAGCTAATATACCAGTCGCATCATCAAATACATCAAGA GGTCTTTCACCAAGGAAGACGCCTTCTGTCAGACCTGTGCCATCATCAAATACATCAAGA GGCCTTTCACCAAGGAAGACCCCTTCCGTCGGACCAGTCCCATCATCAAATACATCAAGA TGCCCTTCACCAATGAAGACCCCTTCTGTTGAAGCTTCAGTGAAACTGTCAAATCAGTCA TTGGATGAAGTGGCAAGGAGTTTGGCTATTCAATCAAGCAGAAAAGATGATAAGGTAGAT TCACAGACAATAGAGAGATCCAAATCTTTGAGCCGACCAAACAGAACAGTTACTTTTCCT GTTCCAATTCTACAACGCTCATCATCACCAAGCAGAGCATTGCCAGCTACGTCCTCAACT TCCAGGGCCTTTCAGAGCCCATCTCGGACAAGGCCATCAACACCCTGTCAGTCCCAAAGT GTTGGAGCTATCCAATCAAGCGTTCCATCTTCTCTTATTAACTACATGGTTGATGCGCGG AAAGGAAAGAAGAATGCCAGCCAAATCGAAAATATCCACCAAGTGCGTTTATTGCACAAT AGACATTTACAGTGGCTCTTTATAAATGCTTATGCAGAAGATGCTTTATCTTTTCAAAAG GCTACTGTTGAGAATACCATGTATAATGTTTGGAGGAATACTGTAAACCTGCGGGATTCT GTTAATATGAAAAGAATAATGGTGCAACACTTCCAACAAGAACTCAGGCTTTACAACATT CTGAAAGAGCAGATAGCATTTCTAAAATATGCTGTTGTTTTGGTTCAGATTGCTTACCTT GAACAATGGCCAACGCTAGAAAGGGAGAATAGTATCTCTTTACTAGGGGCAACTGAGGCT CTGAAAGCAAGCACCCTGCGCCTGCCAGTTACATTGGGAGCAAAGGCTAACACAATTGCT CTCAAGAACGCTGTAAGCTCAGCTGTTGATGTCATGCAAGTTTTGGGCTCATCTGTTTGC TGCATTCATTCAAAGATCACGGACAGCACATCCTTGGTTTCAGAACTCTCTGTCATAGCA GGACAAGAGAAGATCATGCTTGATGAATGCCGAGAACTCTTAGCTACAGCTGCAAAACTG CAGGTGCAGGAGTCGAGCCTACGGACACATCTTGTGCAACAGAGACAAAGGCTTCAGGAT TGAAATGGCAACCTGAACAAGATGCAGAAGCCCCAGGCCATGCCATTGAACAGGTAAACT GTGCAAGTTGAACTGCAAACAGAAAAGTAATCTGTAGAGTCTAAACAATAGGAACAAAAC AAATGTTAAACATCCCCTGGAGATTCATGGTGTGATGCCACAACTAACTACCCGCAGTGC ATAGATATGACAGGTTTACTGAAAAAACCTCATCATATGTAAATGGTTTTCACCATATAA TGCACTCCCAGCCTTTTCTAGTATTTTTTGTTTCTTTGTATAGAGTGGATCCCTCCCTCT TTGCCATTGTATTTTTTGACATTTTGAAAGAAATACATAGATAATGGATGAGCTAAGATG GTGATATCATTTTTTTTTT