Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d020521_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:7:120459067:120461400:-1 gene:Zm00001d020521 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger protein 346
Sequence

ATGGAGTTGTTCGCCGCCGGAGACCGCCGCTTCCCCGATCCTCCCAGGCACGACGCTGGT
GCAGAGGACTCGTCGATGCTGGTGATCAGGGACGCACTGCTGTCACAGCTCCAGAAGGAC
CGACTTCGCCAGGAGATCATCCTGGCCGAGCTCGCCAGGATAGAGCGTGCCATGGCCCTG
CGCGCCGCCGACGCCGAGCGTGCCAGCCCGAGGGCGCCCTTCTCCGTCGTCAAGCTCGAG
GAGATGCCGCGCAGCAGAGAAGCGTTTGGTCCTGCAGACCTTATTGTCGCCGCGGATGTG
GACAAAGATATGGAGGAGAAGAAAGATTCCGCAACAAGTCTTCAGGCATCGAGTTTGATT
CACCGCAAGAAGCCTGCCGCCGAATATCTCGTCCGTGAATGCCTGAAGACTTCTTGCGGT
GCTGGTAACGCTGCAGGTCGGCGGCAAAATGCAGCACTTCATGAGACCAAACTACAAGAA
TCCACTGAGACTAGGTTGCCCAAGGAGACGATGCCTCCTTTATCAAAATGGAGGTGTGAC
ATCTGCCGTGTGGAAGCACCGACCGAGGGCCACTTGCAACAGCATTGTGCAGGGCACAAA
CACCAGTCTAAAGTAGCAACCTTGGTGGTACCAAGAACCAATGCCAACAGTCACAAAGCG
AGGGCGGCTGCTGCTGCGAATCCCGGAGACGTGCGTCAATACGACGAAAAGCTACGTCTA
ACCTGGGTCTGCAGGTTCTGCCAATCCAACTGCACCTGCAGATCAGACCTGGAGAGCCAC
CTGAGAGGCAAAAGGCACAAAGCAAAGATCCAGTGCCTGCTGGAAGAATGCAAGAACATG
GCAGTGGTCTATAGCTATAGGTCGCCGAATTCACAGCCAAACCTTGCGACACAGGAAGAG
GACAACGGCCCTGCTTCAGCATGGAATTGCAGCCTGTGCCAAGCCAAGTGCACTTGTCCG
TCAGACTTGGCGAACCACCTAAGAGGCAAGAGACACCAGCTGAATTTTCTGGTTCTACAG
GTGGAAGGCAAGCAGTATCTGTCAGAGTGGGGTTGCGGTATCTGTCAGGCCAAATGTAAC
TCTGTATCTCAGCTGGAGAGCCACTGGAGCAGCAGGGAACACCAGCAGAAGGTAGAAGCT
CTGCGGGGAGGAGGCCGAATCGCAAGCTCTGAGGACGAGGAGATACATAGGACGACGTAT
GTTTGCAAGCTCTGTAATTTGCACTGCAACAGCAAGACTACGCTAGCTGAACACCAAAGT
GGGAAGAACCACACGCTGAAGGCGAAGAAACGGTTGTCGCTGAGTTTTTGCGAGGTCTGC
GATCTGCAATGCAATAGCGAAAAGATGCTCGCTCACCATCGTACTGGGAAGGCTCATTTA
GCAAAGCTTAGCAACTGCTGA

Peptide Sequence

PEP ID

Zm00001d020521_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:7:120459067:120461400:-1 gene:Zm00001d020521 transcript:Zm00001d020521_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger protein 346
Sequence

MELFAAGDRRFPDPPRHDAGAEDSSMLVIRDALLSQLQKDRLRQEIILAELARIERAMAL
RAADAERASPRAPFSVVKLEEMPRSREAFGPADLIVAADVDKDMEEKKDSATSLQASSLI
HRKKPAAEYLVRECLKTSCGAGNAAGRRQNAALHETKLQESTETRLPKETMPPLSKWRCD
ICRVEAPTEGHLQQHCAGHKHQSKVATLVVPRTNANSHKARAAAAANPGDVRQYDEKLRL
TWVCRFCQSNCTCRSDLESHLRGKRHKAKIQCLLEECKNMAVVYSYRSPNSQPNLATQEE
DNGPASAWNCSLCQAKCTCPSDLANHLRGKRHQLNFLVLQVEGKQYLSEWGCGICQAKCN
SVSQLESHWSSREHQQKVEALRGGGRIASSEDEEIHRTTYVCKLCNLHCNSKTTLAEHQS
GKNHTLKAKKRLSLSFCEVCDLQCNSEKMLAHHRTGKAHLAKLSNC

Transcript Sequence

Transcript ID

Zm00001d020521_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:7:120459067:120461400:-1 gene:Zm00001d020521 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger protein 346
Sequence

ATCGCAGCAAAACCATACTCCGTCTCCTCGCTCTATCGCGCTCCATTGATTGCTCTCGCA
ACAAGGACTCCATCGTCTTATCGATGGAGTTGTTCGCCGCCGGAGACCGCCGCTTCCCCG
ATCCTCCCAGGCACGACGCTGGTGCAGAGGACTCGTCGATGCTGGTGATCAGGGACGCAC
TGCTGTCACAGCTCCAGAAGGACCGACTTCGCCAGGAGATCATCCTGGCCGAGCTCGCCA
GGATAGAGCGTGCCATGGCCCTGCGCGCCGCCGACGCCGAGCGTGCCAGCCCGAGGGCGC
CCTTCTCCGTCGTCAAGCTCGAGGAGATGCCGCGCAGCAGAGAAGCGTTTGGTCCTGCAG
ACCTTATTGTCGCCGCGGATGTGGACAAAGATATGGAGGAGAAGAAAGATTCCGCAACAA
GTCTTCAGGCATCGAGTTTGATTCACCGCAAGAAGCCTGCCGCCGAATATCTCGTCCGTG
AATGCCTGAAGACTTCTTGCGGTGCTGGTAACGCTGCAGGTCGGCGGCAAAATGCAGCAC
TTCATGAGACCAAACTACAAGAATCCACTGAGACTAGGTTGCCCAAGGAGACGATGCCTC
CTTTATCAAAATGGAGGTGTGACATCTGCCGTGTGGAAGCACCGACCGAGGGCCACTTGC
AACAGCATTGTGCAGGGCACAAACACCAGTCTAAAGTAGCAACCTTGGTGGTACCAAGAA
CCAATGCCAACAGTCACAAAGCGAGGGCGGCTGCTGCTGCGAATCCCGGAGACGTGCGTC
AATACGACGAAAAGCTACGTCTAACCTGGGTCTGCAGGTTCTGCCAATCCAACTGCACCT
GCAGATCAGACCTGGAGAGCCACCTGAGAGGCAAAAGGCACAAAGCAAAGATCCAGTGCC
TGCTGGAAGAATGCAAGAACATGGCAGTGGTCTATAGCTATAGGTCGCCGAATTCACAGC
CAAACCTTGCGACACAGGAAGAGGACAACGGCCCTGCTTCAGCATGGAATTGCAGCCTGT
GCCAAGCCAAGTGCACTTGTCCGTCAGACTTGGCGAACCACCTAAGAGGCAAGAGACACC
AGCTGAATTTTCTGGTTCTACAGGTGGAAGGCAAGCAGTATCTGTCAGAGTGGGGTTGCG
GTATCTGTCAGGCCAAATGTAACTCTGTATCTCAGCTGGAGAGCCACTGGAGCAGCAGGG
AACACCAGCAGAAGGTAGAAGCTCTGCGGGGAGGAGGCCGAATCGCAAGCTCTGAGGACG
AGGAGATACATAGGACGACGTATGTTTGCAAGCTCTGTAATTTGCACTGCAACAGCAAGA
CTACGCTAGCTGAACACCAAAGTGGGAAGAACCACACGCTGAAGGCGAAGAAACGGTTGT
CGCTGAGTTTTTGCGAGGTCTGCGATCTGCAATGCAATAGCGAAAAGATGCTCGCTCACC
ATCGTACTGGGAAGGCTCATTTAGCAAAGCTTAGCAACTGCTGATTGGGGAGGCTGTGAT
CTGTGGAGCGAAATGCCAGCAACGTCAGTTCATTTTGAAGAGACTTCAGTTGGCTTTTCA
TTTACCGTAATTCATGTTTTTACTGCTACTTTTTGAAATGCTAGCATGCGGTTTCATCAG
ACTGTGTAGTCTGTAGAGTTCCTCCGATGCTCTTTTTATACATTGTTTTTTACGTGGGGA
AGAGTATAAATATTTTATACAACTAAAATATGGTATCGTTTGGTTCACGAAATGTAACGC
AAATGTCAACATGTCAATGGTAACTAGGTGGGTGACCGTGCGTTGCAACGGAGACATATA
ATACCATGATAACTTATATATAAATAGGTATGTGC