Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d020511_T003
CDS Infomation

cds chromosome:B73_RefGen_v4:7:119798846:119803060:1 gene:Zm00001d020511 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ubiquitin-NEDD8-like protein RUB1
Sequence

ATGCAGATCTTCGTGAAGACCCTGACGGGGAAGACCATCACCCTCGAGGTGGAGAGCAGC
GACACCGTCGACAACGTCAAAGCCAAAATCCAGGACAAGGAAGGGATTCCCCCAGATCAA
CAGCGACTGATATTCGCTGGCAAGCAGCTGGAGGATGGACGCACGCTGGCTGACTACAAC
ATCCAAAAGGAGTCAACTCTTCATTTGGTCCTCAGGCTTAGGGGTGGAACCATGATCAAG
GTCAAAACTCTCACTGGGAAAGAGATCGAGATCGACATTGAACCCACTGACTCGATTGAC
AGGATCAAGGAGCGTGTTGAAGAGAAAGAAGGCATTCCTCCCGTGCAGCAAAGGCTCATC
TATGCTGGTAAGCAGCTTGCTGATGACAAGACCGCAAAGGACTACAACATCGAGGGTGGA
TCTGTCCTCCATCTTGTCCTTGCTCTGAGGGGTGGTTACTAG

Peptide Sequence

PEP ID

Zm00001d020511_P003
PEP Infomation

pep chromosome:B73_RefGen_v4:7:119798846:119803060:1 gene:Zm00001d020511 transcript:Zm00001d020511_T003 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ubiquitin-NEDD8-like protein RUB1
Sequence

MQIFVKTLTGKTITLEVESSDTVDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDSIDRIKERVEEKEGIPPVQQRLI
YAGKQLADDKTAKDYNIEGGSVLHLVLALRGGY

Transcript Sequence

Transcript ID

Zm00001d020511_T003
Transcript Infomation

cdna chromosome:B73_RefGen_v4:7:119798846:119803060:1 gene:Zm00001d020511 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ubiquitin-NEDD8-like protein RUB1
Sequence

TGGTAGCGCACCCAGTCACGCCGCCCCGCCGCCGCCCCCTATAAATGCGCCAAGCCCGAG
TTAACCAAATTAAAGAAAAAGGAAATTTTCTTGGGCGTTCTTCGGCTTCGTTGTCACAAG
GTTCGAGTTCGTCACCGTCTAGTACGACTGTGCGAGGGAGGAAGAGGCGAGGAGAAGATG
CAGATCTTCGTGAAGACCCTGACGGGGAAGACCATCACCCTCGAGGTGGAGAGCAGCGAC
ACCGTCGACAACGTCAAAGCCAAAATCCAGGACAAGGAAGGGATTCCCCCAGATCAACAG
CGACTGATATTCGCTGGCAAGCAGCTGGAGGATGGACGCACGCTGGCTGACTACAACATC
CAAAAGGAGTCAACTCTTCATTTGGTCCTCAGGCTTAGGGGTGGAACCATGATCAAGGTC
AAAACTCTCACTGGGAAAGAGATCGAGATCGACATTGAACCCACTGACTCGATTGACAGG
ATCAAGGAGCGTGTTGAAGAGAAAGAAGGCATTCCTCCCGTGCAGCAAAGGCTCATCTAT
GCTGGTAAGCAGCTTGCTGATGACAAGACCGCAAAGGACTACAACATCGAGGGTGGATCT
GTCCTCCATCTTGTCCTTGCTCTGAGGGGTGGTTACTAGTCTAAACCTGATGAACTAGCA
GTCAGATAAACTGTTGTGTTGGCTGCGAAATGTGCAGGCCTGATGTTGAACTTGCAAGGA
GATAGTAACAAATTATCAGCTTTGCGCCTTTGCCCAGTGGAAGGGGCTGTCTTCCAAGTT
ATTGTCTGATATGGAATTGTTCCAGATTATCATGTCTCGGCGTTTACCCATTATTATTAT
TTGATTTGAACCTTGCTATGTTAGTCAGTTTTCATACTTATGGTGTGGTTGCGTCTTCTT
TTTTATACTGTAGTTTGGTTTTGACGGCATTGTTCCAAATTGACTTGCTTTTGCACTGAA
ATACTCTCGTTTTTTTT