Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d020506_T002
CDS Infomation

cds chromosome:B73_RefGen_v4:7:119725473:119728580:-1 gene:Zm00001d020506 gene_biotype:protein_coding transcript_biotype:protein_coding description:26S proteasome non-ATPase regulatory subunit 9

Sequence

ATGGTGGCGCCGGATGTGAAGGCGGAGACGATGAAGCTGATGGATCAGCGGGGTGCCCTA
GAGGCGGAGATGGACGCCATCATCGCCCGCCTCACTGCGGCAGGCGGACCGGGCATCACC
GGCGGCCTCGTCGACGCCGAGGGTTTCCCAAGGTCCGACATCGACATACCGAACGTCCTC
GCCCAGCGCCGGAGGCTTGCTGAATTGCGAAATGACCACAAGGATATTACAAACAAAATT
GGTAAAAATCTTGAGGTTTTACACTCAGCAAAGTTATCAAGGAATGAACAATCAACCTCA
AGGAGATCTGATACAACAGATCCTTCACACTTTGGATCATCTCAAAGTGAACCTATGGAA
GAGGACCATGTGACTGGACTTCCTTTTGCCATGATTGATGAAATCGCTGATGGTTCTCCT
GCTTCTGTGGATGGTTTGCAACTTGGAGATGAGATTGTAAAGTTTGGGAATGTGGAAGCT
GGTGATCAGTTGCAGGAAAGGCTCATGTCTGAAGCTCTTTCCAATGAGGACAGTCAAGTA
TCTTTAGTCATCATTCGCCAGGGATCAGCGGTGAATTTAACAATTACACCAAGGAAGTGG
CATGGAAGAGGACTTCTGGGGTGCCATTTCAGAATGCTATGA

Peptide Sequence

PEP ID

Zm00001d020506_P002
PEP Infomation

pep chromosome:B73_RefGen_v4:7:119725473:119728580:-1 gene:Zm00001d020506 transcript:Zm00001d020506_T002 gene_biotype:protein_coding transcript_biotype:protein_coding description:26S proteasome non-ATPase regulatory subunit 9

Sequence

MVAPDVKAETMKLMDQRGALEAEMDAIIARLTAAGGPGITGGLVDAEGFPRSDIDIPNVL
AQRRRLAELRNDHKDITNKIGKNLEVLHSAKLSRNEQSTSRRSDTTDPSHFGSSQSEPME
EDHVTGLPFAMIDEIADGSPASVDGLQLGDEIVKFGNVEAGDQLQERLMSEALSNEDSQV
SLVIIRQGSAVNLTITPRKWHGRGLLGCHFRML

Transcript Sequence

Transcript ID

Zm00001d020506_T002
Transcript Infomation

cdna chromosome:B73_RefGen_v4:7:119725473:119728580:-1 gene:Zm00001d020506 gene_biotype:protein_coding transcript_biotype:protein_coding description:26S proteasome non-ATPase regulatory subunit 9

Sequence

AGCAAGTTTTGCGGCTGGATGCATTTTAGCGAAGTCAGGTGTCGGCGTATGCCAAATGTC
TCGTTGAGACACCGCTGCAGTGCAGACTCGCCGAAAACGACTCCTCACGAACTAGTCCGT
TTCCGTGCGCCGCTGCTGACGAGGGAGTGGGAGGGATCATGGTGGCGCCGGATGTGAAGG
CGGAGACGATGAAGCTGATGGATCAGCGGGGTGCCCTAGAGGCGGAGATGGACGCCATCA
TCGCCCGCCTCACTGCGGCAGGCGGACCGGGCATCACCGGCGGCCTCGTCGACGCCGAGG
GTTTCCCAAGGTCCGACATCGACATACCGAACGTCCTCGCCCAGCGCCGGAGGCTTGCTG
AATTGCGAAATGACCACAAGGATATTACAAACAAAATTGGTAAAAATCTTGAGGTTTTAC
ACTCAGCAAAGTTATCAAGGAATGAACAATCAACCTCAAGGAGATCTGATACAACAGATC
CTTCACACTTTGGATCATCTCAAAGTGAACCTATGGAAGAGGACCATGTGACTGGACTTC
CTTTTGCCATGATTGATGAAATCGCTGATGGTTCTCCTGCTTCTGTGGATGGTTTGCAAC
TTGGAGATGAGATTGTAAAGTTTGGGAATGTGGAAGCTGGTGATCAGTTGCAGGAAAGGC
TCATGTCTGAAGCTCTTTCCAATGAGGACAGTCAAGTATCTTTAGTCATCATTCGCCAGG
GATCAGCGGTGAATTTAACAATTACACCAAGGAAGTGGCATGGAAGAGGACTTCTGGGGT
GCCATTTCAGAATGCTATGAAGAGTCCGTCGTTCTTCAGCAGGATGCGTTGGTCTATCAT
GCTTGCACTCGTGGAGAGTGGAGACGGCTCTAGCGATGCCATTTCAGCCGCAAAGTGAAC
TGATTTAACCGAATGTGTGACATCTTCCAAAATACTGGTTGCGTGTACTTAACTTGTGGA
GCGCTTGAAACATACTAGTGTACCAGGCTGCCTGTGTTGAGACATTTTACTTGTACACAT
GGTCGGTTTTCGTTCTTCCTCGCTTGCGTATCGGTATCGCACACCAACTTGAAATTGAAA
GTCGTCAACGTTCTTCTAGTT