Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d020486_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:7:118536132:118536971:1 gene:Zm00001d020486 gene_biotype:protein_coding transcript_biotype:protein_coding description:Probable CCR4-associated factor 1 homolog 11
Sequence

ATGGCGACACCTGCCGCAGAGAAGCCGGAAGATGTAGAGATCCGTGAGGTTTGGGCGGAC
AACCTCGAGACAGAGTTCGCCGTGATCCGCGACATCGTCGACGACTATCCGTATGTGGCT
ATGGACACTGAGTTTCCGGGCGTTGTGTGTCGTCCGCTCGGCACTTACAAGTCGGCGGCC
GAGTTCAACTACGCCACTCTTAAAGCTAACGTGGACATGCTGAAGCTTATTCAGCTCGGG
CTCACCTTGTCCGACGAGCATGGTGGGCTGCCGGCGCTAGGCCCAGACGGTCGTCCCTGC
GTCTGGCAGTTCAACTTTCGAGGATTTGACCCTCGGACTGATGTGGCTGCAGCGGACTCC
ATCGATCTTCTACGCCGTAGTGGTATTGACTTCTCTCGCCATGCTGCTGATGGAGTCGAC
TCTCGCTGCTTTGCTGAACTGCTCATGTCCTCCGGCGTAGTATTGAATTCAGATGTGCAT
TGGGTGACTTTTCATAGCGGCTACGACTTTGGCTACCTGCTCAAGCTACTCACTGGCACA
AATCTCCCTGATACGCTGCCAGGATTCTTCGATCTCATCAAGATTTACTTTCCTGTTATC
TACGATATAAAACACTTGATGAGGTTCTCCAATAGCCTCCATGGAGGGCTGAACAAGCTT
GCTGAGCTGCTTGATGTTGCAAGGGTTGGAATCTGCCACCAGGCAGGGTCTGATTCGCTT
CTGACAGCACTGTCTTTCAAGAAGCTTAAAGAGGCATACTTCAACGGATTAACTGAGAAA
TATGCTGGTGTGTTGTATGGGCTTGGCTTTGAGGGTGTAGAGACCACCTCTGCTCACTGA

Peptide Sequence

PEP ID

Zm00001d020486_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:7:118536132:118536971:1 gene:Zm00001d020486 transcript:Zm00001d020486_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Probable CCR4-associated factor 1 homolog 11
Sequence

MATPAAEKPEDVEIREVWADNLETEFAVIRDIVDDYPYVAMDTEFPGVVCRPLGTYKSAA
EFNYATLKANVDMLKLIQLGLTLSDEHGGLPALGPDGRPCVWQFNFRGFDPRTDVAAADS
IDLLRRSGIDFSRHAADGVDSRCFAELLMSSGVVLNSDVHWVTFHSGYDFGYLLKLLTGT
NLPDTLPGFFDLIKIYFPVIYDIKHLMRFSNSLHGGLNKLAELLDVARVGICHQAGSDSL
LTALSFKKLKEAYFNGLTEKYAGVLYGLGFEGVETTSAH

Transcript Sequence

Transcript ID

Zm00001d020486_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:7:118536132:118536971:1 gene:Zm00001d020486 gene_biotype:protein_coding transcript_biotype:protein_coding description:Probable CCR4-associated factor 1 homolog 11
Sequence

ATGGCGACACCTGCCGCAGAGAAGCCGGAAGATGTAGAGATCCGTGAGGTTTGGGCGGAC
AACCTCGAGACAGAGTTCGCCGTGATCCGCGACATCGTCGACGACTATCCGTATGTGGCT
ATGGACACTGAGTTTCCGGGCGTTGTGTGTCGTCCGCTCGGCACTTACAAGTCGGCGGCC
GAGTTCAACTACGCCACTCTTAAAGCTAACGTGGACATGCTGAAGCTTATTCAGCTCGGG
CTCACCTTGTCCGACGAGCATGGTGGGCTGCCGGCGCTAGGCCCAGACGGTCGTCCCTGC
GTCTGGCAGTTCAACTTTCGAGGATTTGACCCTCGGACTGATGTGGCTGCAGCGGACTCC
ATCGATCTTCTACGCCGTAGTGGTATTGACTTCTCTCGCCATGCTGCTGATGGAGTCGAC
TCTCGCTGCTTTGCTGAACTGCTCATGTCCTCCGGCGTAGTATTGAATTCAGATGTGCAT
TGGGTGACTTTTCATAGCGGCTACGACTTTGGCTACCTGCTCAAGCTACTCACTGGCACA
AATCTCCCTGATACGCTGCCAGGATTCTTCGATCTCATCAAGATTTACTTTCCTGTTATC
TACGATATAAAACACTTGATGAGGTTCTCCAATAGCCTCCATGGAGGGCTGAACAAGCTT
GCTGAGCTGCTTGATGTTGCAAGGGTTGGAATCTGCCACCAGGCAGGGTCTGATTCGCTT
CTGACAGCACTGTCTTTCAAGAAGCTTAAAGAGGCATACTTCAACGGATTAACTGAGAAA
TATGCTGGTGTGTTGTATGGGCTTGGCTTTGAGGGTGTAGAGACCACCTCTGCTCACTGA