Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d020418_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:7:112714260:112717015:-1 gene:Zm00001d020418 gene_biotype:protein_coding transcript_biotype:protein_coding description:Cytokinin hydroxylase
Sequence

ATGGCGTTCGTGACGCTCATGGCGTTGGCGTCCCCTGTCCTGCTACTGCTCCTGAGGGCG
GCATGGGTCGCCCTGTCCTGCTACATCCTGACGCCGCTGAGAATCCGCCGGATCATGGCC
CGGCAGGGCGTGCACGGGCCCCCGCCGCGCCCGCTCATCGGCAACCTCCGCGACGTGTCG
GCGCTCATGGCGCAGGCCACCGCCGACGACATGCCGGCCCTGAGCCACGACATCGTCGGC
CGCCTCATGCCGCACTACGTGCTCTGGTCCAGGACGTACGGGAAGCTGTTCGTGTACTGG
TACGGGAGCGAGCCGCGCCTGTGCCTGACGGACGCGGCGCAGATCAAGGAGTTCCTCTCG
TCCAAGTACGCGGCGAACGCCACGGGCAAGTCGTGGCTGCAGCGCCAGGGCACCAGGCAC
TTCATCGGCCGGGGAGTCCTCATGGCCAACGGCGCGCACTGGTCGCACCAGCGCCACGTC
GTCGCGCCGGCGTTCATGCCCGACAAGCTGAAGGGACGCGTGGGTCACATGGTGGAGTGC
ACGAAGCAGACGATCCGGGCGCTTCAGGATGCAGCGTCGGCGCCGTCGTCTGGCGGCGGG
CGGCGTCGCGAGGTGGAGATCTGCGGGTACATGACTCGGCTCACGGGCGACATCATCTCG
CGCACCGAGTTCGACACGAGCTATGATACCGGAAAGCTCATCTTCCATCTCCTCGAGGAC
CTGCAGCGCCTCACCGCGAGCTCCAGCCGCCACCTCTGGATCCCCGGCAGCCAGTACTTC
CCGAGCAAGTACAGAAGAGAGATCAGGCGGCTGAACGGTGAGCTGGAGGCCGTGCTGACG
GAGTCCATCGGGCGGCGCCGGGAGATCGCCGACGAGGGCCGCACGACGTCGGCCTACGGC
CGGGGCCTGCTGGCCATGCTGCTGGCCGAGATGGAAAAGAAGAAGGACGTGGCGGCGGCG
GAGCGGTTCAGCTACGACCTGCAGCTGGTTATCGACGAGTGCAAGACGTTCTTCTTCGCG
GGGCACGACACGTCGGCGCTGCTGCTCACCTGGGCGCTGATGCTGCTCGCCACGCACCCG
GAGTGGCAGGACAGGGCCCGGGCCGAGGTCGCCCGAGTCTGCGGCGAAGACCCGCCGTCG
TACGACGACCTCTCCAAGCTCACCGTGCTGCAGATGATCATCCACGAGACGCTGCGGCTG
TACCCGCCGGCGACGCTGCTGCCCCGGATGGTGTTCGAGGACATCCACCTAACCGGCGGC
CTCCACCTGCCGCGCGGGCTGTCGGTGTGGATCCCGGTGCTGGCCATCCACCACGACGTG
TCCATCTGGGGCCCCGACGCGCACGAGTTCAAGCCGGAGCGGTTCGCTGCGGGCCGGCGC
CCGGCGTTCCTTCCGTTCGCGGCGGGCCCGCGCAACTGTGTCGGGCAGGCGTACGCGCTC
GTCGAGGCTAAGGTCGTGCTCGCCATGCTGCTGTCCCACTTCCGCATCGCCATCTCCGAT
GACTACCGCCACGCGCCGGTGAACGTGCTCACCCTCCGCCCCAAGCACGGCGTGCCCGTC
CACCTCCGGCCGCTGCGGCCGTGA

Peptide Sequence

PEP ID

Zm00001d020418_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:7:112714260:112717015:-1 gene:Zm00001d020418 transcript:Zm00001d020418_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Cytokinin hydroxylase
Sequence

MAFVTLMALASPVLLLLLRAAWVALSCYILTPLRIRRIMARQGVHGPPPRPLIGNLRDVS
ALMAQATADDMPALSHDIVGRLMPHYVLWSRTYGKLFVYWYGSEPRLCLTDAAQIKEFLS
SKYAANATGKSWLQRQGTRHFIGRGVLMANGAHWSHQRHVVAPAFMPDKLKGRVGHMVEC
TKQTIRALQDAASAPSSGGGRRREVEICGYMTRLTGDIISRTEFDTSYDTGKLIFHLLED
LQRLTASSSRHLWIPGSQYFPSKYRREIRRLNGELEAVLTESIGRRREIADEGRTTSAYG
RGLLAMLLAEMEKKKDVAAAERFSYDLQLVIDECKTFFFAGHDTSALLLTWALMLLATHP
EWQDRARAEVARVCGEDPPSYDDLSKLTVLQMIIHETLRLYPPATLLPRMVFEDIHLTGG
LHLPRGLSVWIPVLAIHHDVSIWGPDAHEFKPERFAAGRRPAFLPFAAGPRNCVGQAYAL
VEAKVVLAMLLSHFRIAISDDYRHAPVNVLTLRPKHGVPVHLRPLRP

Transcript Sequence

Transcript ID

Zm00001d020418_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:7:112714260:112717015:-1 gene:Zm00001d020418 gene_biotype:protein_coding transcript_biotype:protein_coding description:Cytokinin hydroxylase
Sequence

CCGGCCCCCAAATCTTTCTGACTCTCTCCTCCTTCAATGGCGTTCGTGACGCTCATGGCG
TTGGCGTCCCCTGTCCTGCTACTGCTCCTGAGGGCGGCATGGGTCGCCCTGTCCTGCTAC
ATCCTGACGCCGCTGAGAATCCGCCGGATCATGGCCCGGCAGGGCGTGCACGGGCCCCCG
CCGCGCCCGCTCATCGGCAACCTCCGCGACGTGTCGGCGCTCATGGCGCAGGCCACCGCC
GACGACATGCCGGCCCTGAGCCACGACATCGTCGGCCGCCTCATGCCGCACTACGTGCTC
TGGTCCAGGACGTACGGGAAGCTGTTCGTGTACTGGTACGGGAGCGAGCCGCGCCTGTGC
CTGACGGACGCGGCGCAGATCAAGGAGTTCCTCTCGTCCAAGTACGCGGCGAACGCCACG
GGCAAGTCGTGGCTGCAGCGCCAGGGCACCAGGCACTTCATCGGCCGGGGAGTCCTCATG
GCCAACGGCGCGCACTGGTCGCACCAGCGCCACGTCGTCGCGCCGGCGTTCATGCCCGAC
AAGCTGAAGGGACGCGTGGGTCACATGGTGGAGTGCACGAAGCAGACGATCCGGGCGCTT
CAGGATGCAGCGTCGGCGCCGTCGTCTGGCGGCGGGCGGCGTCGCGAGGTGGAGATCTGC
GGGTACATGACTCGGCTCACGGGCGACATCATCTCGCGCACCGAGTTCGACACGAGCTAT
GATACCGGAAAGCTCATCTTCCATCTCCTCGAGGACCTGCAGCGCCTCACCGCGAGCTCC
AGCCGCCACCTCTGGATCCCCGGCAGCCAGTACTTCCCGAGCAAGTACAGAAGAGAGATC
AGGCGGCTGAACGGTGAGCTGGAGGCCGTGCTGACGGAGTCCATCGGGCGGCGCCGGGAG
ATCGCCGACGAGGGCCGCACGACGTCGGCCTACGGCCGGGGCCTGCTGGCCATGCTGCTG
GCCGAGATGGAAAAGAAGAAGGACGTGGCGGCGGCGGAGCGGTTCAGCTACGACCTGCAG
CTGGTTATCGACGAGTGCAAGACGTTCTTCTTCGCGGGGCACGACACGTCGGCGCTGCTG
CTCACCTGGGCGCTGATGCTGCTCGCCACGCACCCGGAGTGGCAGGACAGGGCCCGGGCC
GAGGTCGCCCGAGTCTGCGGCGAAGACCCGCCGTCGTACGACGACCTCTCCAAGCTCACC
GTGCTGCAGATGATCATCCACGAGACGCTGCGGCTGTACCCGCCGGCGACGCTGCTGCCC
CGGATGGTGTTCGAGGACATCCACCTAACCGGCGGCCTCCACCTGCCGCGCGGGCTGTCG
GTGTGGATCCCGGTGCTGGCCATCCACCACGACGTGTCCATCTGGGGCCCCGACGCGCAC
GAGTTCAAGCCGGAGCGGTTCGCTGCGGGCCGGCGCCCGGCGTTCCTTCCGTTCGCGGCG
GGCCCGCGCAACTGTGTCGGGCAGGCGTACGCGCTCGTCGAGGCTAAGGTCGTGCTCGCC
ATGCTGCTGTCCCACTTCCGCATCGCCATCTCCGATGACTACCGCCACGCGCCGGTGAAC
GTGCTCACCCTCCGCCCCAAGCACGGCGTGCCCGTCCACCTCCGGCCGCTGCGGCCGTGA
GCGACAAGGCTGAAGACTCCCCTCCTCCGAAAATTTGTTTTGTTCGTTTTGGTGCCCCGG
CCGTGCGCGCCTTCTCGGCTGCAGAGAGTTGTTTCCTGTTCGTCCCCGGTAGCGCCGCTG
ACATGTGAGACCGGCATGTCAGCTGTTGATCAAGGTAGCATGACGCCATAACCTGACGCA
GTGTGCTTAACTGCGTACTACTATATATAAGTGTACCGGTGGAGCTTTTGGTACCGACTT
AGAGAGCATATATGTATGCTGATTAATGATATAATTACATTGACTGATT