Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d020414_T004
CDS Infomation	cds chromosome:B73_RefGen_v4:7:112328689:112335502:-1 gene:Zm00001d020414 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative 1-phosphatidylinositol-3-phosphate 5-kinase FAB1C
Sequence	ATGGTCTCAGAACACAGGAGTGCCAAATTGCTCATTTTAGGAGGTGCACTTGAGTATCAA AAAGTTTCAAATAAATTGGCATCCATAGGGACTATACTCGAACAGGAAAAGGAGTATCTT AAAACTGTTGTGAGCAAGATCGAGTCTAGGCATCCTAATGTCCTTCTAGTTGAGAAAAGC GCCTCATCTTTTGCTCAGGAGCTCTTAGCAAAAGATATTTCTTTAGTTTTGAATGTGAAG AGACCTCTTTTGAACAGAATATCAAGATGCACAGGTGGTCAGATTGCCTCATCAATTGAC AACATTGCCTCAGCTAGGCTTGGACAATGTGACTTGTTCAAGGTGGAGAAAGTCCCAGAA CCCTTATTAGCTGAACATGGAGAAAAGGGGTCAATTAAGACTCTGATGTTCTTTGAAGGC TGTGTGAAGCACTTGGGTTGCACGGTTCTGTTGAGGGGAACATGTCGGGAAGATTTAAAG AAGATTAAGCGTGCAATGCAACTTGCTGTTTTTGCTGCTTATCACCTCTCCTTGGAGACA TCATTCCTTGCTGATGAGGGAGCAACACTTCCGAAAGTTCCTTCAATATCTGTGACAGGT GCACCAAATATTTCTGCTAGTCCTACTGATCATGGCACTTCTGATAGTCTTAAAAATGCT GAAGAGACATATCCACAAAATTCTACTATCAGCCAGATTTTTGAGGTTATCTCTGCATCT TCAACTTTATTACCACTCGCTGGAGTAAGCCAAGGAATCATGCCTGAATGTAGAGCATCA AAATTTCTAGTTGATCCTCTCAACTCTCAAGATCCGTCGAACTTATGCCATCCAAATGTT TCCTGCAATGGTGATTTAATATCTCCATGTTCTGTCAGTGGTTTTAGAGCAACATATGTT GGCACACAACATGGTGGTTCAAACAAGTCTTTGCAATCTTCAATTGCTGCTGATGTCTGG CGTGATGGTGCATTAACTTTGAAACATAGCCAACCATGTCATTCAGAAAACCATAGTAGC AACCCTGCTGCAGGGAATACAGATGACAAAGACAAGCTTTCAGCTGGTTACTTATCTGGT ACTGACAACAATCAGAGTATCTTAGTTTCCCTCTCAAGCACCTGCATTCCCAAAAGCTTT GCATGCCAGCGTTCTCATCTCGTTCGGATCAAGTTTTATGGTAGTTTTGATAAGCCATTA GGGAGGTATCTTCGTGAGGACTTATTTGATCAGGCATATTGCTGCCCATCTTGTAAGGAG CCTTCAGAATCACATGTGAGGTGCTATATGCACCAACATGGCAGCCTAACGATTAGTGTC AGGCGCCTTCAGTCTCAAAAGTTGCCAGGTGAACATGATGGGAGGATATGGATGTGGCAC AGATGCATGAGGTGCAAGCTTAAGGATGGAATGCCACCAGCAACACACAGAGTAATCATG TCTGATGCAGCTTGGGGCTTATCATTTGGCAAGTTCCTGGAGCTCAGCTTTTCGAACCAT ATGACTGCTAACAGGATTGCAAGTTGTGGCCATTCTCTCCAAAGGGATTGTCTTCGCTTT TATGGGTATGGAAATATGGCGGCCGCCTTCCACTATAGTCCCATGATTACTCTGTCTGTT AACCTTCCGCCCCCAGTGCTAGATTTCAATACTCATGCTACACAAGATTGGGTGAAAAGA GAGGCTGTTGAGGTATTTCACACAATGGACTTGCTGCACACTGAGGTATATGATGCACTT AACAATCTTGAGAAGAGTATCATTACTGATGATGATTCAACCAAGACAAGCATACAGAGG CAAATAGTTGAGATGAAAGATTTGCTTAATGTCGAAAGAAATGAGTATGAGGTTTTGCTT CTTCCAGTTATAATGGGGAGTTCTCATTCATTCAAACCAAATATTGATATTTTGGAGCTT AATCGTGTTAGACGTAGTCTCCTCCTAGATGCTCACACTTGGGACCGCAGGTTGTGCGGC ATAGATTCACTCGAAGCAGATAGCCATATTTCCAGAACTGATCCGTTTAATCTAGAGAAA ACCCAAGGAATCAATGAAGGGAGATCTGATTTGCTTCAGACTGTTAGGAAACACGGAGGA ACATATGAAGAACCATGTCCCCAACACTCTTCAGAAAGCCCAAGGAAATCTCTCTTGTCT ACAGAGGGCCATCTGAATGATAAAAAATATGTCATGGTTGAGACAGATTTGCCGGTTGGG CTAGTGGATGGTGATGCAGGTCTTGATTTGATCTTCAACAAATTGAATACATGTGAAGAA GGACGTTGTCTATCAAAATATCCTAGCAAGACAGGACCAGTAGAGAGGTTACCTTCACTT GCATCTATTTTAGCTGACAAAATAGATATGGCATGGTCTGGATTTGGTGAATTAGACTAC AATCTTCCACATGGTTTGAGCAAAGCAAATGAAAATACATCTTTGAACTTGTTTGGCAAT CCAAGTTACAAGAAGGCTACTGGTCCAGTCCGAATCCATTCATTTGATACTGTGTTGAGA TTACATCAGCGAGAACAAACTGGAGTAATACCTGCTTCACTCCATTCAGCACTGAAATCA ATTGATTCCTTTAGAGACTTGACAAGCCTTGTTAAGGATCCAATGACAAACATGCGGAGA GCCTTTTCTCAAATATCTCCCAGGACAAGAGGAAACTTAAATACTGTTCTTACACGTGCT CCCAAGTATATCACATCAGCTTCTCGTATGGTGAATGATGGGGCTCGACTGCTTCTGCCC AATATTAGCTGTGAAGGTTCTGTTTTTGTCACTGTCTATGATGACGAGCCAACCAGTGTA GTGTCATATGCTATGACATCACAAGAATATGCTGAACATGTCACACATAAAATGAATGCA AATACTAGCTTTTCAGATTTTACTAGTAGTAATGGACTTGATGGATCTCTGTCCTCACAT GAAGAGCTTTCAAATTTTAGAGGAGCTCACTTCAGATTATCCTTCGATGATGATGCATCT CCTACTGATAGTACAAAGTTTTCTGTCACTTGCTATTTTGCAAGGCAGTTTGCTGCACTT AGAAAGAAATGTTGTCCAAGTAATAGTGATTACATACGCTCGATAAGTCGTTGTAAGCGA TGGAGCGCGCAAGGTGGAAAAAGCAATGTTTACTTTGCAAAGACAATGGATGAGAGATTC ATAATTAAACAAGTCACCAAGACAGAGCTGGACTCTTTTGTAGAATTTGCTCCTCATTAC TTCAGGCACTTGACAGAATCATTGACTTCTAGAAGCCCTACTTGCCTGGCCAAAATATTG GGGCTTTATCAGGTTAGTATCAAGAATTCAAAAGGTGGGCGTGAGGTGAAGATGGATCTG ATGGTGATGGAGAACATACTCTTCCAAAGATCAATATCTAGGGTGTATGATCTGAAGGGT TCTGTGCGTTCACGTTATAATTCTGATGCTTCTGGTCACAACAAAGTTCTTCTAGACTCT AATCTCATAGAAGCACTACATACAAAGCCTATTTTTTTGGGGAGTAAGGCAAAACAAAGA TTGGAAAGAGCTGTCTGGAATGATACATCATTTCTTGCGTCTTTGGATGTCATGGACTAC TCCCTTTTGGTCGGTGTCGACGAAGAGAAAAAAGAGCTGGTGGTTGGCATCATCGATTTC CTGCGGCAGTACACCTGGGACAAGCAGCTGGAGACATGGGTGAAGGCATCGGGGATCTTA GGGGGCCCCAAGAATGAGTCTCCCACCGTGATTTCTCCAATCCAGTACAAAAAGAGGTTC AGGAAGGCCATGTCGAGGTACTTCCTCGCCGTCCCCGACCAATGGACCTCGAAAGGTGGT TAA

Peptide Sequence

PEP ID	Zm00001d020414_P004
PEP Infomation	pep chromosome:B73_RefGen_v4:7:112328689:112335502:-1 gene:Zm00001d020414 transcript:Zm00001d020414_T004 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative 1-phosphatidylinositol-3-phosphate 5-kinase FAB1C
Sequence	MVSEHRSAKLLILGGALEYQKVSNKLASIGTILEQEKEYLKTVVSKIESRHPNVLLVEKS ASSFAQELLAKDISLVLNVKRPLLNRISRCTGGQIASSIDNIASARLGQCDLFKVEKVPE PLLAEHGEKGSIKTLMFFEGCVKHLGCTVLLRGTCREDLKKIKRAMQLAVFAAYHLSLET SFLADEGATLPKVPSISVTGAPNISASPTDHGTSDSLKNAEETYPQNSTISQIFEVISAS STLLPLAGVSQGIMPECRASKFLVDPLNSQDPSNLCHPNVSCNGDLISPCSVSGFRATYV GTQHGGSNKSLQSSIAADVWRDGALTLKHSQPCHSENHSSNPAAGNTDDKDKLSAGYLSG TDNNQSILVSLSSTCIPKSFACQRSHLVRIKFYGSFDKPLGRYLREDLFDQAYCCPSCKE PSESHVRCYMHQHGSLTISVRRLQSQKLPGEHDGRIWMWHRCMRCKLKDGMPPATHRVIM SDAAWGLSFGKFLELSFSNHMTANRIASCGHSLQRDCLRFYGYGNMAAAFHYSPMITLSV NLPPPVLDFNTHATQDWVKREAVEVFHTMDLLHTEVYDALNNLEKSIITDDDSTKTSIQR QIVEMKDLLNVERNEYEVLLLPVIMGSSHSFKPNIDILELNRVRRSLLLDAHTWDRRLCG IDSLEADSHISRTDPFNLEKTQGINEGRSDLLQTVRKHGGTYEEPCPQHSSESPRKSLLS TEGHLNDKKYVMVETDLPVGLVDGDAGLDLIFNKLNTCEEGRCLSKYPSKTGPVERLPSL ASILADKIDMAWSGFGELDYNLPHGLSKANENTSLNLFGNPSYKKATGPVRIHSFDTVLR LHQREQTGVIPASLHSALKSIDSFRDLTSLVKDPMTNMRRAFSQISPRTRGNLNTVLTRA PKYITSASRMVNDGARLLLPNISCEGSVFVTVYDDEPTSVVSYAMTSQEYAEHVTHKMNA NTSFSDFTSSNGLDGSLSSHEELSNFRGAHFRLSFDDDASPTDSTKFSVTCYFARQFAAL RKKCCPSNSDYIRSISRCKRWSAQGGKSNVYFAKTMDERFIIKQVTKTELDSFVEFAPHY FRHLTESLTSRSPTCLAKILGLYQVSIKNSKGGREVKMDLMVMENILFQRSISRVYDLKG SVRSRYNSDASGHNKVLLDSNLIEALHTKPIFLGSKAKQRLERAVWNDTSFLASLDVMDY SLLVGVDEEKKELVVGIIDFLRQYTWDKQLETWVKASGILGGPKNESPTVISPIQYKKRF RKAMSRYFLAVPDQWTSKGG

Transcript Sequence

Transcript ID	Zm00001d020414_T004
Transcript Infomation	cdna chromosome:B73_RefGen_v4:7:112328689:112335502:-1 gene:Zm00001d020414 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative 1-phosphatidylinositol-3-phosphate 5-kinase FAB1C
Sequence	AGCAATTTTGTTAGAGGAATTGTTTGCTCTAAGAATGTAAGACACAAACGGATGGTCTCA GAACACAGGAGTGCCAAATTGCTCATTTTAGGAGGTGCACTTGAGTATCAAAAAGTTTCA AATAAATTGGCATCCATAGGGACTATACTCGAACAGGAAAAGGAGTATCTTAAAACTGTT GTGAGCAAGATCGAGTCTAGGCATCCTAATGTCCTTCTAGTTGAGAAAAGCGCCTCATCT TTTGCTCAGGAGCTCTTAGCAAAAGATATTTCTTTAGTTTTGAATGTGAAGAGACCTCTT TTGAACAGAATATCAAGATGCACAGGTGGTCAGATTGCCTCATCAATTGACAACATTGCC TCAGCTAGGCTTGGACAATGTGACTTGTTCAAGGTGGAGAAAGTCCCAGAACCCTTATTA GCTGAACATGGAGAAAAGGGGTCAATTAAGACTCTGATGTTCTTTGAAGGCTGTGTGAAG CACTTGGGTTGCACGGTTCTGTTGAGGGGAACATGTCGGGAAGATTTAAAGAAGATTAAG CGTGCAATGCAACTTGCTGTTTTTGCTGCTTATCACCTCTCCTTGGAGACATCATTCCTT GCTGATGAGGGAGCAACACTTCCGAAAGTTCCTTCAATATCTGTGACAGGTGCACCAAAT ATTTCTGCTAGTCCTACTGATCATGGCACTTCTGATAGTCTTAAAAATGCTGAAGAGACA TATCCACAAAATTCTACTATCAGCCAGATTTTTGAGGTTATCTCTGCATCTTCAACTTTA TTACCACTCGCTGGAGTAAGCCAAGGAATCATGCCTGAATGTAGAGCATCAAAATTTCTA GTTGATCCTCTCAACTCTCAAGATCCGTCGAACTTATGCCATCCAAATGTTTCCTGCAAT GGTGATTTAATATCTCCATGTTCTGTCAGTGGTTTTAGAGCAACATATGTTGGCACACAA CATGGTGGTTCAAACAAGTCTTTGCAATCTTCAATTGCTGCTGATGTCTGGCGTGATGGT GCATTAACTTTGAAACATAGCCAACCATGTCATTCAGAAAACCATAGTAGCAACCCTGCT GCAGGGAATACAGATGACAAAGACAAGCTTTCAGCTGGTTACTTATCTGGTACTGACAAC AATCAGAGTATCTTAGTTTCCCTCTCAAGCACCTGCATTCCCAAAAGCTTTGCATGCCAG CGTTCTCATCTCGTTCGGATCAAGTTTTATGGTAGTTTTGATAAGCCATTAGGGAGGTAT CTTCGTGAGGACTTATTTGATCAGGCATATTGCTGCCCATCTTGTAAGGAGCCTTCAGAA TCACATGTGAGGTGCTATATGCACCAACATGGCAGCCTAACGATTAGTGTCAGGCGCCTT CAGTCTCAAAAGTTGCCAGGTGAACATGATGGGAGGATATGGATGTGGCACAGATGCATG AGGTGCAAGCTTAAGGATGGAATGCCACCAGCAACACACAGAGTAATCATGTCTGATGCA GCTTGGGGCTTATCATTTGGCAAGTTCCTGGAGCTCAGCTTTTCGAACCATATGACTGCT AACAGGATTGCAAGTTGTGGCCATTCTCTCCAAAGGGATTGTCTTCGCTTTTATGGGTAT GGAAATATGGCGGCCGCCTTCCACTATAGTCCCATGATTACTCTGTCTGTTAACCTTCCG CCCCCAGTGCTAGATTTCAATACTCATGCTACACAAGATTGGGTGAAAAGAGAGGCTGTT GAGGTATTTCACACAATGGACTTGCTGCACACTGAGGTATATGATGCACTTAACAATCTT GAGAAGAGTATCATTACTGATGATGATTCAACCAAGACAAGCATACAGAGGCAAATAGTT GAGATGAAAGATTTGCTTAATGTCGAAAGAAATGAGTATGAGGTTTTGCTTCTTCCAGTT ATAATGGGGAGTTCTCATTCATTCAAACCAAATATTGATATTTTGGAGCTTAATCGTGTT AGACGTAGTCTCCTCCTAGATGCTCACACTTGGGACCGCAGGTTGTGCGGCATAGATTCA CTCGAAGCAGATAGCCATATTTCCAGAACTGATCCGTTTAATCTAGAGAAAACCCAAGGA ATCAATGAAGGGAGATCTGATTTGCTTCAGACTGTTAGGAAACACGGAGGAACATATGAA GAACCATGTCCCCAACACTCTTCAGAAAGCCCAAGGAAATCTCTCTTGTCTACAGAGGGC CATCTGAATGATAAAAAATATGTCATGGTTGAGACAGATTTGCCGGTTGGGCTAGTGGAT GGTGATGCAGGTCTTGATTTGATCTTCAACAAATTGAATACATGTGAAGAAGGACGTTGT CTATCAAAATATCCTAGCAAGACAGGACCAGTAGAGAGGTTACCTTCACTTGCATCTATT TTAGCTGACAAAATAGATATGGCATGGTCTGGATTTGGTGAATTAGACTACAATCTTCCA CATGGTTTGAGCAAAGCAAATGAAAATACATCTTTGAACTTGTTTGGCAATCCAAGTTAC AAGAAGGCTACTGGTCCAGTCCGAATCCATTCATTTGATACTGTGTTGAGATTACATCAG CGAGAACAAACTGGAGTAATACCTGCTTCACTCCATTCAGCACTGAAATCAATTGATTCC TTTAGAGACTTGACAAGCCTTGTTAAGGATCCAATGACAAACATGCGGAGAGCCTTTTCT CAAATATCTCCCAGGACAAGAGGAAACTTAAATACTGTTCTTACACGTGCTCCCAAGTAT ATCACATCAGCTTCTCGTATGGTGAATGATGGGGCTCGACTGCTTCTGCCCAATATTAGC TGTGAAGGTTCTGTTTTTGTCACTGTCTATGATGACGAGCCAACCAGTGTAGTGTCATAT GCTATGACATCACAAGAATATGCTGAACATGTCACACATAAAATGAATGCAAATACTAGC TTTTCAGATTTTACTAGTAGTAATGGACTTGATGGATCTCTGTCCTCACATGAAGAGCTT TCAAATTTTAGAGGAGCTCACTTCAGATTATCCTTCGATGATGATGCATCTCCTACTGAT AGTACAAAGTTTTCTGTCACTTGCTATTTTGCAAGGCAGTTTGCTGCACTTAGAAAGAAA TGTTGTCCAAGTAATAGTGATTACATACGCTCGATAAGTCGTTGTAAGCGATGGAGCGCG CAAGGTGGAAAAAGCAATGTTTACTTTGCAAAGACAATGGATGAGAGATTCATAATTAAA CAAGTCACCAAGACAGAGCTGGACTCTTTTGTAGAATTTGCTCCTCATTACTTCAGGCAC TTGACAGAATCATTGACTTCTAGAAGCCCTACTTGCCTGGCCAAAATATTGGGGCTTTAT CAGGTTAGTATCAAGAATTCAAAAGGTGGGCGTGAGGTGAAGATGGATCTGATGGTGATG GAGAACATACTCTTCCAAAGATCAATATCTAGGGTGTATGATCTGAAGGGTTCTGTGCGT TCACGTTATAATTCTGATGCTTCTGGTCACAACAAAGTTCTTCTAGACTCTAATCTCATA GAAGCACTACATACAAAGCCTATTTTTTTGGGGAGTAAGGCAAAACAAAGATTGGAAAGA GCTGTCTGGAATGATACATCATTTCTTGCGTCTTTGGATGTCATGGACTACTCCCTTTTG GTCGGTGTCGACGAAGAGAAAAAAGAGCTGGTGGTTGGCATCATCGATTTCCTGCGGCAG TACACCTGGGACAAGCAGCTGGAGACATGGGTGAAGGCATCGGGGATCTTAGGGGGCCCC AAGAATGAGTCTCCCACCGTGATTTCTCCAATCCAGTACAAAAAGAGGTTCAGGAAGGCC ATGTCGAGGTACTTCCTCGCCGTCCCCGACCAATGGACCTCGAAAGGTGGTTAAATCTTC TCGCTGTTTTTAGCTGCATTTTTTTTGTCAGCGAAAGCATCACTCGTTCATCCTTGGCAA ATTTTGAGCGAAAGGGTGACAGACGGCTAGGTATTCTTTATTTGCCTGTTGCTTCCGTTT TTTATACCAACAGGTGACATGCAATAGCTTAGAGCAGATGTGAGAGGACCTCTGACCTGG TGGATGGACTGTGACATTAAGCATGATCATTGCAGTGTCCGGTCACATCTTGAGCGCTTG ATCCAATGTAAATTTGACGGCGAGCCACGGCGGGTTATTTGACGCCGAGTTGCGCCGTAC TGAGGAATTGTATTAGAGGATTGGAACACTGATGTTAATTAATAGACATGTAACAGCGCT CTCAAC