Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d020358_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:7:108893865:108895550:-1 gene:Zm00001d020358 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ubiquitin-protein ligase
Sequence	ATGGGTGCGGCTCGTCCGCGGCGCTGGAAGCTGCCGTTCCACCGCACCGTCAGCGCCGTG GGCGGCGGGGGCGGCGCGCCGTGCTCGCCCTCGTCCAGGTCGTCCTCCTCGCCCGCGCGG TCCGAGGCGTGGGCGGCCGAGGCGGTGCCGGAGGAGTTCCTGTGCCCGATCTCCGGCGCG CTCATGGCGGACCCCGTCATACTGCCGTCGGGGAAGACCTTCGAGCGGGCCTGCCTCCAG GCCTGCGCGGAGCTCGCGTTTCTGCCTCCGGGAGTCGAGGCCGGGGACGCGGACACTGTC ATCCCTAACTCCGCGCTCAAGGCGGCCATCTGCACTTGGTGCGCGCGCTCCGGACGGGAG GTGCCGGCGCCGCCGTCCGCCGAGGCGGCGCGGCAGGCCGTGCAGCGCGCTATGCCTCCG GCGGCTGCCAAGTCCGTGAGGACGACCACCACAAGGCGCGCGGTGGTGATGGCCGCGAGC ACATCAAACTCGTCCACGTCGTCGTACGGGTCGGCCTCGGAGATCACCGCGGCGGAGGAC GAGGCCAAGGCCAAGGAAGAGGCGCCGCGGAGGAGGACGGTCAAGGAAGCGGAGGTGGAG CCGGCGGCGGCGCCGCCGGCTGACCCGCTGGAGGACGATGTGGTGGGCAAGGTGATGGAC GCGGACGACGACGGCGTGGTCGCTGCGGCGATGGGCGCGCTGCGGGAGGCCACGCGCGAG GGCGAGGAGCGGCGGCGCGCGCTATGCACGCCGCGCCTTCTCGGCGCGCTGCGCCGCGTG CTGCTGCTCCCACGCCACGCGGCCGCCCGGGTGGACGCGGTGGCCGCACTGGTCAACCTC TCCCTAGAGCCCGCCAACAAGGTGCGCATCGTGCGCGCGGGGGCAGTGCCGGCGCTCGTC GAGGTGCTCCGGTCGGGCGCGTCGGCGCCCGAGGCGCGGGAGCACGCGGCGGGGGCGCTC TTCGGGCTGGCCCTCAACGAGGACAACCGGGCCGCCATCGGCGTGCTGGGCGCGGTACCA CCGCTCCTCGACCTGCTCACGTCGCCCACCCACGCGCCCCGCGCGCGCCGCGACGCCGGG ATGGCGCTCTACCACCTCACCCTCGCGGCCGTCAACCAGTCCAAGGTCGCGCGCTTCCCC GGCGCGCCCAAGGCGCTGCTCGCCGTGGCCTCGGGCGCCGCGGAGCCGGGGCCCATCCGG AGGCTGGCGCTCATGGTGGCCTGCAACGTGGCCGCCTGCGCCGAGGGCCGCAACGCGCTG ATGGACGCGGGCGGCGTGGCGTCCGTCTCCGGCATCCTCCTCTCGCCTTCTCACGACACC ACCAACGGCGGCGGTGGCACCGCGGACCTGGAGGAGTGGTGCCTGTCGGCGATGTACGCG ATGAGCCGAGGCAGCCTCCGGTTCCGCGGCCTGGCGCTCGCGTCCGGCGCGGACCGGGCG CTCCGGCGCGTGGTGGCCGACGAGGGCGGCGGCGTCCGGCGCGAGATTGCTCGGAAGACC CTCCGCGCCATGCGGAGCGACCTCGACGAGGACGGCGGCGAGTACAACGACCTGACCGGA AGCAGCGCGGAGTGCGGCGACGGTGAGGACTGCGGCGGGAGCATCGTGTCGGACGGGCTC ATGTCGTTCCGGCGCCGGCAGCGCGAGCTCGGCGTCTCGTCGTGCGGCAACACCGCCGAG TTCTGA

Peptide Sequence

PEP ID	Zm00001d020358_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:7:108893865:108895550:-1 gene:Zm00001d020358 transcript:Zm00001d020358_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ubiquitin-protein ligase
Sequence	MGAARPRRWKLPFHRTVSAVGGGGGAPCSPSSRSSSSPARSEAWAAEAVPEEFLCPISGA LMADPVILPSGKTFERACLQACAELAFLPPGVEAGDADTVIPNSALKAAICTWCARSGRE VPAPPSAEAARQAVQRAMPPAAAKSVRTTTTRRAVVMAASTSNSSTSSYGSASEITAAED EAKAKEEAPRRRTVKEAEVEPAAAPPADPLEDDVVGKVMDADDDGVVAAAMGALREATRE GEERRRALCTPRLLGALRRVLLLPRHAAARVDAVAALVNLSLEPANKVRIVRAGAVPALV EVLRSGASAPEAREHAAGALFGLALNEDNRAAIGVLGAVPPLLDLLTSPTHAPRARRDAG MALYHLTLAAVNQSKVARFPGAPKALLAVASGAAEPGPIRRLALMVACNVAACAEGRNAL MDAGGVASVSGILLSPSHDTTNGGGGTADLEEWCLSAMYAMSRGSLRFRGLALASGADRA LRRVVADEGGGVRREIARKTLRAMRSDLDEDGGEYNDLTGSSAECGDGEDCGGSIVSDGL MSFRRRQRELGVSSCGNTAEF

Transcript Sequence

Transcript ID	Zm00001d020358_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:7:108893865:108895550:-1 gene:Zm00001d020358 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ubiquitin-protein ligase
Sequence	ATGGGTGCGGCTCGTCCGCGGCGCTGGAAGCTGCCGTTCCACCGCACCGTCAGCGCCGTG GGCGGCGGGGGCGGCGCGCCGTGCTCGCCCTCGTCCAGGTCGTCCTCCTCGCCCGCGCGG TCCGAGGCGTGGGCGGCCGAGGCGGTGCCGGAGGAGTTCCTGTGCCCGATCTCCGGCGCG CTCATGGCGGACCCCGTCATACTGCCGTCGGGGAAGACCTTCGAGCGGGCCTGCCTCCAG GCCTGCGCGGAGCTCGCGTTTCTGCCTCCGGGAGTCGAGGCCGGGGACGCGGACACTGTC ATCCCTAACTCCGCGCTCAAGGCGGCCATCTGCACTTGGTGCGCGCGCTCCGGACGGGAG GTGCCGGCGCCGCCGTCCGCCGAGGCGGCGCGGCAGGCCGTGCAGCGCGCTATGCCTCCG GCGGCTGCCAAGTCCGTGAGGACGACCACCACAAGGCGCGCGGTGGTGATGGCCGCGAGC ACATCAAACTCGTCCACGTCGTCGTACGGGTCGGCCTCGGAGATCACCGCGGCGGAGGAC GAGGCCAAGGCCAAGGAAGAGGCGCCGCGGAGGAGGACGGTCAAGGAAGCGGAGGTGGAG CCGGCGGCGGCGCCGCCGGCTGACCCGCTGGAGGACGATGTGGTGGGCAAGGTGATGGAC GCGGACGACGACGGCGTGGTCGCTGCGGCGATGGGCGCGCTGCGGGAGGCCACGCGCGAG GGCGAGGAGCGGCGGCGCGCGCTATGCACGCCGCGCCTTCTCGGCGCGCTGCGCCGCGTG CTGCTGCTCCCACGCCACGCGGCCGCCCGGGTGGACGCGGTGGCCGCACTGGTCAACCTC TCCCTAGAGCCCGCCAACAAGGTGCGCATCGTGCGCGCGGGGGCAGTGCCGGCGCTCGTC GAGGTGCTCCGGTCGGGCGCGTCGGCGCCCGAGGCGCGGGAGCACGCGGCGGGGGCGCTC TTCGGGCTGGCCCTCAACGAGGACAACCGGGCCGCCATCGGCGTGCTGGGCGCGGTACCA CCGCTCCTCGACCTGCTCACGTCGCCCACCCACGCGCCCCGCGCGCGCCGCGACGCCGGG ATGGCGCTCTACCACCTCACCCTCGCGGCCGTCAACCAGTCCAAGGTCGCGCGCTTCCCC GGCGCGCCCAAGGCGCTGCTCGCCGTGGCCTCGGGCGCCGCGGAGCCGGGGCCCATCCGG AGGCTGGCGCTCATGGTGGCCTGCAACGTGGCCGCCTGCGCCGAGGGCCGCAACGCGCTG ATGGACGCGGGCGGCGTGGCGTCCGTCTCCGGCATCCTCCTCTCGCCTTCTCACGACACC ACCAACGGCGGCGGTGGCACCGCGGACCTGGAGGAGTGGTGCCTGTCGGCGATGTACGCG ATGAGCCGAGGCAGCCTCCGGTTCCGCGGCCTGGCGCTCGCGTCCGGCGCGGACCGGGCG CTCCGGCGCGTGGTGGCCGACGAGGGCGGCGGCGTCCGGCGCGAGATTGCTCGGAAGACC CTCCGCGCCATGCGGAGCGACCTCGACGAGGACGGCGGCGAGTACAACGACCTGACCGGA AGCAGCGCGGAGTGCGGCGACGGTGAGGACTGCGGCGGGAGCATCGTGTCGGACGGGCTC ATGTCGTTCCGGCGCCGGCAGCGCGAGCTCGGCGTCTCGTCGTGCGGCAACACCGCCGAG TTCTGA