Plant GARDEN
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d020351_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:7:108484538:108486653:-1 gene:Zm00001d020351 gene_biotype:protein_coding transcript_biotype:protein_coding description:Alpha-amylase 1
Sequence

ATGGGGAACAGGCACCTCTGCTGCCTGTGCTTGCTCCTTCTCCTGGGACTGGCGTCCGGC
CAGGTCCTGTTCCAGGCGTTCAACTGGGAGTCGTGGAAGCAGAGCGGCGGATGGTATAAC
CTCCTGATGGGGAAGGTCGACGACATCGCCTCCGCCGGCGTCACGCACGTCTGGCTCCCG
CCGCCGTCGCACTCCGTCTCCACCCAAGGTTACATGCCTGGCCGTCTGTACGACCTGGAC
GCGTCCAAGTACGGGACGGCAGCGGAGCTCAAGTCCCTGATCGCCGCGTTCCACGGCAAG
GGCGTGCAGGTGGTGGCGGACATCGTCATCAACCACCGGTGCGCCGACTACAAGGACGCC
CGCGGCATCTACTGCATCTTCGAGGGCGGCACGCCCGACGGCCGCCTGGACTGGGGCCCC
CACATGATCTGCCGCGACGACACCATATACTCGGACGGCACGGCCAACCTCGACACCGGC
GCCGACTTCGCCGCGGCGCCCGACATCGACCACCTCAACGACCGCGTCCAGCGGGAGCTC
ACCGACTGGCTGCTCTGGCTCAAGTCGTCCGACCTGGGCTTCGACGCCTGGCGCCTCGAC
TTCGCCAAGGGCTACTCCCCCGAGGTCGCCAAGGTCTACGTCGACGCCACGGCCCCGACC
TTCGCCGTCGCCGAGGTATGGAACAGCATGGCGTACGACGGGGACAACAAGCCCGAGTAC
GACCAGGACCCGCACCGGCAGGCGCTGGTGGACTGGGTGGACAGGGTGGGCGGGGCGGCT
TCGCCGGCCACCGTCTTCGACTTCACCACCAAGGGCATCCTCAACGCCGCCGTCGAAGGC
GAGCTGTGGCGGCTCATCGACCCGCAGGGGAAGGCGCCGGGAGTCATCGGCTGGTGGCCT
GCCAAGGCCGTCACCTTTGTCGACAACCACGACACCGGCTCCACGCAGGCCATGTGGCCG
TTCCCCTCCGACAAGGTCATGCAGGGCTACGCCTACATCCTCACGCACCCCGGCAACCCG
TGCATTTTCTACGACCACTTCTTCGACTGGGGGTTTAAGGACGAAATCGCCGCCCTGGTG
GCGGTGCGCAAGCGCAATGGCATCACGCCGACGAGCGAGCTCACCATCCTTGAGCACGAC
GGCGACTCCTATGTGGCGGAGATTGACGGCAAGGTCATCGTAAAGATCGGGTCCAGGTAC
GACGTCGGCCATCTCATCCCGGCGGGTTTTGAGGTTGCCGCCCACGGCAACGACTACGCC
GTCTGGGAGAAAGCCGGCGCCGAACAAGTGACTCGAGCATAA

Peptide Sequence

PEP ID

Zm00001d020351_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:7:108484538:108486653:-1 gene:Zm00001d020351 transcript:Zm00001d020351_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Alpha-amylase 1
Sequence

MGNRHLCCLCLLLLLGLASGQVLFQAFNWESWKQSGGWYNLLMGKVDDIASAGVTHVWLP
PPSHSVSTQGYMPGRLYDLDASKYGTAAELKSLIAAFHGKGVQVVADIVINHRCADYKDA
RGIYCIFEGGTPDGRLDWGPHMICRDDTIYSDGTANLDTGADFAAAPDIDHLNDRVQREL
TDWLLWLKSSDLGFDAWRLDFAKGYSPEVAKVYVDATAPTFAVAEVWNSMAYDGDNKPEY
DQDPHRQALVDWVDRVGGAASPATVFDFTTKGILNAAVEGELWRLIDPQGKAPGVIGWWP
AKAVTFVDNHDTGSTQAMWPFPSDKVMQGYAYILTHPGNPCIFYDHFFDWGFKDEIAALV
AVRKRNGITPTSELTILEHDGDSYVAEIDGKVIVKIGSRYDVGHLIPAGFEVAAHGNDYA
VWEKAGAEQVTRA

Transcript Sequence

Transcript ID

Zm00001d020351_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:7:108484538:108486653:-1 gene:Zm00001d020351 gene_biotype:protein_coding transcript_biotype:protein_coding description:Alpha-amylase 1
Sequence

ACCACACTACTACGCGTCCATTCTCATTCTCAGTATAGAGAGGGGAAGAGGAACAGAGAG
AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG
AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGCAATGGGGAACAGGCACCTCTGCTGC
CTGTGCTTGCTCCTTCTCCTGGGACTGGCGTCCGGCCAGGTCCTGTTCCAGGCGTTCAAC
TGGGAGTCGTGGAAGCAGAGCGGCGGATGGTATAACCTCCTGATGGGGAAGGTCGACGAC
ATCGCCTCCGCCGGCGTCACGCACGTCTGGCTCCCGCCGCCGTCGCACTCCGTCTCCACC
CAAGGTTACATGCCTGGCCGTCTGTACGACCTGGACGCGTCCAAGTACGGGACGGCAGCG
GAGCTCAAGTCCCTGATCGCCGCGTTCCACGGCAAGGGCGTGCAGGTGGTGGCGGACATC
GTCATCAACCACCGGTGCGCCGACTACAAGGACGCCCGCGGCATCTACTGCATCTTCGAG
GGCGGCACGCCCGACGGCCGCCTGGACTGGGGCCCCCACATGATCTGCCGCGACGACACC
ATATACTCGGACGGCACGGCCAACCTCGACACCGGCGCCGACTTCGCCGCGGCGCCCGAC
ATCGACCACCTCAACGACCGCGTCCAGCGGGAGCTCACCGACTGGCTGCTCTGGCTCAAG
TCGTCCGACCTGGGCTTCGACGCCTGGCGCCTCGACTTCGCCAAGGGCTACTCCCCCGAG
GTCGCCAAGGTCTACGTCGACGCCACGGCCCCGACCTTCGCCGTCGCCGAGGTATGGAAC
AGCATGGCGTACGACGGGGACAACAAGCCCGAGTACGACCAGGACCCGCACCGGCAGGCG
CTGGTGGACTGGGTGGACAGGGTGGGCGGGGCGGCTTCGCCGGCCACCGTCTTCGACTTC
ACCACCAAGGGCATCCTCAACGCCGCCGTCGAAGGCGAGCTGTGGCGGCTCATCGACCCG
CAGGGGAAGGCGCCGGGAGTCATCGGCTGGTGGCCTGCCAAGGCCGTCACCTTTGTCGAC
AACCACGACACCGGCTCCACGCAGGCCATGTGGCCGTTCCCCTCCGACAAGGTCATGCAG
GGCTACGCCTACATCCTCACGCACCCCGGCAACCCGTGCATTTTCTACGACCACTTCTTC
GACTGGGGGTTTAAGGACGAAATCGCCGCCCTGGTGGCGGTGCGCAAGCGCAATGGCATC
ACGCCGACGAGCGAGCTCACCATCCTTGAGCACGACGGCGACTCCTATGTGGCGGAGATT
GACGGCAAGGTCATCGTAAAGATCGGGTCCAGGTACGACGTCGGCCATCTCATCCCGGCG
GGTTTTGAGGTTGCCGCCCACGGCAACGACTACGCCGTCTGGGAGAAAGCCGGCGCCGAA
CAAGTGACTCGAGCATAATAGAGTGCTCGAGATACCGATTTGATTCTCAGTACAATGTAC
ACGGGACTGCATTGATAAAATAAGTGGTTTCTCCTCTAATAAGTAAGGGAGCGTAAAAGG
GCAATTGGAGCCATGCATATGTAACCTTAAAATATTGTTGAGTAAAATATAAAGGTGATC
CCTAAATTCTCCTTTTCAAGTCCT