Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d020332_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:7:107145738:107147834:1 gene:Zm00001d020332 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:GRMZM2G315431 description:Ubiquitin-protein ligase
Sequence	ATGCCGCCGCCTCCACCAACGGGCGAACCGAAGCGCCGCCGGCTGCTATCCCTCATGGCA GTCTACCCATGCGAGAGCATCGCGCCGGCGCCTCTGTTCAGCTCGCTTCTCGCACTTGCG GCCGACTTGGCGAGCCAAGGGCTCGGCGCCGACGCCGGCGCCTTCCCTGTTCTCCGGCGC GGCTTACGGCAGGCAGTGCGGATTGCAGGCCTCCTCCTCGCGTTTCTGGAGGAGGTCCAA GACGTGTCAGTGACGAAGACGGCACCTCTGCCATCATCGGCGGTGCTGGGGCTCACGGAG CTGCACGTGGCCATGCAGAAGCTGCGGTTACTCCTCACGGACTGCGCGCGACGGGGCGCG CGGCTGTGGGTGCTCGTGAACGCCGGATTGGCCGCGTCTGAGCTCAGGGTGATTCTCGGG TCCGTCGCTGCGGCCATGGACGCGCTGCCGAAGGACGTCGTGGACGCGTCCGTGGAGGCC GGGGAGCTCGCGCGGCTCATGTCGGAGCATGCGTGGCGCGTGGCCGTGCGTCCGGACGCC AGTGACGAGCGCGCGGCGAGGAGCGTGCGGTCGATACTGGAGCAGTTCAAGAGCGGCGTC TCGCCGGACGCCGAGGACGCGAGGCGGGTGCTAGAGCACATCGGGGTTAGAAGCTGGACC GAGTGCTCCGAGGAGATTGCCTTCCTGGAGGACGAGCTGCGCACGCGGTTGGACGGCGCA GGCGGCGACAGCAGCAGCGACGCGGTGCTCATCAACAGCTTAATGGCAATCCTGGTGTAC TGCCGTGTCGTGCTGTTCGACCAGACCGACGCGAATCCAAAAGCGGACGCGGCGTCACGG CCGGCGAGGTGCCCGGACTGGCTCAGACCGGAGATGTTGCAGTGCCCGATCGCGCTGGAC CTCATGACGGACCCCGTGACTGTGTCTACTGGGCAGACGTACGACCGCGAGTCCATCACC CGGTGGATCAAGGCCGGATGCCACACGTGCCCGGTCACCGGCGAGCGGCTCCGCACCGCC GACGTCGTGCCGAACGCCGCGCTGCGCGGGATCATCGAGCGGATGCTGCTCAGCAACGGC GTCTCGCTTCCGGACCCAAGCAGCTCAGGGCACCGTCACGGCGCGCTCGGCAACACAGCC GTGCCATTCGGGCCGGCCGCCGCGGGCGCGGCCCGCCTCGCCGTCGCCTACGTCGTGGCC CAGCTCTCGATGGGCTCGACGGCGGAGCGCAGGAAGGCGACTTGCGAGGCCCGCAAGCTG TGCAAGCACAACATGTTCTACCGCGCGTGCCTCGTGGAGGCCAACGCCGTGCCGTGGCTG CTGTGCCTCCTGTCCTCGACGGACGCGTCCGTGCAGGACAATGCGGTGGCGTCACTCCTG AACCTGTCGAAGCACCCGCGGGGCCGGGCGGCGCTCTTCGAGGCCGGCGGCGTGGGGCTC GTGGTGGACGTGATTAACGTGGGCGCCAGGGCGGAGGCGCGGCAGAACGCGGCGGCCGTC CTGTTCTACCTGTCGTCGAACGCGGAGCACGCCGAGGAGATTGGGCGCATCCCGGAGGCC ATCCCGACTCTGGTGCAGCTGATCCGCGATGGAGCGCACCGCGGGCGCAAGAACGCCATG GTCAGCCTCTACGGTCTGCTCCAGTGCGCGAGCAACCACGGCAAGGCCGTCGGGGCTGGC GCCGTGTCGGCTCTCGCGGGCCTCCTGTCCGGCGACCGGGACGACCTCGCCAGCGACGCC GTGACGCTGCTGGCGAGGCTCGCGGAGCAGCCGGCGGGCGCGCAGGCCGTGCTGGCGCGG CCGGGCCTGGTCGCCCGCGTCGTCGAGGCGCTCGCCACTTCGGCGTCCCGGTCGGGGAAG GACCACTGCGTGGCCCTGCTGGTCTCGCTGTGCCGGCACGGTGGGGACAAGGTGGTGGCC CTGCTGGGGAGGATGCCGGGGCTGATGTCGTCGCTGTACACGCTGGTGGCCGACGGCAGC CCGCAGACGTGCAAGCGGGCCAGGGCGCTGCTCAACCTGATCCACCGCCATTACGAGATG GACGGCCAGCAGCCGACGTCGGAGGTGCCCGGCGAGCGTGTCGTTCGCGTGCTATAG

Peptide Sequence

PEP ID	Zm00001d020332_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:7:107145738:107147834:1 gene:Zm00001d020332 transcript:Zm00001d020332_T001 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:GRMZM2G315431 description:Ubiquitin-protein ligase
Sequence	MPPPPPTGEPKRRRLLSLMAVYPCESIAPAPLFSSLLALAADLASQGLGADAGAFPVLRR GLRQAVRIAGLLLAFLEEVQDVSVTKTAPLPSSAVLGLTELHVAMQKLRLLLTDCARRGA RLWVLVNAGLAASELRVILGSVAAAMDALPKDVVDASVEAGELARLMSEHAWRVAVRPDA SDERAARSVRSILEQFKSGVSPDAEDARRVLEHIGVRSWTECSEEIAFLEDELRTRLDGA GGDSSSDAVLINSLMAILVYCRVVLFDQTDANPKADAASRPARCPDWLRPEMLQCPIALD LMTDPVTVSTGQTYDRESITRWIKAGCHTCPVTGERLRTADVVPNAALRGIIERMLLSNG VSLPDPSSSGHRHGALGNTAVPFGPAAAGAARLAVAYVVAQLSMGSTAERRKATCEARKL CKHNMFYRACLVEANAVPWLLCLLSSTDASVQDNAVASLLNLSKHPRGRAALFEAGGVGL VVDVINVGARAEARQNAAAVLFYLSSNAEHAEEIGRIPEAIPTLVQLIRDGAHRGRKNAM VSLYGLLQCASNHGKAVGAGAVSALAGLLSGDRDDLASDAVTLLARLAEQPAGAQAVLAR PGLVARVVEALATSASRSGKDHCVALLVSLCRHGGDKVVALLGRMPGLMSSLYTLVADGS PQTCKRARALLNLIHRHYEMDGQQPTSEVPGERVVRVL

Transcript Sequence

Transcript ID	Zm00001d020332_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:7:107145738:107147834:1 gene:Zm00001d020332 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:GRMZM2G315431 description:Ubiquitin-protein ligase
Sequence	ATGCCGCCGCCTCCACCAACGGGCGAACCGAAGCGCCGCCGGCTGCTATCCCTCATGGCA GTCTACCCATGCGAGAGCATCGCGCCGGCGCCTCTGTTCAGCTCGCTTCTCGCACTTGCG GCCGACTTGGCGAGCCAAGGGCTCGGCGCCGACGCCGGCGCCTTCCCTGTTCTCCGGCGC GGCTTACGGCAGGCAGTGCGGATTGCAGGCCTCCTCCTCGCGTTTCTGGAGGAGGTCCAA GACGTGTCAGTGACGAAGACGGCACCTCTGCCATCATCGGCGGTGCTGGGGCTCACGGAG CTGCACGTGGCCATGCAGAAGCTGCGGTTACTCCTCACGGACTGCGCGCGACGGGGCGCG CGGCTGTGGGTGCTCGTGAACGCCGGATTGGCCGCGTCTGAGCTCAGGGTGATTCTCGGG TCCGTCGCTGCGGCCATGGACGCGCTGCCGAAGGACGTCGTGGACGCGTCCGTGGAGGCC GGGGAGCTCGCGCGGCTCATGTCGGAGCATGCGTGGCGCGTGGCCGTGCGTCCGGACGCC AGTGACGAGCGCGCGGCGAGGAGCGTGCGGTCGATACTGGAGCAGTTCAAGAGCGGCGTC TCGCCGGACGCCGAGGACGCGAGGCGGGTGCTAGAGCACATCGGGGTTAGAAGCTGGACC GAGTGCTCCGAGGAGATTGCCTTCCTGGAGGACGAGCTGCGCACGCGGTTGGACGGCGCA GGCGGCGACAGCAGCAGCGACGCGGTGCTCATCAACAGCTTAATGGCAATCCTGGTGTAC TGCCGTGTCGTGCTGTTCGACCAGACCGACGCGAATCCAAAAGCGGACGCGGCGTCACGG CCGGCGAGGTGCCCGGACTGGCTCAGACCGGAGATGTTGCAGTGCCCGATCGCGCTGGAC CTCATGACGGACCCCGTGACTGTGTCTACTGGGCAGACGTACGACCGCGAGTCCATCACC CGGTGGATCAAGGCCGGATGCCACACGTGCCCGGTCACCGGCGAGCGGCTCCGCACCGCC GACGTCGTGCCGAACGCCGCGCTGCGCGGGATCATCGAGCGGATGCTGCTCAGCAACGGC GTCTCGCTTCCGGACCCAAGCAGCTCAGGGCACCGTCACGGCGCGCTCGGCAACACAGCC GTGCCATTCGGGCCGGCCGCCGCGGGCGCGGCCCGCCTCGCCGTCGCCTACGTCGTGGCC CAGCTCTCGATGGGCTCGACGGCGGAGCGCAGGAAGGCGACTTGCGAGGCCCGCAAGCTG TGCAAGCACAACATGTTCTACCGCGCGTGCCTCGTGGAGGCCAACGCCGTGCCGTGGCTG CTGTGCCTCCTGTCCTCGACGGACGCGTCCGTGCAGGACAATGCGGTGGCGTCACTCCTG AACCTGTCGAAGCACCCGCGGGGCCGGGCGGCGCTCTTCGAGGCCGGCGGCGTGGGGCTC GTGGTGGACGTGATTAACGTGGGCGCCAGGGCGGAGGCGCGGCAGAACGCGGCGGCCGTC CTGTTCTACCTGTCGTCGAACGCGGAGCACGCCGAGGAGATTGGGCGCATCCCGGAGGCC ATCCCGACTCTGGTGCAGCTGATCCGCGATGGAGCGCACCGCGGGCGCAAGAACGCCATG GTCAGCCTCTACGGTCTGCTCCAGTGCGCGAGCAACCACGGCAAGGCCGTCGGGGCTGGC GCCGTGTCGGCTCTCGCGGGCCTCCTGTCCGGCGACCGGGACGACCTCGCCAGCGACGCC GTGACGCTGCTGGCGAGGCTCGCGGAGCAGCCGGCGGGCGCGCAGGCCGTGCTGGCGCGG CCGGGCCTGGTCGCCCGCGTCGTCGAGGCGCTCGCCACTTCGGCGTCCCGGTCGGGGAAG GACCACTGCGTGGCCCTGCTGGTCTCGCTGTGCCGGCACGGTGGGGACAAGGTGGTGGCC CTGCTGGGGAGGATGCCGGGGCTGATGTCGTCGCTGTACACGCTGGTGGCCGACGGCAGC CCGCAGACGTGCAAGCGGGCCAGGGCGCTGCTCAACCTGATCCACCGCCATTACGAGATG GACGGCCAGCAGCCGACGTCGGAGGTGCCCGGCGAGCGTGTCGTTCGCGTGCTATAG