Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d020306_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:7:105042700:105045690:1 gene:Zm00001d020306 gene_biotype:protein_coding transcript_biotype:protein_coding description:Strictosidine synthase 3
Sequence	ATGGCAGCTGCTGCCACTCGTTCATTGCACTCCTTCCTCGCGCTTCTTCTCCTGTTGGCA GCTGCGGCCGCGGCTGCGGCGCTGTCGTACGAAACCAAGTCCATAGATCCTGGACTCGTC GTGATGACGCTGCCGGAGCCGGTGTCCGGGCCGGAGAGTCTCGCCTTCGACGGGCGTGGC GGCGGGCCCTACTCCGGCGTCTCCGACGGCCGCGTCCTCCGGTGGCAAGGTCCCCTCCGG GGATGGACCGAGTTCGCCTACAACTCCAAGCACAGGAGCGTGGCGTTGTGCGCGCCGGAC AAGAAGCTGGTAGTGCCGGAGAGCCTGTGCGGGCGCCCGCTGGGCCTGCAGTTCCACCGG CAGTCCGGCGACCTTTACGTCGCCGACGCCTACCTGGGGCTGCTCAGGGTTGCCGCGCGC GGCGGGCTGGCGCAGGTCGTGGCGACGGAGGCCGCCGGGGGGCCGTTCAACTTCCTCAAC GGGCTCGACGTCGACCAGCGGACCGGCGACGTCTACTTCACCGATAGCAGCGCCACGTAC AGGAGGAGCGACTACCTGCTGGTGGTGGCCATGGGCGACGAGACGGGCCGCCTGCTGCGC TACGAGCGGCGGACCGGGCGCGTGGGCGTGCTCCAGGCGGGCCTGTCGTACCCGAACGGC GTGGCGGTGAGCGCGGACGGCACGCACGTGGTGGTGGCGCACACGGCGCTTTGCGAGCTG CGGAGGTACTGGATCCGCGGCGCCCGGGCGGGCACGTCCGACACCTTCGCCGAGCTGCCG GGGTACCCGGACAACCTGCGCGCCGACGGCCGCGGCGGGTACTGGGTAGCGCTGAGCAGC GGCGTCGCGGCTGATGAGGCGGCCGCCGCGCCCACGGTCGCCGTCAGGGTCTCCCGCGAC GGCAACGTGACGGAGGCGCTTGACGGGTTCAGCTTCGTGTCCGTCAGCGAGGTGGCCCAG CGCGGCGGCGCGCTCTGGGTCGGCTCCGTGGACACGCCGTACGCCGGCCAGCTCAAGCGG CGTGCCAGCTAG

Peptide Sequence

PEP ID	Zm00001d020306_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:7:105042700:105045690:1 gene:Zm00001d020306 transcript:Zm00001d020306_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Strictosidine synthase 3
Sequence	MAAAATRSLHSFLALLLLLAAAAAAAALSYETKSIDPGLVVMTLPEPVSGPESLAFDGRG GGPYSGVSDGRVLRWQGPLRGWTEFAYNSKHRSVALCAPDKKLVVPESLCGRPLGLQFHR QSGDLYVADAYLGLLRVAARGGLAQVVATEAAGGPFNFLNGLDVDQRTGDVYFTDSSATY RRSDYLLVVAMGDETGRLLRYERRTGRVGVLQAGLSYPNGVAVSADGTHVVVAHTALCEL RRYWIRGARAGTSDTFAELPGYPDNLRADGRGGYWVALSSGVAADEAAAAPTVAVRVSRD GNVTEALDGFSFVSVSEVAQRGGALWVGSVDTPYAGQLKRRAS

Transcript Sequence

Transcript ID	Zm00001d020306_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:7:105042700:105045690:1 gene:Zm00001d020306 gene_biotype:protein_coding transcript_biotype:protein_coding description:Strictosidine synthase 3
Sequence	CTGCATCGGCACGTCAATTTACTACTAGCACTCTATCAGTAGTGTTCAGCTGCTCCCGAG CTAGCGAGCGAAGCACTGTCGGCACAGTAACCCCCCCCTGTGCGCGTCGCGTGCCGAGTG CCGCAGAGCACGAGAAGCTAGGCCGCACAGCAAGCTTGACATCATGGCAGCTGCTGCCAC TCGTTCATTGCACTCCTTCCTCGCGCTTCTTCTCCTGTTGGCAGCTGCGGCCGCGGCTGC GGCGCTGTCGTACGAAACCAAGTCCATAGATCCTGGACTCGTCGTGATGACGCTGCCGGA GCCGGTGTCCGGGCCGGAGAGTCTCGCCTTCGACGGGCGTGGCGGCGGGCCCTACTCCGG CGTCTCCGACGGCCGCGTCCTCCGGTGGCAAGGTCCCCTCCGGGGATGGACCGAGTTCGC CTACAACTCCAAGCACAGGAGCGTGGCGTTGTGCGCGCCGGACAAGAAGCTGGTAGTGCC GGAGAGCCTGTGCGGGCGCCCGCTGGGCCTGCAGTTCCACCGGCAGTCCGGCGACCTTTA CGTCGCCGACGCCTACCTGGGGCTGCTCAGGGTTGCCGCGCGCGGCGGGCTGGCGCAGGT CGTGGCGACGGAGGCCGCCGGGGGGCCGTTCAACTTCCTCAACGGGCTCGACGTCGACCA GCGGACCGGCGACGTCTACTTCACCGATAGCAGCGCCACGTACAGGAGGAGCGACTACCT GCTGGTGGTGGCCATGGGCGACGAGACGGGCCGCCTGCTGCGCTACGAGCGGCGGACCGG GCGCGTGGGCGTGCTCCAGGCGGGCCTGTCGTACCCGAACGGCGTGGCGGTGAGCGCGGA CGGCACGCACGTGGTGGTGGCGCACACGGCGCTTTGCGAGCTGCGGAGGTACTGGATCCG CGGCGCCCGGGCGGGCACGTCCGACACCTTCGCCGAGCTGCCGGGGTACCCGGACAACCT GCGCGCCGACGGCCGCGGCGGGTACTGGGTAGCGCTGAGCAGCGGCGTCGCGGCTGATGA GGCGGCCGCCGCGCCCACGGTCGCCGTCAGGGTCTCCCGCGACGGCAACGTGACGGAGGC GCTTGACGGGTTCAGCTTCGTGTCCGTCAGCGAGGTGGCCCAGCGCGGCGGCGCGCTCTG GGTCGGCTCCGTGGACACGCCGTACGCCGGCCAGCTCAAGCGGCGTGCCAGCTAGTGCCG TGCCGTTTTGTCATCCATTGATATCATATATGCAGTTGTGTTGCGTGTGCATGCACCGTG AACAACATTTGACTGTACGTACCCCAATGTCGTCGTCGTCGTCGTCTCGTAGCTAGTGTT CGTCGCAATTGTGGATGTGGACTCCGTTCGTGGAATGGTTAGTGGTTGTTTGGTCTCTGG TGATC