Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d020238_T005
CDS Infomation	cds chromosome:B73_RefGen_v4:7:101652891:101657949:-1 gene:Zm00001d020238 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein HOTHEAD
Sequence	ATGGCGTTGAGCGGCAGAGCTCTGCTCTTGTTCAAGCTGCTGCTGCTGCTGCTGGCGTGC CTGCTCTTCCTCTTGGAGCTGTCCCGAGGCAAGGAAGAAGCATTCAGCCTGAGGAACCTC CCGCCCTTCCACAAGGCCAGCAGCTACCCCGCGGGGTGCCCGACGACGTACGACTACATC ATCGTCGGCGGCGGCACCGCGGGGTGCCCGCTGGCGGCGACGCTGTCGCACAGGTACAGG GTGCTGCTGCTGGAGCGCGGAGGCTCCCCGTACGGCGACCGCAACGTCTCCTACATGCAG AACTTCCACATCGGGCTCATGAACATGGCGCCGGACTCGCCGTCGCAGGCCTTCATCTCC ACCGACGGCGTCATCAATGCCCGGGCGAGGGTGTTGGGCGGTGGGACCTGCATCAATGCC GGCTTCTACAGCCGGGCCAGCCCAAGCTTTATCCAGGAGGCCGGCTGGGATGAAGACCTG GTGAACAAATCATACCCTTGGGTAGAGGACAAGATTGTCCAGTGGCCTAAGATCGCGCCT TGGCAGGCGGCGCTACGGGATGGGCTGCTACAAGCAGGTGTAGCCCCCTTCAATGGGTAC ACCTACGATCATGTCTCTGGAACAAAGGTGGGTGGCACCATCTTTGACGAGACTGGGTAC CGCCACACAGCTGCCGACTTACTAGCAGCTGGAGATGCTAGCAACCTGAAGGTGCTGCTC CACGCTAGTGTGCACAAGATAGTGTTTGGCTCGCGACAAGGACGACTGAAGGCAAGAGCC ATCGGAGTCGAATTCACTGATGAGGATGGGAGACACCACCAGGCATTCTTGAACAGCAAC AGAGACAGTGAAGTAATTGTATCTGCTGGTGCGATCGGCACCCCCCAGCTGCTGCTGCTC AGTGGGATCGGGCCCAAGAACGACCTCAAGAATCATAACATTCCAGTGGTTCTCCATAAC AGATATGTGGGTAAAGGGATGGCTGACAACCCCATGAACTCCATATTCATACCAACAAGA AGCCCTCCTCGGCAGTCTCTCATTGAAACTGTTGGAATAACTGAAGAAGGCGTGTTCATT GAGGCCAGCAGCGGGTTTGGTCAGTCGTCGGAGAGTGTCCACTGCCACCATGGAATCATG TCTGCTGAGATTGGACAGCTGTCTACCATTCCTCCGAAGCAAAGAACCCTGGAAGCAGCC CAGAAATACGCCCATAACAAACTTAATCTGCCCAAAGAGGTATTCCACGGCGGTTTTATA CTTGAAAAGATTGATGGTCCGATGTCCACAGGCCATCTGGTCCTCACAGACACTGATGTC CGGAACAATCCAGCAGTTACCTTCAACTACTTCAGTCATCCACAGGATCTCAATCGCTGT ATCTATGGTATCAAGACCATTGAAAGGATACTCAAGACAAACCGTTTCTCTGAACTCTCT GCTGATGGTGCTGGGTTATCGATGGAAAGGGTGCTCAATATGAGCGTGCAGGCTAATGTG AACCTGATACCGAAGCATACAAATGACACAGAATCCCTGGAGCAGTTTTGCAAGGACACT GTGATCACCATCTGGCATTATCATGGTGGGTGCCATGTAGGGAAGGTGGTTGACCAGCAT TACCGGGTGCTTGGAGTTTCAGGTCTCCGGGTGGTTGACGGCTCAATATTTTCTAAATCG CCAGGGACCAACCCTCAAGCTACAGTTATGATGATGGGCAGATATATGGGAGTGAAGATC CTAAGGGAAAGGCTGGGACGAGCAGCTGGAGTGTAG

Peptide Sequence

PEP ID	Zm00001d020238_P005
PEP Infomation	pep chromosome:B73_RefGen_v4:7:101652891:101657949:-1 gene:Zm00001d020238 transcript:Zm00001d020238_T005 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein HOTHEAD
Sequence	MALSGRALLLFKLLLLLLACLLFLLELSRGKEEAFSLRNLPPFHKASSYPAGCPTTYDYI IVGGGTAGCPLAATLSHRYRVLLLERGGSPYGDRNVSYMQNFHIGLMNMAPDSPSQAFIS TDGVINARARVLGGGTCINAGFYSRASPSFIQEAGWDEDLVNKSYPWVEDKIVQWPKIAP WQAALRDGLLQAGVAPFNGYTYDHVSGTKVGGTIFDETGYRHTAADLLAAGDASNLKVLL HASVHKIVFGSRQGRLKARAIGVEFTDEDGRHHQAFLNSNRDSEVIVSAGAIGTPQLLLL SGIGPKNDLKNHNIPVVLHNRYVGKGMADNPMNSIFIPTRSPPRQSLIETVGITEEGVFI EASSGFGQSSESVHCHHGIMSAEIGQLSTIPPKQRTLEAAQKYAHNKLNLPKEVFHGGFI LEKIDGPMSTGHLVLTDTDVRNNPAVTFNYFSHPQDLNRCIYGIKTIERILKTNRFSELS ADGAGLSMERVLNMSVQANVNLIPKHTNDTESLEQFCKDTVITIWHYHGGCHVGKVVDQH YRVLGVSGLRVVDGSIFSKSPGTNPQATVMMMGRYMGVKILRERLGRAAGV

Transcript Sequence

Transcript ID	Zm00001d020238_T005
Transcript Infomation	cdna chromosome:B73_RefGen_v4:7:101652891:101657949:-1 gene:Zm00001d020238 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein HOTHEAD
Sequence	CAGCACTCTCATCTGATGTGGCCTGCAAGCTTGCAATCCCTCCAACGACACACGCCGGCC GGCCGGCTACATATAAACCAGCTCCAATACAACGCCACTAGCCGGGTCGAGAGGTGGGGA GCAGAGGGTTCAAGGGAGGGGACAGGTCGAGCAGCTCACCTTTCTCTGCTCGAGAACGAG AGGAGCTCCCGTCTTTTGCTTGCTGTGCCGGGCGCTGCTGAAGGTTCAGCTCAGTCCGAT GGCGTTGAGCGGCAGAGCTCTGCTCTTGTTCAAGCTGCTGCTGCTGCTGCTGGCGTGCCT GCTCTTCCTCTTGGAGCTGTCCCGAGGCAAGGAAGAAGCATTCAGCCTGAGGAACCTCCC GCCCTTCCACAAGGCCAGCAGCTACCCCGCGGGGTGCCCGACGACGTACGACTACATCAT CGTCGGCGGCGGCACCGCGGGGTGCCCGCTGGCGGCGACGCTGTCGCACAGGTACAGGGT GCTGCTGCTGGAGCGCGGAGGCTCCCCGTACGGCGACCGCAACGTCTCCTACATGCAGAA CTTCCACATCGGGCTCATGAACATGGCGCCGGACTCGCCGTCGCAGGCCTTCATCTCCAC CGACGGCGTCATCAATGCCCGGGCGAGGGTGTTGGGCGGTGGGACCTGCATCAATGCCGG CTTCTACAGCCGGGCCAGCCCAAGCTTTATCCAGGAGGCCGGCTGGGATGAAGACCTGGT GAACAAATCATACCCTTGGGTAGAGGACAAGATTGTCCAGTGGCCTAAGATCGCGCCTTG GCAGGCGGCGCTACGGGATGGGCTGCTACAAGCAGGTGTAGCCCCCTTCAATGGGTACAC CTACGATCATGTCTCTGGAACAAAGGTGGGTGGCACCATCTTTGACGAGACTGGGTACCG CCACACAGCTGCCGACTTACTAGCAGCTGGAGATGCTAGCAACCTGAAGGTGCTGCTCCA CGCTAGTGTGCACAAGATAGTGTTTGGCTCGCGACAAGGACGACTGAAGGCAAGAGCCAT CGGAGTCGAATTCACTGATGAGGATGGGAGACACCACCAGGCATTCTTGAACAGCAACAG AGACAGTGAAGTAATTGTATCTGCTGGTGCGATCGGCACCCCCCAGCTGCTGCTGCTCAG TGGGATCGGGCCCAAGAACGACCTCAAGAATCATAACATTCCAGTGGTTCTCCATAACAG ATATGTGGGTAAAGGGATGGCTGACAACCCCATGAACTCCATATTCATACCAACAAGAAG CCCTCCTCGGCAGTCTCTCATTGAAACTGTTGGAATAACTGAAGAAGGCGTGTTCATTGA GGCCAGCAGCGGGTTTGGTCAGTCGTCGGAGAGTGTCCACTGCCACCATGGAATCATGTC TGCTGAGATTGGACAGCTGTCTACCATTCCTCCGAAGCAAAGAACCCTGGAAGCAGCCCA GAAATACGCCCATAACAAACTTAATCTGCCCAAAGAGGTATTCCACGGCGGTTTTATACT TGAAAAGATTGATGGTCCGATGTCCACAGGCCATCTGGTCCTCACAGACACTGATGTCCG GAACAATCCAGCAGTTACCTTCAACTACTTCAGTCATCCACAGGATCTCAATCGCTGTAT CTATGGTATCAAGACCATTGAAAGGATACTCAAGACAAACCGTTTCTCTGAACTCTCTGC TGATGGTGCTGGGTTATCGATGGAAAGGGTGCTCAATATGAGCGTGCAGGCTAATGTGAA CCTGATACCGAAGCATACAAATGACACAGAATCCCTGGAGCAGTTTTGCAAGGACACTGT GATCACCATCTGGCATTATCATGGTGGGTGCCATGTAGGGAAGGTGGTTGACCAGCATTA CCGGGTGCTTGGAGTTTCAGGTCTCCGGGTGGTTGACGGCTCAATATTTTCTAAATCGCC AGGGACCAACCCTCAAGCTACAGTTATGATGATGGGCAGATATATGGGAGTGAAGATCCT AAGGGAAAGGCTGGGACGAGCAGCTGGAGTGTAGTCGATTCCTGGACATTAGCTTTTTAT TATGTGTGGCCTAGGAAAGAAATTACTAATTTTTTGTGGGATCCAGAATGAATCGCTGAA GAAAAACAAGCCATGTGTTTCATCTGTACCCAGTAATCATTTGTCTAATATGATATCGCA GACTAAATGGTTGACTGAGCCCCTCTTTCTTCTTT