Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d020183_T012
CDS Infomation

cds chromosome:B73_RefGen_v4:7:98094023:98098750:-1 gene:Zm00001d020183 gene_biotype:protein_coding transcript_biotype:protein_coding description:Probable LRR receptor-like serine/threonine-protein kinase

Sequence

ATGATATTCCTGCACTTCACCGACTTCCAGGACACCCAGCTTCGACAGTTTGATATCCTC
ATCAACGAGAACCAATCTGGGCCGAAGCTCACGGCGTACAACGACACGTGGTACCTGACT
CCAACCCATGTGCACACCAAATCCTACAGGGCTGACGACGGCAAGTACAACGTCACTCTT
GCTGCAACCAAAGCCTCCGTGCTGCCTCCGATGATCAATGCGCTGGAGATCTACATTCGT
GTCCCTTATGAGAGTCCGACGACACTCCCTCAAGACTTTGACGCCATCGTGGCTATCAAA
ACTGAGTATGGACTCAGCAGAAACTGGATGGGTGATCCATGTTTTCCAATCAAATATGCT
TGGGACGGTGTGAAATGCAGCAACGCAAGTGGTAACACATCGAGGATAACATCACTAGAC
CTCTCCAACAGCTCTTTGCATGGCACAATTTCTAAGAACTTTACACTGCTCACAGCACTC
GAGAATTTGGATTTATCTTACAACAAGTTGATCGGATCAATACCTGATTCCCTGCCAAGT
TTGCCTTCCCTACGAGTTCTAAATGTATCTGGCAACCAGCTGAGTGACGAATCCCTATGC
CGTGATTTTGATGGCTCTGCATGCAACAAACCTTCCCCCAGCCCGTCAAGAAATAAAGTA
GCTATAATAGCTATTTCAGTAGTGGTTCCTGTGTTAGTACTAATTGTACTACTTTTTACA
TATTTCATCTGGTGGGCGAAAAGAAAGTCTAATGTGCAACCAGTACCCACACATGGCCCA
ACAAGAGATCCAGAACCTGATAATGTTTCAGGAAGCCAAAAAAGTTATGGCTACAACATG
AATAAAACTGAGAATCGTCAGTTCACATACAAAGAGCTGGAGAAGTTCACTAATAATTTC
AAGAAGTTCATAGGACAAGGAGGTTTTGGGCCTGTCTACTATGGCCGCTTGGAAGATGAT
ACTGAGGTTGCTGTCAAGATGCGTTCTGAATCATCGTCACATGGGCTTGATGAATTTTTA
GCTGAGGTTCAGAGCTTAACAAAGGTGCATCACAGGAATCTAGTGTCCTTGATTGGTTAC
TGCTGGGAAAAAGATCATTTGGCACTGGTTTATGAGTACATGTCTCAGGGCAGTCTTTTT
GATCATCTGAGAGGTAAAAATGGTGTTTCCCAAGCCTTGAATTGGAGGAAACGTGTGCAA
GTAGTGCTTGAAGCTGCACAAGGCCTGGATTATCTGCACAAGGGTTGCAGTTTGCCAATA
GTCCACCGTGATGTGAAGACCAACAACATTCTCCTGGGTCAAAATCTGCAAGCTAAAATA
GCAGATTTTGGACTTTCCAAGACATATTTGAGCGATACACAAACTCACATATCAGTCACT
CCAGCTGGCACAGCTGGTTACATGGACCCTGAGTACTACCTGACCGGAAGGCTCAGTGAG
AGCAGCGACGTGTACAGCTTCGGAGTTGTTCTGCTTGAGGTAGCCACAGGCGAGGCCCCG
ACAGTGCCAGGCCGAGGCCACGTCATTCAGCGCGTTAAACAGAAGGTTGCCACCGGCGAC
GTTGGCTCGATCGCTGATTCGCGACTTGGAAGCGCTTACGACATCAGCTCCATGTGGAAG
GTAATCGACACCGCTGTGATGTGCACCGCGGATTCTGCTGCTCAGAGGCCAACGATGGCC
ACAGTTGTGGTACAGCTGAAGGAGAGCCTGGCGTTGGAGGAAACTCGTGAGAAGGGCAGC
AGCAACAGGGTGAGCCGAGGGAGTGATATAGAAGCTATGGCGTCCACACTTGGTCCATTC
GCAAGATGA

Peptide Sequence

PEP ID

Zm00001d020183_P012
PEP Infomation

pep chromosome:B73_RefGen_v4:7:98094023:98098750:-1 gene:Zm00001d020183 transcript:Zm00001d020183_T012 gene_biotype:protein_coding transcript_biotype:protein_coding description:Probable LRR receptor-like serine/threonine-protein kinase

Sequence

MIFLHFTDFQDTQLRQFDILINENQSGPKLTAYNDTWYLTPTHVHTKSYRADDGKYNVTL
AATKASVLPPMINALEIYIRVPYESPTTLPQDFDAIVAIKTEYGLSRNWMGDPCFPIKYA
WDGVKCSNASGNTSRITSLDLSNSSLHGTISKNFTLLTALENLDLSYNKLIGSIPDSLPS
LPSLRVLNVSGNQLSDESLCRDFDGSACNKPSPSPSRNKVAIIAISVVVPVLVLIVLLFT
YFIWWAKRKSNVQPVPTHGPTRDPEPDNVSGSQKSYGYNMNKTENRQFTYKELEKFTNNF
KKFIGQGGFGPVYYGRLEDDTEVAVKMRSESSSHGLDEFLAEVQSLTKVHHRNLVSLIGY
CWEKDHLALVYEYMSQGSLFDHLRGKNGVSQALNWRKRVQVVLEAAQGLDYLHKGCSLPI
VHRDVKTNNILLGQNLQAKIADFGLSKTYLSDTQTHISVTPAGTAGYMDPEYYLTGRLSE
SSDVYSFGVVLLEVATGEAPTVPGRGHVIQRVKQKVATGDVGSIADSRLGSAYDISSMWK
VIDTAVMCTADSAAQRPTMATVVVQLKESLALEETREKGSSNRVSRGSDIEAMASTLGPF
AR

Transcript Sequence

Transcript ID

Zm00001d020183_T012
Transcript Infomation

cdna chromosome:B73_RefGen_v4:7:98094023:98098750:-1 gene:Zm00001d020183 gene_biotype:protein_coding transcript_biotype:protein_coding description:Probable LRR receptor-like serine/threonine-protein kinase

Sequence

GCGGCCCATTCAACCGGACACCAGCTCCTACGCCGTGCCCTCTCGCATCCTGCAGACAGC
CGTCGCCGCGGCATCGGACAACGATACGGCGGCGGCGCTCACCGCCGTGACCTGGCAGTA
CTAAACCAAGTACTCGTTCATGATATTCCTGCACTTCACCGACTTCCAGGACACCCAGCT
TCGACAGTTTGATATCCTCATCAACGAGAACCAATCTGGGCCGAAGCTCACGGCGTACAA
CGACACGTGGTACCTGACTCCAACCCATGTGCACACCAAATCCTACAGGGCTGACGACGG
CAAGTACAACGTCACTCTTGCTGCAACCAAAGCCTCCGTGCTGCCTCCGATGATCAATGC
GCTGGAGATCTACATTCGTGTCCCTTATGAGAGTCCGACGACACTCCCTCAAGACTTTGA
CGCCATCGTGGCTATCAAAACTGAGTATGGACTCAGCAGAAACTGGATGGGTGATCCATG
TTTTCCAATCAAATATGCTTGGGACGGTGTGAAATGCAGCAACGCAAGTGGTAACACATC
GAGGATAACATCACTAGACCTCTCCAACAGCTCTTTGCATGGCACAATTTCTAAGAACTT
TACACTGCTCACAGCACTCGAGAATTTGGATTTATCTTACAACAAGTTGATCGGATCAAT
ACCTGATTCCCTGCCAAGTTTGCCTTCCCTACGAGTTCTAAATGTATCTGGCAACCAGCT
GAGTGACGAATCCCTATGCCGTGATTTTGATGGCTCTGCATGCAACAAACCTTCCCCCAG
CCCGTCAAGAAATAAAGTAGCTATAATAGCTATTTCAGTAGTGGTTCCTGTGTTAGTACT
AATTGTACTACTTTTTACATATTTCATCTGGTGGGCGAAAAGAAAGTCTAATGTGCAACC
AGTACCCACACATGGCCCAACAAGAGATCCAGAACCTGATAATGTTTCAGGAAGCCAAAA
AAGTTATGGCTACAACATGAATAAAACTGAGAATCGTCAGTTCACATACAAAGAGCTGGA
GAAGTTCACTAATAATTTCAAGAAGTTCATAGGACAAGGAGGTTTTGGGCCTGTCTACTA
TGGCCGCTTGGAAGATGATACTGAGGTTGCTGTCAAGATGCGTTCTGAATCATCGTCACA
TGGGCTTGATGAATTTTTAGCTGAGGTTCAGAGCTTAACAAAGGTGCATCACAGGAATCT
AGTGTCCTTGATTGGTTACTGCTGGGAAAAAGATCATTTGGCACTGGTTTATGAGTACAT
GTCTCAGGGCAGTCTTTTTGATCATCTGAGAGGTAAAAATGGTGTTTCCCAAGCCTTGAA
TTGGAGGAAACGTGTGCAAGTAGTGCTTGAAGCTGCACAAGGCCTGGATTATCTGCACAA
GGGTTGCAGTTTGCCAATAGTCCACCGTGATGTGAAGACCAACAACATTCTCCTGGGTCA
AAATCTGCAAGCTAAAATAGCAGATTTTGGACTTTCCAAGACATATTTGAGCGATACACA
AACTCACATATCAGTCACTCCAGCTGGCACAGCTGGTTACATGGACCCTGAGTACTACCT
GACCGGAAGGCTCAGTGAGAGCAGCGACGTGTACAGCTTCGGAGTTGTTCTGCTTGAGGT
AGCCACAGGCGAGGCCCCGACAGTGCCAGGCCGAGGCCACGTCATTCAGCGCGTTAAACA
GAAGGTTGCCACCGGCGACGTTGGCTCGATCGCTGATTCGCGACTTGGAAGCGCTTACGA
CATCAGCTCCATGTGGAAGGTAATCGACACCGCTGTGATGTGCACCGCGGATTCTGCTGC
TCAGAGGCCAACGATGGCCACAGTTGTGGTACAGCTGAAGGAGAGCCTGGCGTTGGAGGA
AACTCGTGAGAAGGGCAGCAGCAACAGGGTGAGCCGAGGGAGTGATATAGAAGCTATGGC
GTCCACACTTGGTCCATTCGCAAGATGAAGCTATGCCTGTACCTGGATTCAGTTCATGGT
TGACGTCCCTACTAAAACTGTGTATGGTCACCTAAAATAATATTTTGCACTGTAAAATGT
ATTATTTGCAGAGTGAAGTTTTAATATGGATATGAGAATAGG