Plant GARDEN
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d020178_T007
CDS Infomation

cds chromosome:B73_RefGen_v4:7:97692330:97700283:-1 gene:Zm00001d020178 gene_biotype:protein_coding transcript_biotype:protein_coding description:Retinol dehydrogenase 13
Sequence

ATGGCTCGCCTGTTCCGCGAGTCTCGCCGCGACTCGTCCCACTCCTCCTCGTCCAACGGC
TTCCTCCCTCCGGCGGCGGCTTCCAGCCCCTCTTCCGCCTCCGCGATCCCCTCGCCATTC
CCGGACCTCGGGGTCGCCCTCTCCGCCGCAGACCTCCGGGAGGCCGCCTACGAGGTGCTG
GTCGCGGCCTCCCGCACCACGGGCGGGAAGCCCCTCACCTATATCCCCCAGTCCTCGTCG
GTGGCCACGGGGCCGCCGGTGTCCCCGGCCTCCTCCGCGTCCTCGGCCTCATCCGCCTCG
CTCCAGCGCTCCCTCACCTCTGCCGCCGCCAGCAAGATGAAGAAGGCGCTCGGGCTCCGG
TCCTCCGCCTCCTCCAAGGGTGTCGGCAGCCCCGGGAGTGGCGGGAAGGCGGCGCCCCCG
CGGAGGCCCGCCACGGTTGGGGAGCTCATGCGGGTGCAGATGCGCATCTCCGAGCCCGCC
GACGCCAGGATCCGCAGGGGGCTCCTCCGCATCGCCGCCAGCCAGCTTGGCAGACGCGCA
GAATCTATGGTCTTGCCCTTGGAATTCTTGCAGCAATTCAAGGCATCAGATTTCCCTGAT
CCTCAAGAGTATGAGGCGTGGCGGAGTAGGAATCTGAAGCTTCTTGAGGCTGGTCTACTT
GTTCATCCACTCATTCCATTGAACAAATCAGACAGTTCTGGTCAACGGTTGCGGCAAATT
ATACGGGGTGCATATGATAGGCCACTTGAAACTGGGAAAAACTCTGAGTCAATGCAGGGC
CTACGTACTTCTGTCATGTCCCTTGCTGGAAGATCTCATGATGGAACTTCTGATGGATGC
CACTGGGCAGATGGCTTCCCCTTGAATCTCCATCTGTACCAAGTTTTGGTAGAAGCTTGC
TTTGATAATGACGAGGGCACTGTGGTCGATGAGATCGATGAGGTGATGGAGCTTTTGAAG
AAAACCTGGGTTATTCTTGGAATTAATGAGTTACTCCACAATCTTTGCTTTACTTGGGCA
TTGTTCAACCATTTTGTTATGTCTGGTCAAGTAGATATTGAGCTGCTTTCTGCGGCAGAG
AACCAGTTAGCTGAAGTAGCTAAGGATGCCAAGAGCACAAAAGATCCAAATTACTGTAAA
GTATTGAGTTCAACATTAAGCTCAATAATGGGCTGGACAGAGAAAAGACTTCTGGCATAT
CATGAAACCTTCAATACATGTAATATTGAGTCTATGCAAGGCATTGTCTCCATTGGAGTG
TCAGCTGCAAGAATCCTTGTTGAAGATATATCTCAGGAATACCGCCGTAGAAGAAAAGAA
GAGACTGATGTAGCTCGAAGCAGGGTAGAGACATACATAAGGTCTTCACTAAGGACAGCT
TTTGCTCAAAGAATGGAAGAAGCAGATTCAAAACGGTCATCAAGAAACCCTACTCCAGTT
CTTTCTATCCTTGCGAAGGACATTGGTGACCTAGCTACAAAGGAGAAAAATATCTACAGT
CCAATACTGAAGACATGGCATCCACTCGCTTCAGGTGTTGCCGTTGCAACCCTTCATTCT
TGTTATGGAAATGAGCTGAAGCAGTTTGTAGCTGGGCTTACAGAGCTGACCCCTGATACA
GTTCAAGTACTTAAATCGGCAGATAAATTAGAGAAGGACCTTGTTAATATCGCTGTAGAA
GATTCTGTGGATAGTGATGATGGAGGCAAGTCACTTATCAGAGAGATGCCGCCATATGAA
GCTGAAAATGCAATTGCTAATCTGGTGAAAGTGTGGATAAAAGATAGAGTAGACAGACTC
AAGGGATGGGTTGACCGGAATTTGAAGCAAGAGGTGCTCATTTTCCCCCTTTCACCATGA

Peptide Sequence

PEP ID

Zm00001d020178_P007
PEP Infomation

pep chromosome:B73_RefGen_v4:7:97692330:97700283:-1 gene:Zm00001d020178 transcript:Zm00001d020178_T007 gene_biotype:protein_coding transcript_biotype:protein_coding description:Retinol dehydrogenase 13
Sequence

MARLFRESRRDSSHSSSSNGFLPPAAASSPSSASAIPSPFPDLGVALSAADLREAAYEVL
VAASRTTGGKPLTYIPQSSSVATGPPVSPASSASSASSASLQRSLTSAAASKMKKALGLR
SSASSKGVGSPGSGGKAAPPRRPATVGELMRVQMRISEPADARIRRGLLRIAASQLGRRA
ESMVLPLEFLQQFKASDFPDPQEYEAWRSRNLKLLEAGLLVHPLIPLNKSDSSGQRLRQI
IRGAYDRPLETGKNSESMQGLRTSVMSLAGRSHDGTSDGCHWADGFPLNLHLYQVLVEAC
FDNDEGTVVDEIDEVMELLKKTWVILGINELLHNLCFTWALFNHFVMSGQVDIELLSAAE
NQLAEVAKDAKSTKDPNYCKVLSSTLSSIMGWTEKRLLAYHETFNTCNIESMQGIVSIGV
SAARILVEDISQEYRRRRKEETDVARSRVETYIRSSLRTAFAQRMEEADSKRSSRNPTPV
LSILAKDIGDLATKEKNIYSPILKTWHPLASGVAVATLHSCYGNELKQFVAGLTELTPDT
VQVLKSADKLEKDLVNIAVEDSVDSDDGGKSLIREMPPYEAENAIANLVKVWIKDRVDRL
KGWVDRNLKQEVLIFPLSP

Transcript Sequence

Transcript ID

Zm00001d020178_T007
Transcript Infomation

cdna chromosome:B73_RefGen_v4:7:97692330:97700283:-1 gene:Zm00001d020178 gene_biotype:protein_coding transcript_biotype:protein_coding description:Retinol dehydrogenase 13
Sequence

TTCTCTCTCCTCTCTCCGGACCGGAGCCTACTCTCTCCACTAGAGAGCGCGGGACCTAGC
ACGAGTAGAGGGAGAAGTTGAGGGGGAGGTCCCGCCGCGAGGTCACCGTCGTCGCCGCCG
CCGCTGCGATGGCTCGCCTGTTCCGCGAGTCTCGCCGCGACTCGTCCCACTCCTCCTCGT
CCAACGGCTTCCTCCCTCCGGCGGCGGCTTCCAGCCCCTCTTCCGCCTCCGCGATCCCCT
CGCCATTCCCGGACCTCGGGGTCGCCCTCTCCGCCGCAGACCTCCGGGAGGCCGCCTACG
AGGTGCTGGTCGCGGCCTCCCGCACCACGGGCGGGAAGCCCCTCACCTATATCCCCCAGT
CCTCGTCGGTGGCCACGGGGCCGCCGGTGTCCCCGGCCTCCTCCGCGTCCTCGGCCTCAT
CCGCCTCGCTCCAGCGCTCCCTCACCTCTGCCGCCGCCAGCAAGATGAAGAAGGCGCTCG
GGCTCCGGTCCTCCGCCTCCTCCAAGGGTGTCGGCAGCCCCGGGAGTGGCGGGAAGGCGG
CGCCCCCGCGGAGGCCCGCCACGGTTGGGGAGCTCATGCGGGTGCAGATGCGCATCTCCG
AGCCCGCCGACGCCAGGATCCGCAGGGGGCTCCTCCGCATCGCCGCCAGCCAGCTTGGCA
GACGCGCAGAATCTATGGTCTTGCCCTTGGAATTCTTGCAGCAATTCAAGGCATCAGATT
TCCCTGATCCTCAAGAGTATGAGGCGTGGCGGAGTAGGAATCTGAAGCTTCTTGAGGCTG
GTCTACTTGTTCATCCACTCATTCCATTGAACAAATCAGACAGTTCTGGTCAACGGTTGC
GGCAAATTATACGGGGTGCATATGATAGGCCACTTGAAACTGGGAAAAACTCTGAGTCAA
TGCAGGGCCTACGTACTTCTGTCATGTCCCTTGCTGGAAGATCTCATGATGGAACTTCTG
ATGGATGCCACTGGGCAGATGGCTTCCCCTTGAATCTCCATCTGTACCAAGTTTTGGTAG
AAGCTTGCTTTGATAATGACGAGGGCACTGTGGTCGATGAGATCGATGAGGTGATGGAGC
TTTTGAAGAAAACCTGGGTTATTCTTGGAATTAATGAGTTACTCCACAATCTTTGCTTTA
CTTGGGCATTGTTCAACCATTTTGTTATGTCTGGTCAAGTAGATATTGAGCTGCTTTCTG
CGGCAGAGAACCAGTTAGCTGAAGTAGCTAAGGATGCCAAGAGCACAAAAGATCCAAATT
ACTGTAAAGTATTGAGTTCAACATTAAGCTCAATAATGGGCTGGACAGAGAAAAGACTTC
TGGCATATCATGAAACCTTCAATACATGTAATATTGAGTCTATGCAAGGCATTGTCTCCA
TTGGAGTGTCAGCTGCAAGAATCCTTGTTGAAGATATATCTCAGGAATACCGCCGTAGAA
GAAAAGAAGAGACTGATGTAGCTCGAAGCAGGGTAGAGACATACATAAGGTCTTCACTAA
GGACAGCTTTTGCTCAAAGAATGGAAGAAGCAGATTCAAAACGGTCATCAAGAAACCCTA
CTCCAGTTCTTTCTATCCTTGCGAAGGACATTGGTGACCTAGCTACAAAGGAGAAAAATA
TCTACAGTCCAATACTGAAGACATGGCATCCACTCGCTTCAGGTGTTGCCGTTGCAACCC
TTCATTCTTGTTATGGAAATGAGCTGAAGCAGTTTGTAGCTGGGCTTACAGAGCTGACCC
CTGATACAGTTCAAGTACTTAAATCGGCAGATAAATTAGAGAAGGACCTTGTTAATATCG
CTGTAGAAGATTCTGTGGATAGTGATGATGGAGGCAAGTCACTTATCAGAGAGATGCCGC
CATATGAAGCTGAAAATGCAATTGCTAATCTGGTGAAAGTGTGGATAAAAGATAGAGTAG
ACAGACTCAAGGGATGGGTTGACCGGAATTTGAAGCAAGAGGTGCTCATTTTCCCCCTTT
CACCATGAGACCTTAATTTCTTGATATAAGTAGATAGTCATAATTCAGTAACTAATTTCG
TGTGCTGTTGTACTTTAATTTTTCAATCCGTTTTCTGTATATATATCTGATCATCTTAAA
CGTGTTGTAGTAGCATTGTATTATATACATACTTACTAAAGTGGACCATTTTTTTTTCAT
CTACAGTATCGATAATCATT