Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d020170_T002
CDS Infomation

cds chromosome:B73_RefGen_v4:7:97038509:97042833:1 gene:Zm00001d020170 gene_biotype:protein_coding transcript_biotype:protein_coding description:Sulfite exporter TauE/SafE family protein
Sequence

ATGATTATGGGAGCCTCTGTTTCAACTGTTTACTACAATCTCAAGCTAAAGCATCCGACT
TTGGACATGCCAGTGATCGATTATGACCTGGCTGTGCTCATGCAGCCTATGCTAATGCTT
GGGATCAGCATTGGTGTTATTTTTAATGTTATATTCCCTGACTGGCTGGTCACAGTTCTG
CTGATAATTCTTTTCCTAGGCACATCCACAAAAGCCTTTCTGAAGGGCATTGAGACATGG
AAGAAAGAGACAGTAATCCAAAGGGAGGCTGCGAAACTTTTGGAGCAAACTGCAGGTGAG
GAAGCAGAGTATGCAGCACTTCCTACTGGACCAGATGTTGCAGCAAACAAAAAAGCCCTC
ACATCAGATGAGGCGCCATCGCTTATAAAGAACATACACTGGAAGAAGGTTGGTCTTCTT
TCATTTGTATGGGTGGCATTCCTTGTTCTTCAGGTCACAAAGAATTACACTGCTACTTGC
TCCCCATGGTACTGGGTCTTGAACCTTCTCCAGGTTCCAGTGTCAGTAGGAGTGACACTG
TATGAAGGATTTGGGCTGATGAGTGGGAAGAGGGTGTTATCATCAAAGGGAAGTGGACAA
ACTACCATGAAATTTCATCAGGTAGTCGTATACGGTCTATTCGGTATAGCCGCAGGACTA
GTTGGTGGACTCCTTGGTCTCGGAGGTGGCTTCATTATGGGGCCACTGTTCTTGGAGCTT
GGCATCCCTCCCCAAGTTTCAAGTGCTACTGCTACCTTTGCAATGATGTTCTCATCTTCC
ATGTCGGTTGTCGAATACTACCTCTTGAACCGGTTTCCAGTGCCTTATGCTGTTTATTTC
ATCGTTGTTGCATTTGTTGCTGCCATCATTGGCCAGCATGTGGTGAGGAAGTTGATCAAC
TGGCTAGGGCGAGCATCACTTATCATCTTCATACTGGCTTTCATGATCTTTGTCAGCGCG
ATTTCTCTCGGTGGGGTTGGCGTCTCTAACATGGTTCACAAGATTGAGCGACATGAGTAC
ATGGGGTTTGAGGACCTTTGCAAGTACGATGCATAA

Peptide Sequence

PEP ID

Zm00001d020170_P002
PEP Infomation

pep chromosome:B73_RefGen_v4:7:97038509:97042833:1 gene:Zm00001d020170 transcript:Zm00001d020170_T002 gene_biotype:protein_coding transcript_biotype:protein_coding description:Sulfite exporter TauE/SafE family protein
Sequence

MIMGASVSTVYYNLKLKHPTLDMPVIDYDLAVLMQPMLMLGISIGVIFNVIFPDWLVTVL
LIILFLGTSTKAFLKGIETWKKETVIQREAAKLLEQTAGEEAEYAALPTGPDVAANKKAL
TSDEAPSLIKNIHWKKVGLLSFVWVAFLVLQVTKNYTATCSPWYWVLNLLQVPVSVGVTL
YEGFGLMSGKRVLSSKGSGQTTMKFHQVVVYGLFGIAAGLVGGLLGLGGGFIMGPLFLEL
GIPPQVSSATATFAMMFSSSMSVVEYYLLNRFPVPYAVYFIVVAFVAAIIGQHVVRKLIN
WLGRASLIIFILAFMIFVSAISLGGVGVSNMVHKIERHEYMGFEDLCKYDA

Transcript Sequence

Transcript ID

Zm00001d020170_T002
Transcript Infomation

cdna chromosome:B73_RefGen_v4:7:97038509:97042833:1 gene:Zm00001d020170 gene_biotype:protein_coding transcript_biotype:protein_coding description:Sulfite exporter TauE/SafE family protein
Sequence

AGAGCGCCCCTCTTCTAAATTTGGCACGGAGCTCTCGTCGCCTTCCCGTCTTTCAGAATT
CAGAGGGCCGCACACGTTCCCTGCCGCTGCCTCTACCCCTCTCCGGGCTCTCCCTCCCCC
TCTCCACCGTCTCTACACCGCCGCCGCTCACACCCCAATTCCTCTCGCCCCATTGCCGGC
CGCCTCCCTCCGTCCTCTCGCCTCGCTTGCTGCAGGTTCAATCGCCGCCGCCATTTCTGC
AGTTTTTAATTCCCACGTCCTGTTCCGGCCCGGCCGTGCACTCCAAATTCTTCCAACAAG
GCCAGCCCACGCCACCCGGCCGGGATCCCAGAAAAGTTGCGCTCGGCCTTCGCGCGTTAC
GTCTCCCACCCAGCCCTTCGATCCCGTGATTTCAGAGGCGCCCCTGTACCGAAAGCCTAG
CTCCCAATCTTCCTTGGATTCGTCTTTTTTTTGGATCTTGGGGACTGCACTGCACACAGT
TTGCCTCTCTTACCTTTTTTTGGATCTTGGTGGTGCCGAGCCGACAAGCAATGGGGAGGA
AGTACTACTGCCACGCCGTGGCCGCGCTGGCCGTCGTGTTCGCGGCGGCCGTCGTCGTCG
CTGCCGACCGGCGCCTGTCGCTGGTGGTCGGCGCCGCGGTGGCGCCCGAGGAGGTGAGTC
TGCTCCGGAAGGTGGCCAATCTGATGTGGAACGGCGATGGCAACTCGTACCAGCACGTGT
GGCCGGTATGATTATGGGAGCCTCTGTTTCAACTGTTTACTACAATCTCAAGCTAAAGCA
TCCGACTTTGGACATGCCAGTGATCGATTATGACCTGGCTGTGCTCATGCAGCCTATGCT
AATGCTTGGGATCAGCATTGGTGTTATTTTTAATGTTATATTCCCTGACTGGCTGGTCAC
AGTTCTGCTGATAATTCTTTTCCTAGGCACATCCACAAAAGCCTTTCTGAAGGGCATTGA
GACATGGAAGAAAGAGACAGTAATCCAAAGGGAGGCTGCGAAACTTTTGGAGCAAACTGC
AGGTGAGGAAGCAGAGTATGCAGCACTTCCTACTGGACCAGATGTTGCAGCAAACAAAAA
AGCCCTCACATCAGATGAGGCGCCATCGCTTATAAAGAACATACACTGGAAGAAGGTTGG
TCTTCTTTCATTTGTATGGGTGGCATTCCTTGTTCTTCAGGTCACAAAGAATTACACTGC
TACTTGCTCCCCATGGTACTGGGTCTTGAACCTTCTCCAGGTTCCAGTGTCAGTAGGAGT
GACACTGTATGAAGGATTTGGGCTGATGAGTGGGAAGAGGGTGTTATCATCAAAGGGAAG
TGGACAAACTACCATGAAATTTCATCAGGTAGTCGTATACGGTCTATTCGGTATAGCCGC
AGGACTAGTTGGTGGACTCCTTGGTCTCGGAGGTGGCTTCATTATGGGGCCACTGTTCTT
GGAGCTTGGCATCCCTCCCCAAGTTTCAAGTGCTACTGCTACCTTTGCAATGATGTTCTC
ATCTTCCATGTCGGTTGTCGAATACTACCTCTTGAACCGGTTTCCAGTGCCTTATGCTGT
TTATTTCATCGTTGTTGCATTTGTTGCTGCCATCATTGGCCAGCATGTGGTGAGGAAGTT
GATCAACTGGCTAGGGCGAGCATCACTTATCATCTTCATACTGGCTTTCATGATCTTTGT
CAGCGCGATTTCTCTCGGTGGGGTTGGCGTCTCTAACATGGTTCACAAGATTGAGCGACA
TGAGTACATGGGGTTTGAGGACCTTTGCAAGTACGATGCATAAGAAGCAGGGAAGCTGAA
GATGTGAGCTATGTGGTGTGCAGTTCTCCGCAAGCAGAAGTGGGATAATTCAAGGATAGA
AGGGTTCCATGATGCAATTTGGTGCGTAGGACCGAAGAGGTTCTAGCAGCGACAGTTCCT
CGAAGGGAGGCTAGCTGCATGGATTGGCTTAAGATGAATTTTGGGCACTGAATTTTCAAA
ACAAATGTAGAGATGATTTTCTGCCACGGCAGAATGTCGTCAGTGCATTTCGTTGTAGGA
AATGTACACTGCACATCTTCAGATAACCATCCTATAGTACTACGCGATATGAAATATCAC
ATGATAGAC