Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d020122_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:7:94287204:94289243:1 gene:Zm00001d020122 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:BURP domain-containing protein-RD22-like7 description:Polygalacturonase 1 beta-like protein 3
Sequence	ATGGCGTTCACTGGCTGCGCTCATCTCCTCCTCACCATGTCCATTCTGCTGCTACTCTGT CATCGGAGGACACGTGCATTCCCACTACCATCACCTTCTGCATCGTCAAGCGCCGCCTCC CCGTCGCCTCCTCCGGTGCCGGCGCTACCGCGAGGCCTACCACGGCTCATACCGGTGTGG ACGTCGCTGCCCGTGAATCCGTTCACGGCGAAGGCGGCATTTATCCGGTACTGGAACCGG AAGGTGAGCAGCAACCGCCCGCACCCGGCCTTCCTCTTCGCCAAGCTGTCGCCGCTCTCG GCCCCGGACGCGGCCACGTTCTCCAACCTGGCCTCCGCAGGCAAGCTCGCCTCCCGCATC CACGACTTCTGCGACGCGGCGTCCCTGCTCTGTCCATCGACCCCCGCGGCGTCCTGGTCG GCGTCGTCCACGTCCATGGACGGCGCCGCGGGCGTGGCCTCCTCCGGCGGTGGCAGTGGC GCTGCCTCCGCCGCGCCGTTCAAGGACTACGAGAACGGAAACTTCAGCAGCTACGGCAAC AGCGGCGGCGGCGGCTCTGACCAGTTCGCGATCTACTCGAGCGGGAAGAGCGGACCCGTT GACTCGTTCAAGCGGTACGGCAAGGGCTCGCTCGGCCGGAACGACTCCTTTGCGAACTAC GAGGAGGGGGCAAACGTCGGCACGTCCACCTTCAACTCGTACACCACCGGAGCCACCGGC GGCGCCGGGGAGTTCGCCGGGTACGCTGGACAGACGAACACGGTGGCAGTGGCCTTCGCC ACCTACGACAGCGTCGGCAATGGCCGGACGCACGAGTTCACGGCGTACTCGCAGGACGCC AACTCCGGCGTTCAGAGCTTCACCGGCTACGGCAAGACCGCGAACGGCGCAGGTGAGTCC TTCGAAACCTACGGGAACAACTCCAACACCGTTGCGTCCGGCTTCATCAACTACGGCGAG AAGTCCAACGGCTTCAACGACACGTTCACCTCCTATGGCCTTGTCGGGAACGCGCCCGAG AACACGTTCCGGAGCTACGCCTCCGGCAGCAACGCCGGCGTCGACCAGTTCAAGGCGTAC AGGGACGAAGCCAACGTCGGCGACGACAGCTTCATGTCCTACGCGAACAACGCCAATGGC GCCGCCGCCGACTTCGACAGCTACGGCAAGTCGACCAACCCCGGGAGCGTGGCGTTCAAG GGGTACGGCCAGGGCTCCAACCCCAACCACCGCATCGGCTTCAAGCACTACGCCGGCGAA AACACGACGTTCAAGGCGTACTCAAACGAAGGCGTCGAGTTCAAGGAGTACCAGAACATG TCAAAGATGGAGGTGTCAAAGGCGGCCGCAGCGGCGCCTGGGCGCCGGCTGCCCGCGTGG TCGCCGGAGCCGGGGAAGTTCTTCCGTGAGCGAGATCTCATGATGGGCAACCGAATGCCG ATGCCGGACATCGCCGACAAGATGCCGCGCCGCGCGTTCCTGCCGAGGGACATTGCCACC AAGATACCGTTCGAGGAGAACGCCGTGTCGGCACTGTTCGGAGCGCCACCGGGCACGGCA ATGAGGCAGGTGGTGGCGTCGACGGTGGCCGAGTGCGCGCGACCGCCCAGCCCGGGGGAG ACGAAGCGGTGCACGACGTCGGCCGAGGACATGCTGGACTTCGCGGTGGAGATGCTGGGC AGCAACATCGCGGTTCGCAGCACGGAGTCCACGGCAGGCAGCGGTAGGGACGTCCGGCTC GGGAAGATCACGGGCATCGCCGGCGGCAGCGTGACGCGGTCCGTGTCGTGCCATCAGAGC CTGTTCCCGTACCTGGTGTACTACTGCCACTCGGTGCCACGGGTCCGGCTGTACGAGGCG GACATCCTGGACGTGGACTCCAACCGTAAGATCAATCATGGCGTGGCCATCTGCCATCTC GAGACGTCGGACTGGAGCCCCAATCACGGGGCATTCGTAGCGCTCGGAGGAAAACCTGGT CAGATTGAGGTCTGCCACTGGATCTTCGAGGGAGACATGGCTTGGACCCTTGTTGATTGA

Peptide Sequence

PEP ID	Zm00001d020122_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:7:94287204:94289243:1 gene:Zm00001d020122 transcript:Zm00001d020122_T001 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:BURP domain-containing protein-RD22-like7 description:Polygalacturonase 1 beta-like protein 3
Sequence	MAFTGCAHLLLTMSILLLLCHRRTRAFPLPSPSASSSAASPSPPPVPALPRGLPRLIPVW TSLPVNPFTAKAAFIRYWNRKVSSNRPHPAFLFAKLSPLSAPDAATFSNLASAGKLASRI HDFCDAASLLCPSTPAASWSASSTSMDGAAGVASSGGGSGAASAAPFKDYENGNFSSYGN SGGGGSDQFAIYSSGKSGPVDSFKRYGKGSLGRNDSFANYEEGANVGTSTFNSYTTGATG GAGEFAGYAGQTNTVAVAFATYDSVGNGRTHEFTAYSQDANSGVQSFTGYGKTANGAGES FETYGNNSNTVASGFINYGEKSNGFNDTFTSYGLVGNAPENTFRSYASGSNAGVDQFKAY RDEANVGDDSFMSYANNANGAAADFDSYGKSTNPGSVAFKGYGQGSNPNHRIGFKHYAGE NTTFKAYSNEGVEFKEYQNMSKMEVSKAAAAAPGRRLPAWSPEPGKFFRERDLMMGNRMP MPDIADKMPRRAFLPRDIATKIPFEENAVSALFGAPPGTAMRQVVASTVAECARPPSPGE TKRCTTSAEDMLDFAVEMLGSNIAVRSTESTAGSGRDVRLGKITGIAGGSVTRSVSCHQS LFPYLVYYCHSVPRVRLYEADILDVDSNRKINHGVAICHLETSDWSPNHGAFVALGGKPG QIEVCHWIFEGDMAWTLVD

Transcript Sequence

Transcript ID	Zm00001d020122_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:7:94287204:94289243:1 gene:Zm00001d020122 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:BURP domain-containing protein-RD22-like7 description:Polygalacturonase 1 beta-like protein 3
Sequence	ATGGCGTTCACTGGCTGCGCTCATCTCCTCCTCACCATGTCCATTCTGCTGCTACTCTGT CATCGGAGGACACGTGCATTCCCACTACCATCACCTTCTGCATCGTCAAGCGCCGCCTCC CCGTCGCCTCCTCCGGTGCCGGCGCTACCGCGAGGCCTACCACGGCTCATACCGGTGTGG ACGTCGCTGCCCGTGAATCCGTTCACGGCGAAGGCGGCATTTATCCGGTACTGGAACCGG AAGGTGAGCAGCAACCGCCCGCACCCGGCCTTCCTCTTCGCCAAGCTGTCGCCGCTCTCG GCCCCGGACGCGGCCACGTTCTCCAACCTGGCCTCCGCAGGCAAGCTCGCCTCCCGCATC CACGACTTCTGCGACGCGGCGTCCCTGCTCTGTCCATCGACCCCCGCGGCGTCCTGGTCG GCGTCGTCCACGTCCATGGACGGCGCCGCGGGCGTGGCCTCCTCCGGCGGTGGCAGTGGC GCTGCCTCCGCCGCGCCGTTCAAGGACTACGAGAACGGAAACTTCAGCAGCTACGGCAAC AGCGGCGGCGGCGGCTCTGACCAGTTCGCGATCTACTCGAGCGGGAAGAGCGGACCCGTT GACTCGTTCAAGCGGTACGGCAAGGGCTCGCTCGGCCGGAACGACTCCTTTGCGAACTAC GAGGAGGGGGCAAACGTCGGCACGTCCACCTTCAACTCGTACACCACCGGAGCCACCGGC GGCGCCGGGGAGTTCGCCGGGTACGCTGGACAGACGAACACGGTGGCAGTGGCCTTCGCC ACCTACGACAGCGTCGGCAATGGCCGGACGCACGAGTTCACGGCGTACTCGCAGGACGCC AACTCCGGCGTTCAGAGCTTCACCGGCTACGGCAAGACCGCGAACGGCGCAGGTGAGTCC TTCGAAACCTACGGGAACAACTCCAACACCGTTGCGTCCGGCTTCATCAACTACGGCGAG AAGTCCAACGGCTTCAACGACACGTTCACCTCCTATGGCCTTGTCGGGAACGCGCCCGAG AACACGTTCCGGAGCTACGCCTCCGGCAGCAACGCCGGCGTCGACCAGTTCAAGGCGTAC AGGGACGAAGCCAACGTCGGCGACGACAGCTTCATGTCCTACGCGAACAACGCCAATGGC GCCGCCGCCGACTTCGACAGCTACGGCAAGTCGACCAACCCCGGGAGCGTGGCGTTCAAG GGGTACGGCCAGGGCTCCAACCCCAACCACCGCATCGGCTTCAAGCACTACGCCGGCGAA AACACGACGTTCAAGGCGTACTCAAACGAAGGCGTCGAGTTCAAGGAGTACCAGAACATG TCAAAGATGGAGGTGTCAAAGGCGGCCGCAGCGGCGCCTGGGCGCCGGCTGCCCGCGTGG TCGCCGGAGCCGGGGAAGTTCTTCCGTGAGCGAGATCTCATGATGGGCAACCGAATGCCG ATGCCGGACATCGCCGACAAGATGCCGCGCCGCGCGTTCCTGCCGAGGGACATTGCCACC AAGATACCGTTCGAGGAGAACGCCGTGTCGGCACTGTTCGGAGCGCCACCGGGCACGGCA ATGAGGCAGGTGGTGGCGTCGACGGTGGCCGAGTGCGCGCGACCGCCCAGCCCGGGGGAG ACGAAGCGGTGCACGACGTCGGCCGAGGACATGCTGGACTTCGCGGTGGAGATGCTGGGC AGCAACATCGCGGTTCGCAGCACGGAGTCCACGGCAGGCAGCGGTAGGGACGTCCGGCTC GGGAAGATCACGGGCATCGCCGGCGGCAGCGTGACGCGGTCCGTGTCGTGCCATCAGAGC CTGTTCCCGTACCTGGTGTACTACTGCCACTCGGTGCCACGGGTCCGGCTGTACGAGGCG GACATCCTGGACGTGGACTCCAACCGTAAGATCAATCATGGCGTGGCCATCTGCCATCTC GAGACGTCGGACTGGAGCCCCAATCACGGGGCATTCGTAGCGCTCGGAGGAAAACCTGGT CAGATTGAGGTCTGCCACTGGATCTTCGAGGGAGACATGGCTTGGACCCTTGTTGATTGA