Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d020097_T008
CDS Infomation

cds chromosome:B73_RefGen_v4:7:91751351:91756938:-1 gene:Zm00001d020097 gene_biotype:protein_coding transcript_biotype:protein_coding description:RING/U-box superfamily protein
Sequence

ATGGCGCACACTTCCTGTGATGGTGTACATCATGTTATAAGTGTAGCACATGGGGAAACT
GCATCAACATCAACCAGTCATCAAGATATGTGCAGTGACTCGGATGAACCACATCAGGAA
GATAGGCTATCAACAAGCACACAAACCCTGTCATCAGAGTCTTCGCCATCAATATCACCA
ACTGCTTATAGCACCAGAAATTTATCTTTTCCTAGAAGAGATAGTATATATGGTCATGGA
AGAAGTCCATGGAATTCTGGTTTATGGATCTCGTTTGAAATTGTCATGTACATTGCTCAG
GTTGTAGCTGCTATTGTCATCCTCATCTTTTCAAGACATGAACATCCCCATGCTCCTTTG
TTCGCATGGATAATTGGATATACACTTGGCTGCATTGCTAGTCTTCCTCTTATTTATTGG
CGGTATGTTCATCGAAACAGACATTTGGATCAAGAACCTCAGCAGCCACCTACAACATAT
CCTACTTTGACTCCTTCTCAGTCATCAGAAGGACGCAACCATCGTACCAGTGGTATTGTT
TTGCATCTTGGATGTATCTCAATTTCTTGCCCAAGGCTTAGTGTGCTGGCTTATCACTTC
AAGACAGGTGTTGACTGTTTCTTTGCTGTATGGTTTGTTGTTGGCAATGTGTGGATTTTT
GGTGGGCGCAGTATTTCATCAGATGCTCAGGACGCTCCCAATATGTACAGGTTGTGTTTG
GCATTCCTTGCGCTTAGTTGTGTTGGATATGCCATTCCTTTTATAATGTGTGCAGCAATA
TGCTGCTGCTTTCCATGCTTGATTTCTGTTTTGCGTCTTCAAGAAGATTTGGGTCAAAAT
AGAGGAGCTACTCAAGAGCTAATAGATGCATTGCCAACCTACAAATTCAAACCAAAACGT
GTCAAAAACTGGGGGATTGACCATGCTTCAAGCTCAGAGCATCTTGATGAGGGTGGCATT
CTTGGCCCAGGAACTAAGAAGGAAAGAGTTGTTTCAGCTGAAGATGCTGTGAGTATATTT
CACGTCCTTTTGCTGTGTAATTGA

Peptide Sequence

PEP ID

Zm00001d020097_P008
PEP Infomation

pep chromosome:B73_RefGen_v4:7:91751351:91756938:-1 gene:Zm00001d020097 transcript:Zm00001d020097_T008 gene_biotype:protein_coding transcript_biotype:protein_coding description:RING/U-box superfamily protein
Sequence

MAHTSCDGVHHVISVAHGETASTSTSHQDMCSDSDEPHQEDRLSTSTQTLSSESSPSISP
TAYSTRNLSFPRRDSIYGHGRSPWNSGLWISFEIVMYIAQVVAAIVILIFSRHEHPHAPL
FAWIIGYTLGCIASLPLIYWRYVHRNRHLDQEPQQPPTTYPTLTPSQSSEGRNHRTSGIV
LHLGCISISCPRLSVLAYHFKTGVDCFFAVWFVVGNVWIFGGRSISSDAQDAPNMYRLCL
AFLALSCVGYAIPFIMCAAICCCFPCLISVLRLQEDLGQNRGATQELIDALPTYKFKPKR
VKNWGIDHASSSEHLDEGGILGPGTKKERVVSAEDAVSIFHVLLLCN

Transcript Sequence

Transcript ID

Zm00001d020097_T008
Transcript Infomation

cdna chromosome:B73_RefGen_v4:7:91751351:91756938:-1 gene:Zm00001d020097 gene_biotype:protein_coding transcript_biotype:protein_coding description:RING/U-box superfamily protein
Sequence

GCCTCCCCTTCATCCTCCACTTCTTCCTCTTGGTCTGGTTCGGGCAGAGCATCCGCACCT
GCTCGGCCGATTACCCCGGCGTTTTCTGTTCCCTTTCACCCCGCGTGCGGGCGCTATCCT
TCCCGTGGCGACGTCTGGGTGACCGCTGCCGCAGCCCTACACTAGGTTCCTAGGTATTCG
CCGGGCCCTTCCCCGGCGACGAGCACCCACCATCTTAGGCTACCTCTGTGGGGATCTTCT
GTGAAGCAAGAGAAGTTACCTAGCACACAACTCAAAGTTCAGTAGATTATTGAGGATCAA
CATTTCAGCCATCTGTATGTTAGTTAATATGATGGCCGATGGTAACATCTGGTTAGAAAG
ATAGAAACTCATTATTGCGCTACATATGGTAGTGCCCATTCGACATAAGAACTAAGCTGG
ACATTGGTAGATCCAAGTTATTAATGGCGCACACTTCCTGTGATGGTGTACATCATGTTA
TAAGTGTAGCACATGGGGAAACTGCATCAACATCAACCAGTCATCAAGATATGTGCAGTG
ACTCGGATGAACCACATCAGGAAGATAGGCTATCAACAAGCACACAAACCCTGTCATCAG
AGTCTTCGCCATCAATATCACCAACTGCTTATAGCACCAGAAATTTATCTTTTCCTAGAA
GAGATAGTATATATGGTCATGGAAGAAGTCCATGGAATTCTGGTTTATGGATCTCGTTTG
AAATTGTCATGTACATTGCTCAGGTTGTAGCTGCTATTGTCATCCTCATCTTTTCAAGAC
ATGAACATCCCCATGCTCCTTTGTTCGCATGGATAATTGGATATACACTTGGCTGCATTG
CTAGTCTTCCTCTTATTTATTGGCGGTATGTTCATCGAAACAGACATTTGGATCAAGAAC
CTCAGCAGCCACCTACAACATATCCTACTTTGACTCCTTCTCAGTCATCAGAAGGACGCA
ACCATCGTACCAGTGGTATTGTTTTGCATCTTGGATGTATCTCAATTTCTTGCCCAAGGC
TTAGTGTGCTGGCTTATCACTTCAAGACAGGTGTTGACTGTTTCTTTGCTGTATGGTTTG
TTGTTGGCAATGTGTGGATTTTTGGTGGGCGCAGTATTTCATCAGATGCTCAGGACGCTC
CCAATATGTACAGGTTGTGTTTGGCATTCCTTGCGCTTAGTTGTGTTGGATATGCCATTC
CTTTTATAATGTGTGCAGCAATATGCTGCTGCTTTCCATGCTTGATTTCTGTTTTGCGTC
TTCAAGAAGATTTGGGTCAAAATAGAGGAGCTACTCAAGAGCTAATAGATGCATTGCCAA
CCTACAAATTCAAACCAAAACGTGTCAAAAACTGGGGGATTGACCATGCTTCAAGCTCAG
AGCATCTTGATGAGGGTGGCATTCTTGGCCCAGGAACTAAGAAGGAAAGAGTTGTTTCAG
CTGAAGATGCTGTGAGTATATTTCACGTCCTTTTGCTGTGTAATTGAAGGGTTTGCTTTA
GTGATATTCTTTAGATTTATTATCTGTTGTCCACACAAATGAAGCCTACATGATTGTGAA
TTTTTTATGCTGTTTGTAGACATGTTCTCAAGTGATGCAAGGATACTTACTATTATTCTC
AAATCTCAATATAAAACATAAATAGTTTTCTTAAGTGCTCTAAGTGAATGTTTTTTTTGA
GTAATACCATTTACCATAATCGTGGTTGGTTGGGTTCATGACTCAGGATTGCAATTCACT
ACCTACTTTCAAGAGGTAGGCTGCCAGGCTGTTAAGCCGACCAATCCAGCCACATACATC
ACCTGTAATATAGCTACCTGTCAAGCTATTGAGTCTCTGGACTCCCAACTCCACCCACTA
GAGTGTTGCCGCCACCAGATACTCTGGTCATGACCCTCTTCCTTGCCATCTGTGCTTCTC
TGCTCCAGCAGCAGCAAAAGCTATTCTTGTGCTCCTCTGCCCTGCTCTTAGTGCTCCGTG
TGCTGCAGCTTTTCCTCTTGTCCTGAGTTCTCCTGATAGCATTCAAGACAACTGTGGGGA
AAACACTGATGCTGTAACTGCTTTGGAGCTCCTTGGGTAAAACCTCCATCTTCTCACATT
TTGTTCCATTTGAGTTTGCTCCAGCAGTCCAGCTCCATGTACCAACTTGCGTTTTGGTGG
AATCCAGTTTATCACAAACTGTGAATCAGTTCATGAATTCTGGTGACAGTGAGTAATACC
TTGTACTAGTCTGTCCTTGACTCCTTGTATTCTTTTGAAACTGTGATTACCCTGTTATTT
CACATTATTGGTGCTTCTAATCATGAGTACATTTAACGATAGATGTTCATCAATATTTCT
GCACATTACCACTAGCTAAAATGTGAAAGAGATTAAGAGGTTCTTGGATGTCATCTAGTA
GTGGCTACTGCCATTTCTCACTATTCTTTTCTGACCTAAGTAGTAATTTGGTATTTTGTC
TGTGCACATGATAATTAGGGACTAATATTGCAAAATGGGACAGCTTGTTTGCATGTTTCA
ACTCCATTTCAAAGCATTGATATTTATTCAGCAACTGATCACTCTTTTAGAGTAGTCAAT
GTTGTATTCTGGATTTTCTACTTGATCATTTGTTAGTGAGCTCACTCATAGCAGATCTTA
CCTTTAGTTAATACTCCATTCCAAATTATAAGTTGTTCTGGCTTTTTAGATACATAGCTT
TTTCTACGTACCTAAATACATATTATGCCTAGATATATAGTAAAAGTTGTGTATCTAGAA
AAGCCAGAATGACATATTTTGGAACAGGGGGAGTAGTATAGATTCAATCACATAGTTTTT
CCCTCTTCCATAGCATGTTAAATGTAACATCTAATAATATTGATGCAGGTGTGCTGCATC
TGTCTTACGAAGTATGGAGATGATGATGAGCTTCGTGAGCTTCCTTGCACACACTTCTTT
CATGTTCAATGTGTAGATAAATGGCTTAAGATAAATGCGGTGTGCCCACTCTGCAAAACA
GAGATTGGGGGTGTGGTTCGATCTTTCTTTGGCTTGCCATTTGGCCGCCGCCGTGTCGAT
AGGATAGCGGCAAGAGGTGTAGCTAGCTCAAGATTCAGTGTATAGAACAATGCTGTTTTT
CCGCATAAAGAGCTCTGCTCTGTTGCAATGGTTTGATTGATTGTCAAGGAAAGCGCTGTG
TGCATGACTTGAAGACAATGACACCTGGTGGGAGACCTGATGCTTGTAGGGGCAAATTTC
TAAGAAATGTAACGGACTGAAGGTGCTGCTATACTCTGATGAACATTTTTTTTCCAAGTA
TGTAAATAAGGAACACGAAGTTCGCTTGCCAGGTATAATGCAACTTTGCAAGCAACTTCA
CAGGTGCTC