Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d020069_T003
CDS Infomation	cds chromosome:B73_RefGen_v4:7:90084650:90086477:-1 gene:Zm00001d020069 gene_biotype:protein_coding transcript_biotype:protein_coding description:Carotenoid cleavage dioxygenase
Sequence	ATGAAAGCGTCGGCTCCATTCAGCACGAGCCAGCCTCTTTCTTGTCGCACCCATGGCGGT CGGCCGTCGTCCATGTCCATGTCTGCCGGCGCACGGACCGCAACATCAGTGGGCACCAGC TCTAAGAGGCCTTGGTTCGGTGACCTCCTGGGGCGTCTGTCGTCCACGATGGACGGAGCG TCCAGGGCCCTCAAGGATGCGCCGCAGAGGTTTCTCGATGCGCTGGTTGACGCAACCTTC AGATTCACCGATCAAGCTCTGAATTCCGCCGAGAGCAATTTCGCACCGGTCGATGAGACT GGTGAAGCCATAGAGATACACCAGAGCCAGATCCAAGGGGCGATACCGGACGGTTTCCCC GAGGGGGTGTACATCAGAAACGGTGACGGATTCAGTCATTTTCCTCTTCTTGCTCTGTCA GTCTCCATGAGCGAGAGAGAGAGAGAATCTGAACGGCCCGTGAACATTGTTCTAGGTTCC AACCCGCTCTTTGGCGCCCTCCATTCCACGTCCTCGGTCCTGGGACAGTCCAGGGAGATC TGGGTCGAGGGGGAGGGCATGCTCCACGCCGTCTACTTCACCAAAAGCAGCGCGGGTCAT CTATGGTCAGTCTCCTACGCCAGCCGCTACGTGCAGTCCGAGACGCTGGAGCTGGAAACG GCGCGGCACAAACCTTGCTTCCTCCCTGCCGTCGAGGGCGACTCTGCAGCCATCGTCGCC GCCTACGTTTTCAACTATCTTAGGTTTGGCAAGGTGAGCAAGGACATCAGCAACACCAAC GTGTTCGAGCATTCCGGCAGGGTGTTCGCCGTCGCCGAGAACTCTCTGCCCTACGAGATC TGCGTAGGTAGCCTCGACACCAGAGACGCCTGGGACGTTGGTGGGGAATGGGATCGCCCC TTCACGGCTCATCCAAAGGTAGCTCCTGGATCAGGGGAGCTCGTCATCTTTGGAACGGAC GCGAAGAAGCCATTCCTAGTAGTTGGAGTTGTCTCAGCTGATGGAACCAAACTAAAGCAC AGAGCTGACCTCAAGCTGGACAGGTGCACACTTTGTCATGATATAGGAGTCACTCCAAAG CACAATGTAATCATGGACATACCACTTACCATGGACGTCGGTAGAATCGTCAAAGGCGGA CAGTAA

Peptide Sequence

PEP ID	Zm00001d020069_P003
PEP Infomation	pep chromosome:B73_RefGen_v4:7:90084650:90086477:-1 gene:Zm00001d020069 transcript:Zm00001d020069_T003 gene_biotype:protein_coding transcript_biotype:protein_coding description:Carotenoid cleavage dioxygenase
Sequence	MKASAPFSTSQPLSCRTHGGRPSSMSMSAGARTATSVGTSSKRPWFGDLLGRLSSTMDGA SRALKDAPQRFLDALVDATFRFTDQALNSAESNFAPVDETGEAIEIHQSQIQGAIPDGFP EGVYIRNGDGFSHFPLLALSVSMSERERESERPVNIVLGSNPLFGALHSTSSVLGQSREI WVEGEGMLHAVYFTKSSAGHLWSVSYASRYVQSETLELETARHKPCFLPAVEGDSAAIVA AYVFNYLRFGKVSKDISNTNVFEHSGRVFAVAENSLPYEICVGSLDTRDAWDVGGEWDRP FTAHPKVAPGSGELVIFGTDAKKPFLVVGVVSADGTKLKHRADLKLDRCTLCHDIGVTPK HNVIMDIPLTMDVGRIVKGGQ

Transcript Sequence

Transcript ID	Zm00001d020069_T003
Transcript Infomation	cdna chromosome:B73_RefGen_v4:7:90084650:90086477:-1 gene:Zm00001d020069 gene_biotype:protein_coding transcript_biotype:protein_coding description:Carotenoid cleavage dioxygenase
Sequence	CCAACCCTGTGCTCTTCTTCTTGGTTCTTGCGCGACACGACCACGACGACGACGATGAAA GCGTCGGCTCCATTCAGCACGAGCCAGCCTCTTTCTTGTCGCACCCATGGCGGTCGGCCG TCGTCCATGTCCATGTCTGCCGGCGCACGGACCGCAACATCAGTGGGCACCAGCTCTAAG AGGCCTTGGTTCGGTGACCTCCTGGGGCGTCTGTCGTCCACGATGGACGGAGCGTCCAGG GCCCTCAAGGATGCGCCGCAGAGGTTTCTCGATGCGCTGGTTGACGCAACCTTCAGATTC ACCGATCAAGCTCTGAATTCCGCCGAGAGCAATTTCGCACCGGTCGATGAGACTGGTGAA GCCATAGAGATACACCAGAGCCAGATCCAAGGGGCGATACCGGACGGTTTCCCCGAGGGG GTGTACATCAGAAACGGTGACGGATTCAGTCATTTTCCTCTTCTTGCTCTGTCAGTCTCC ATGAGCGAGAGAGAGAGAGAATCTGAACGGCCCGTGAACATTGTTCTAGGTTCCAACCCG CTCTTTGGCGCCCTCCATTCCACGTCCTCGGTCCTGGGACAGTCCAGGGAGATCTGGGTC GAGGGGGAGGGCATGCTCCACGCCGTCTACTTCACCAAAAGCAGCGCGGGTCATCTATGG TCAGTCTCCTACGCCAGCCGCTACGTGCAGTCCGAGACGCTGGAGCTGGAAACGGCGCGG CACAAACCTTGCTTCCTCCCTGCCGTCGAGGGCGACTCTGCAGCCATCGTCGCCGCCTAC GTTTTCAACTATCTTAGGTTTGGCAAGGTGAGCAAGGACATCAGCAACACCAACGTGTTC GAGCATTCCGGCAGGGTGTTCGCCGTCGCCGAGAACTCTCTGCCCTACGAGATCTGCGTA GGTAGCCTCGACACCAGAGACGCCTGGGACGTTGGTGGGGAATGGGATCGCCCCTTCACG GCTCATCCAAAGGTAGCTCCTGGATCAGGGGAGCTCGTCATCTTTGGAACGGACGCGAAG AAGCCATTCCTAGTAGTTGGAGTTGTCTCAGCTGATGGAACCAAACTAAAGCACAGAGCT GACCTCAAGCTGGACAGGTGCACACTTTGTCATGATATAGGAGTCACTCCAAAGCACAAT GTAATCATGGACATACCACTTACCATGGACGTCGGTAGAATCGTCAAAGGCGGACAGTAA