Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d020062_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:7:89573121:89574794:1 gene:Zm00001d020062 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat-containing protein chloroplastic
Sequence	ATGCCTTCCCCGACACTGGGCCACTGGCGCCGCCGCTCACTGCGGGCGACTACCGCCCTG CTGCTTCGTCTCCGCGACGCCGCTGGGCCGACCACGCCGCGCCGCCTGCTCCTCCAATCC ATGGCAGTGGTCCTCACCTCCGGGCTCTCCTTCTCCCACCCCGTGCTCGCCTCCCGCCTA CTCAATTCCCTCCTCCCGCACGTCCCCGCCCGCCGCCTCCCGGCCCTCCTCCGCCTACTC CCACCCGACCACCTCACGCTCCTGCTCCTCTCCTCCGCCAAGCACCACCACGCCCAGTCC CTCCCCGCCGCCTGCGCGCTACATGCCCTCGGTCTGTCCTATGGCCACCTCCCCTCTGAC CTCCGCCTGGCCAACTCCCTCCTCTCGCTCTATCTCTCCCACGGCTCCACAGCCTCCGCG CGCCGCCTCCTCGCCGACATCCCCCGCCCCGACACCGTGACCTGGAACACCCTCCTCCGC TCCTTTCTCCGCATGGGCCTCCTGCCGGCGGCGCGGCGCCTGTTCGACGAAATGCCGGAG CGGGATCTCGTCACGTATAATTCAATGTTATCTGGGTACGCGGCGGAGGGGGATATCGCC AACGCCAGGGAGCTGTTTGATGGAATGCCCGAGAGGGACGTGGTCACATGGAACTCAATG CTTGCTGGGTATGCTCAGCGTGGGGACATGGAGAGCGCCAAGAGGCTGTTTGATGTAATG CCTGTGAGGGATGTTGTGTCTTGGAACTCGATGCTGGATGGCTACGCCCAGACTGGGGAC ATTGAGATGACAAGAATGGTTTTTGATGGCATGCCAAGAAGGAGCACGGTGTCATGGAAT GTTGTTCTTGCGCTATACGCAAAGGTGAAGGACTGGCATGAGTGTTTGAATCTGTTTGAT GCAATGATGGCTGTGGGGGGAAGCAAACCAAATGAGAAGACATTTGTCAGCGTTTTGACA GCCTGTGGGCACCTGGGTGATCTTGAGAGGGGAAGGTGGGTGCATCACTTGGTTCATGAG AGTTGGGAGAGACTTCTTCCTGACGTACTACTTCTTACTGCTATGATGACAATGTATGCC AAGTGTGGGGTGATGGGGACAGCAAAGGAGATATTTGATTTGATGACCGAAAGGAGTGTT GCATCCTGGAACTCAATGATCATCGGCTATGGATTGCATGGGTACAGTGAGAAGGCCCTT GAGTTGTTCATGGAGATGGAGAAGAATGGGCCTCAGCCAAATGAGACGACATTCATCTGC ATCTTGAGCTCCTGTGCCCATGGAGGCTTGGTGCTTGAAGGCTGGTGGTGTTTTGATAGG ATGGTCAGGTTCTACAATATTGAGCCCAAGGCTGAGCACTTTGGCTGTATGATGGACCTC CTTGGTCGTGCTGGACTGCTCAGAGACTCAGAGAATCTCATCAATAATTTGCAGGCAAAG GTGTCACCTGCATTATGGGGTGCACTAATATCAGCCTCTCGAACTCAGGACAGCTCCAAA CTTGGAGAGTTTATTGGAACTAAACTGATCGAAATGAAGCCAACAGAGTTCAGCTCCTAC GTGCTTCTGTCAAACATTTATGCCACGGAAGGAAGATGGGATGATGTCGAAAAAGTAAGG AAGGTGATGAAGGAGAAGGTAGTGGAGAAAGATGTGGGGATGAGCCTTGTATGA

Peptide Sequence

PEP ID	Zm00001d020062_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:7:89573121:89574794:1 gene:Zm00001d020062 transcript:Zm00001d020062_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat-containing protein chloroplastic
Sequence	MPSPTLGHWRRRSLRATTALLLRLRDAAGPTTPRRLLLQSMAVVLTSGLSFSHPVLASRL LNSLLPHVPARRLPALLRLLPPDHLTLLLLSSAKHHHAQSLPAACALHALGLSYGHLPSD LRLANSLLSLYLSHGSTASARRLLADIPRPDTVTWNTLLRSFLRMGLLPAARRLFDEMPE RDLVTYNSMLSGYAAEGDIANARELFDGMPERDVVTWNSMLAGYAQRGDMESAKRLFDVM PVRDVVSWNSMLDGYAQTGDIEMTRMVFDGMPRRSTVSWNVVLALYAKVKDWHECLNLFD AMMAVGGSKPNEKTFVSVLTACGHLGDLERGRWVHHLVHESWERLLPDVLLLTAMMTMYA KCGVMGTAKEIFDLMTERSVASWNSMIIGYGLHGYSEKALELFMEMEKNGPQPNETTFIC ILSSCAHGGLVLEGWWCFDRMVRFYNIEPKAEHFGCMMDLLGRAGLLRDSENLINNLQAK VSPALWGALISASRTQDSSKLGEFIGTKLIEMKPTEFSSYVLLSNIYATEGRWDDVEKVR KVMKEKVVEKDVGMSLV

Transcript Sequence

Transcript ID	Zm00001d020062_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:7:89573121:89574794:1 gene:Zm00001d020062 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat-containing protein chloroplastic
Sequence	ATGCCTTCCCCGACACTGGGCCACTGGCGCCGCCGCTCACTGCGGGCGACTACCGCCCTG CTGCTTCGTCTCCGCGACGCCGCTGGGCCGACCACGCCGCGCCGCCTGCTCCTCCAATCC ATGGCAGTGGTCCTCACCTCCGGGCTCTCCTTCTCCCACCCCGTGCTCGCCTCCCGCCTA CTCAATTCCCTCCTCCCGCACGTCCCCGCCCGCCGCCTCCCGGCCCTCCTCCGCCTACTC CCACCCGACCACCTCACGCTCCTGCTCCTCTCCTCCGCCAAGCACCACCACGCCCAGTCC CTCCCCGCCGCCTGCGCGCTACATGCCCTCGGTCTGTCCTATGGCCACCTCCCCTCTGAC CTCCGCCTGGCCAACTCCCTCCTCTCGCTCTATCTCTCCCACGGCTCCACAGCCTCCGCG CGCCGCCTCCTCGCCGACATCCCCCGCCCCGACACCGTGACCTGGAACACCCTCCTCCGC TCCTTTCTCCGCATGGGCCTCCTGCCGGCGGCGCGGCGCCTGTTCGACGAAATGCCGGAG CGGGATCTCGTCACGTATAATTCAATGTTATCTGGGTACGCGGCGGAGGGGGATATCGCC AACGCCAGGGAGCTGTTTGATGGAATGCCCGAGAGGGACGTGGTCACATGGAACTCAATG CTTGCTGGGTATGCTCAGCGTGGGGACATGGAGAGCGCCAAGAGGCTGTTTGATGTAATG CCTGTGAGGGATGTTGTGTCTTGGAACTCGATGCTGGATGGCTACGCCCAGACTGGGGAC ATTGAGATGACAAGAATGGTTTTTGATGGCATGCCAAGAAGGAGCACGGTGTCATGGAAT GTTGTTCTTGCGCTATACGCAAAGGTGAAGGACTGGCATGAGTGTTTGAATCTGTTTGAT GCAATGATGGCTGTGGGGGGAAGCAAACCAAATGAGAAGACATTTGTCAGCGTTTTGACA GCCTGTGGGCACCTGGGTGATCTTGAGAGGGGAAGGTGGGTGCATCACTTGGTTCATGAG AGTTGGGAGAGACTTCTTCCTGACGTACTACTTCTTACTGCTATGATGACAATGTATGCC AAGTGTGGGGTGATGGGGACAGCAAAGGAGATATTTGATTTGATGACCGAAAGGAGTGTT GCATCCTGGAACTCAATGATCATCGGCTATGGATTGCATGGGTACAGTGAGAAGGCCCTT GAGTTGTTCATGGAGATGGAGAAGAATGGGCCTCAGCCAAATGAGACGACATTCATCTGC ATCTTGAGCTCCTGTGCCCATGGAGGCTTGGTGCTTGAAGGCTGGTGGTGTTTTGATAGG ATGGTCAGGTTCTACAATATTGAGCCCAAGGCTGAGCACTTTGGCTGTATGATGGACCTC CTTGGTCGTGCTGGACTGCTCAGAGACTCAGAGAATCTCATCAATAATTTGCAGGCAAAG GTGTCACCTGCATTATGGGGTGCACTAATATCAGCCTCTCGAACTCAGGACAGCTCCAAA CTTGGAGAGTTTATTGGAACTAAACTGATCGAAATGAAGCCAACAGAGTTCAGCTCCTAC GTGCTTCTGTCAAACATTTATGCCACGGAAGGAAGATGGGATGATGTCGAAAAAGTAAGG AAGGTGATGAAGGAGAAGGTAGTGGAGAAAGATGTGGGGATGAGCCTTGTATGA