Plant GARDEN
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d020057_T006
CDS Infomation

cds chromosome:B73_RefGen_v4:7:89268084:89273462:-1 gene:Zm00001d020057 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:phosphoenolpyruvate carboxylase4 description: phosphoenolpyruvate carboxylase3
Sequence

ATGGCTGCCTTAGGGGCGAAGATGGAGCGTCTGTCGTCGATCGACGCGCAGCTGCGGATG
CTGGTGCCGGGGAAGGTTTCGGAGGACGATAAGCTCATCGAGTACGACGCTCTCCTCCTC
GATCGGTTCCTCGACATCCTTCAGGACCTCCATGGCGACGACCTCAAGGAAATGGTTCAA
GAATGCTATGAGGTAGCTGCTGAGTATGAAACAAAACATGACTTGCAAAAGCTTGATGAA
CTCGGGAAGATGATAACAAGCTTGGATCCTGGGGACTCTATCGTGATTGCTAAGTCTTTC
TCGCACATGCTTAACTTGGCCAACTTGGCTGAGGAAGTCCAGATAGCCTACAGGAGGAGA
ATCAAGCTCAAGAAGGGAGACTTTGCTGATGAGAACTCGGCAATCACAGAATCTGACATT
GAGGAAACACTTAAGAGGCTTGTTGTTGACCTGAAGAAGTCACCTGCTGAGGTATTTGAT
GCCCTCAAGAGCCAGACTGTTGATCTGGTTTTGACTGCACATCCAACACAGTCTGTGAGG
AGGTCACTGCTCCAGAAACACTCGAGGATACGCAACTGTTTGGTTCAACTCTACTCAAAA
GATATCACTCCGGATGATAAGCAGGAACTTGATGAGGCTCTGCAAAGAGAGATCCAAGCT
GCCTTTAGAACTGATGAGATCCGAAGAACACAGCCCACTCCCCAAGATGAAATGCGTGCT
GGTATGAGCTACTTCCACGAAACAATTTGGAAGGGTGTTCCAAAGTTCTTGCGCCGGGTT
GATACTGCATTGAAGAACATTGGGATTAACGAGCGTGTTCCTTACAATGCACCTCTTATT
CAATTCTCTTCTTGGATGGGGGGAGATCGTGATGGAAATCCAAGAGTGACACCAGAGGTT
ACCAGGGATGTCTGCTTGCTTGCCAGAATGATGGCATCAAACTTGTACTGCTCTCAGATT
GAGGATCTCATGTTTGAGTTGTCTATGTGGCGATGCAGTGATGAACTGCGCATGCGAGCT
GATGTGCTGCATCTCTCCACTAAGAAGGATGCCAAACATTACATAGAGTTTTGGAAGAAG
GTTCCTCCAAATGAGCCATATCGGGTGATACTGAGTGATGTCAGGGATAAACTGTACAAC
ACTCGTGAACGGTCACGAGAGCTTTTATCCAGTGGGCATTCTGATATTCCTGAGGAAGCT
ACATTGACAAATGTTGAGCAGCTGTTGGAGCCCTTGGAACTATGTTACAGATCACTCTGT
GCTTGTGGTGACTCTGTAATTGCTGATGGAACCCTTCTGGATTTCTTGCGTCAAGTGTCC
ACCTTTGGACTCTCCCTTGTGAGGCTTGACATTAGGCAAGAGTCAGATAGGCATACTGAT
GTCCTTGATGCCATCACTACATACCTGCCACCAGACACGATCCACGGATCACTCAGGGTC
ACTGTGCAAGGTGAAGTCATTGAACAGTCATTTGGTGAGGAGCACTTGTGCTTTAGGACA
CTGCAACGTTTCACGGCTGCTACCCTGGAGCATGGCATGCACCCACCAAATGCACCAAAG
CCAGAATGGCGAGCCCTTCTTGATGAGATGGCAGTTGTGGCAACTGAGGAATATCGGTCC
ATTGTCTTCAAAGAGCCACGCTTTGTCGAGTATTTCCGCCTTGCAACCCCTGAAACAGAG
TATGGTAGGATGAACATAGGAAGCAGGCCATCCAAGAGAAAGCCGAGCGGAGGTATCGAC
TCACTCCGAGCAATCCCATGGATCTTTGCTTGGACACAAACGCGGTTCCACCTCCCGGTC
TGGCTAGGATTTGGAGCCGCATTCAAGAATGTCCTCCAGAAGGACATCAGGAACCTCCAC
ATGCTCCAGGAAATGTACAATGAGTGGCCATTTTTCAGGGTGACTATTGATCTGGTGGAG
ATGGTGTTCGCCAAGGGTAATCCTGGCATTGCCGCACTGTATGACAAACTCCTCGTTTCA
GAGGAACTGCATCCATTGGGTGAGAAGCTGAGGGCCAACTATGAGGAAACCCAGAAGCTT
CTACTTCAGGTTGCTGGGCACAGGGATCTTCTGGAAGGTGACCTCTACCTGAAGCAGCGG
CTCCGCCTGCGTGATGCGTACATCACCACCCTGAACGTCTGCCAGGCCTACACCCTGAAG
CGGATCCGTGACCCGGACTACCATGTCGCGCTGCGCCCCCACCTCTCCAAGGAGATCATG
GACTCGACCAAGGCTGCGGCGGAGCTGGTGAAGCTGAACCCTGGCAGCGAATACGCACCG
GGGCTGGAGGACACCCTCATCCTGACCATGAAGGGCATAGCAGCCGGCCTCCAGAACACC
GGTTAA

Peptide Sequence

PEP ID

Zm00001d020057_P006
PEP Infomation

pep chromosome:B73_RefGen_v4:7:89268084:89273462:-1 gene:Zm00001d020057 transcript:Zm00001d020057_T006 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:phosphoenolpyruvate carboxylase4 description: phosphoenolpyruvate carboxylase3
Sequence

MAALGAKMERLSSIDAQLRMLVPGKVSEDDKLIEYDALLLDRFLDILQDLHGDDLKEMVQ
ECYEVAAEYETKHDLQKLDELGKMITSLDPGDSIVIAKSFSHMLNLANLAEEVQIAYRRR
IKLKKGDFADENSAITESDIEETLKRLVVDLKKSPAEVFDALKSQTVDLVLTAHPTQSVR
RSLLQKHSRIRNCLVQLYSKDITPDDKQELDEALQREIQAAFRTDEIRRTQPTPQDEMRA
GMSYFHETIWKGVPKFLRRVDTALKNIGINERVPYNAPLIQFSSWMGGDRDGNPRVTPEV
TRDVCLLARMMASNLYCSQIEDLMFELSMWRCSDELRMRADVLHLSTKKDAKHYIEFWKK
VPPNEPYRVILSDVRDKLYNTRERSRELLSSGHSDIPEEATLTNVEQLLEPLELCYRSLC
ACGDSVIADGTLLDFLRQVSTFGLSLVRLDIRQESDRHTDVLDAITTYLPPDTIHGSLRV
TVQGEVIEQSFGEEHLCFRTLQRFTAATLEHGMHPPNAPKPEWRALLDEMAVVATEEYRS
IVFKEPRFVEYFRLATPETEYGRMNIGSRPSKRKPSGGIDSLRAIPWIFAWTQTRFHLPV
WLGFGAAFKNVLQKDIRNLHMLQEMYNEWPFFRVTIDLVEMVFAKGNPGIAALYDKLLVS
EELHPLGEKLRANYEETQKLLLQVAGHRDLLEGDLYLKQRLRLRDAYITTLNVCQAYTLK
RIRDPDYHVALRPHLSKEIMDSTKAAAELVKLNPGSEYAPGLEDTLILTMKGIAAGLQNT
G

Transcript Sequence

Transcript ID

Zm00001d020057_T006
Transcript Infomation

cdna chromosome:B73_RefGen_v4:7:89268084:89273462:-1 gene:Zm00001d020057 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:phosphoenolpyruvate carboxylase4 description: phosphoenolpyruvate carboxylase3
Sequence

ACTAAAGTACTACTCTGCCCTCTCCTGGCTCCTCTCCTTCCTGCTTGGTTTTTGCTTTCA
GCTCTTGAACCGAATCCACTGCCGCGGCGCTTAGCATTGGGGACTAGGGGGCCGACATGG
CTGCCTTAGGGGCGAAGATGGAGCGTCTGTCGTCGATCGACGCGCAGCTGCGGATGCTGG
TGCCGGGGAAGGTTTCGGAGGACGATAAGCTCATCGAGTACGACGCTCTCCTCCTCGATC
GGTTCCTCGACATCCTTCAGGACCTCCATGGCGACGACCTCAAGGAAATGGTTCAAGAAT
GCTATGAGGTAGCTGCTGAGTATGAAACAAAACATGACTTGCAAAAGCTTGATGAACTCG
GGAAGATGATAACAAGCTTGGATCCTGGGGACTCTATCGTGATTGCTAAGTCTTTCTCGC
ACATGCTTAACTTGGCCAACTTGGCTGAGGAAGTCCAGATAGCCTACAGGAGGAGAATCA
AGCTCAAGAAGGGAGACTTTGCTGATGAGAACTCGGCAATCACAGAATCTGACATTGAGG
AAACACTTAAGAGGCTTGTTGTTGACCTGAAGAAGTCACCTGCTGAGGTATTTGATGCCC
TCAAGAGCCAGACTGTTGATCTGGTTTTGACTGCACATCCAACACAGTCTGTGAGGAGGT
CACTGCTCCAGAAACACTCGAGGATACGCAACTGTTTGGTTCAACTCTACTCAAAAGATA
TCACTCCGGATGATAAGCAGGAACTTGATGAGGCTCTGCAAAGAGAGATCCAAGCTGCCT
TTAGAACTGATGAGATCCGAAGAACACAGCCCACTCCCCAAGATGAAATGCGTGCTGGTA
TGAGCTACTTCCACGAAACAATTTGGAAGGGTGTTCCAAAGTTCTTGCGCCGGGTTGATA
CTGCATTGAAGAACATTGGGATTAACGAGCGTGTTCCTTACAATGCACCTCTTATTCAAT
TCTCTTCTTGGATGGGGGGAGATCGTGATGGAAATCCAAGAGTGACACCAGAGGTTACCA
GGGATGTCTGCTTGCTTGCCAGAATGATGGCATCAAACTTGTACTGCTCTCAGATTGAGG
ATCTCATGTTTGAGTTGTCTATGTGGCGATGCAGTGATGAACTGCGCATGCGAGCTGATG
TGCTGCATCTCTCCACTAAGAAGGATGCCAAACATTACATAGAGTTTTGGAAGAAGGTTC
CTCCAAATGAGCCATATCGGGTGATACTGAGTGATGTCAGGGATAAACTGTACAACACTC
GTGAACGGTCACGAGAGCTTTTATCCAGTGGGCATTCTGATATTCCTGAGGAAGCTACAT
TGACAAATGTTGAGCAGCTGTTGGAGCCCTTGGAACTATGTTACAGATCACTCTGTGCTT
GTGGTGACTCTGTAATTGCTGATGGAACCCTTCTGGATTTCTTGCGTCAAGTGTCCACCT
TTGGACTCTCCCTTGTGAGGCTTGACATTAGGCAAGAGTCAGATAGGCATACTGATGTCC
TTGATGCCATCACTACATACCTGCCACCAGACACGATCCACGGATCACTCAGGGTCACTG
TGCAAGGTGAAGTCATTGAACAGTCATTTGGTGAGGAGCACTTGTGCTTTAGGACACTGC
AACGTTTCACGGCTGCTACCCTGGAGCATGGCATGCACCCACCAAATGCACCAAAGCCAG
AATGGCGAGCCCTTCTTGATGAGATGGCAGTTGTGGCAACTGAGGAATATCGGTCCATTG
TCTTCAAAGAGCCACGCTTTGTCGAGTATTTCCGCCTTGCAACCCCTGAAACAGAGTATG
GTAGGATGAACATAGGAAGCAGGCCATCCAAGAGAAAGCCGAGCGGAGGTATCGACTCAC
TCCGAGCAATCCCATGGATCTTTGCTTGGACACAAACGCGGTTCCACCTCCCGGTCTGGC
TAGGATTTGGAGCCGCATTCAAGAATGTCCTCCAGAAGGACATCAGGAACCTCCACATGC
TCCAGGAAATGTACAATGAGTGGCCATTTTTCAGGGTGACTATTGATCTGGTGGAGATGG
TGTTCGCCAAGGGTAATCCTGGCATTGCCGCACTGTATGACAAACTCCTCGTTTCAGAGG
AACTGCATCCATTGGGTGAGAAGCTGAGGGCCAACTATGAGGAAACCCAGAAGCTTCTAC
TTCAGGTTGCTGGGCACAGGGATCTTCTGGAAGGTGACCTCTACCTGAAGCAGCGGCTCC
GCCTGCGTGATGCGTACATCACCACCCTGAACGTCTGCCAGGCCTACACCCTGAAGCGGA
TCCGTGACCCGGACTACCATGTCGCGCTGCGCCCCCACCTCTCCAAGGAGATCATGGACT
CGACCAAGGCTGCGGCGGAGCTGGTGAAGCTGAACCCTGGCAGCGAATACGCACCGGGGC
TGGAGGACACCCTCATCCTGACCATGAAGGGCATAGCAGCCGGCCTCCAGAACACCGGTT
AAACCACGAAGAGGGGATCTTTTTTCTCCTCCTGATCATTGGCTCTAGGTCCTTCGTATT
TTCGCGGATTGTAACTTCGGCCACCTCTCTACACCGTGAGGAAATAATGGTGGTTTCTGC
AAAAGTGGTGGTAAATAAAAGGGCGACAACTATCTTGTTT