Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d020046_T009
CDS Infomation	cds chromosome:B73_RefGen_v4:7:88533032:88549660:-1 gene:Zm00001d020046 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Homeobox-transcription factor 55 description:Protein SAWADEE HOMEODOMAIN HOMOLOG 2
Sequence	ATGGGTCGTCCGCCGAGCACCACTGGTGCTCCGGCCTTCCGCTTCCTCCCTTCCGAGGTG GCGGAGATGGAGGCGCGCTTGCTGCAGCTCAACAACGGCATCCCCACCCGCGCCATGCTC CAGACTCTCGCCGATAAGTTCTCCGCCTCGCCCGAGCGCGCCGGCAAGGTGGCCATCCAG CCCAAGCAGGTGTGGAACTGGTTTCAGAACAGGCGTTACTCGCATCGGGCCAAGACCACC AGGGTCGTGCCGTCTCCACCGGCTAAGATGACCCCCTCGGGGGCCGATCACCACCAGCAC GCCGCTAACGCCTCCGCCTTCAGGGCCGCTCAGCCCTCTTCTGTCGCTGTTGCTCACCAT GGCTCCTCCTCGACAGGGAAGAACCCTATGGAAGGTGTCTCAGTTGAGTTTGAGGCCAAG TCAGCTCGTGATGGTGCATGGTATGATGTTGCTGCCTTTCTGTCACATAGGTTGTTTGAA TCCGGTGACCCGGAAGTGCGGGTTCGTTTTTCTGGATTTGGGGCAGAGGAGGATGAATGG ATCAATGTTCGCAAATGTGTGCGACAACGTTCTCTTCCATGCGAGGCCACAGAATGCGTT GCTGTGCTTCCTGGGGACCTCATTCTTTGTTTTCAGGAAGATAAAGAGCAGGCTCTCTAT TTTGATGCTCGTGTCCTTGATGCTCAAAGGAGAAGGCATGATGTTAGAGGTTGCCGTTGT AGATTTCTTGTTCGCTATGATCATGACTCTTCTGAGGAAATTGTTCCACTGAGGAAGGTG TGCCGCCGACCAGAAACTGACTACAGGCTTCAGATTCTGCATGCTGCTAGAGCGGCAGCC GCCAGTGCAGATATTCACACTCCACCCAGAGAGGCTAAAGTGGAGTTGGCATCCAATGCT AAGAGCCCATATGAGCAAAAACCCCAGAAGCAGTACAAGATGATGGACGTGAACACTGAT GAGGAGGTGACCATGGTCTCCACCTTGGAACAGGATGAGACACAAGGCAAGACTGTAGCC CCCGTACCGTCAGCAACTGCAGAAACCCGCAATTCAAGTTCAGACGCGGTGATGAAGGAT GCGGAGGCTTCGTCCGTGGCTCAAGACGATGATGAAGTGCAGGTGGTTGACAAGATGAAA GAGGGGTAG

Peptide Sequence

PEP ID	Zm00001d020046_P009
PEP Infomation	pep chromosome:B73_RefGen_v4:7:88533032:88549660:-1 gene:Zm00001d020046 transcript:Zm00001d020046_T009 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Homeobox-transcription factor 55 description:Protein SAWADEE HOMEODOMAIN HOMOLOG 2
Sequence	MGRPPSTTGAPAFRFLPSEVAEMEARLLQLNNGIPTRAMLQTLADKFSASPERAGKVAIQ PKQVWNWFQNRRYSHRAKTTRVVPSPPAKMTPSGADHHQHAANASAFRAAQPSSVAVAHH GSSSTGKNPMEGVSVEFEAKSARDGAWYDVAAFLSHRLFESGDPEVRVRFSGFGAEEDEW INVRKCVRQRSLPCEATECVAVLPGDLILCFQEDKEQALYFDARVLDAQRRRHDVRGCRC RFLVRYDHDSSEEIVPLRKVCRRPETDYRLQILHAARAAAASADIHTPPREAKVELASNA KSPYEQKPQKQYKMMDVNTDEEVTMVSTLEQDETQGKTVAPVPSATAETRNSSSDAVMKD AEASSVAQDDDEVQVVDKMKEG

Transcript Sequence

Transcript ID	Zm00001d020046_T009
Transcript Infomation	cdna chromosome:B73_RefGen_v4:7:88533032:88549660:-1 gene:Zm00001d020046 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Homeobox-transcription factor 55 description:Protein SAWADEE HOMEODOMAIN HOMOLOG 2
Sequence	AAACACGCCCGGGTGCGTGCGTGGCCTACACCGTTGAGCCGGAGCCGGAACCGGTTGCCT GCCCGGAGCCATGAACGCCTACCTCCACTAACTCACACTTCTCCTAAAGTTTCCCCACCC CCGTCCGCCGATCCACCACCGATCTGGTCTCACTGCATCCTCCTCCCCTCGCCGTCCAAG AGCGCCGGTCCGATGGGTCGTCCGCCGAGCACCACTGGTGCTCCGGCCTTCCGCTTCCTC CCTTCCGAGGTGGCGGAGATGGAGGCGCGCTTGCTGCAGCTCAACAACGGCATCCCCACC CGCGCCATGCTCCAGACTCTCGCCGATAAGTTCTCCGCCTCGCCCGAGCGCGCCGGCAAG GTGGCCATCCAGCCCAAGCAGGTGTGGAACTGGTTTCAGAACAGGCGTTACTCGCATCGG GCCAAGACCACCAGGGTCGTGCCGTCTCCACCGGCTAAGATGACCCCCTCGGGGGCCGAT CACCACCAGCACGCCGCTAACGCCTCCGCCTTCAGGGCCGCTCAGCCCTCTTCTGTCGCT GTTGCTCACCATGGCTCCTCCTCGACAGGGAAGAACCCTATGGAAGGTGTCTCAGTTGAG TTTGAGGCCAAGTCAGCTCGTGATGGTGCATGGTATGATGTTGCTGCCTTTCTGTCACAT AGGTTGTTTGAATCCGGTGACCCGGAAGTGCGGGTTCGTTTTTCTGGATTTGGGGCAGAG GAGGATGAATGGATCAATGTTCGCAAATGTGTGCGACAACGTTCTCTTCCATGCGAGGCC ACAGAATGCGTTGCTGTGCTTCCTGGGGACCTCATTCTTTGTTTTCAGGAAGATAAAGAG CAGGCTCTCTATTTTGATGCTCGTGTCCTTGATGCTCAAAGGAGAAGGCATGATGTTAGA GGTTGCCGTTGTAGATTTCTTGTTCGCTATGATCATGACTCTTCTGAGGAAATTGTTCCA CTGAGGAAGGTGTGCCGCCGACCAGAAACTGACTACAGGCTTCAGATTCTGCATGCTGCT AGAGCGGCAGCCGCCAGTGCAGATATTCACACTCCACCCAGAGAGGCTAAAGTGGAGTTG GCATCCAATGCTAAGAGCCCATATGAGCAAAAACCCCAGAAGCAGTACAAGATGATGGAC GTGAACACTGATGAGGAGGTGACCATGGTCTCCACCTTGGAACAGGATGAGACACAAGGC AAGACTGTAGCCCCCGTACCGTCAGCAACTGCAGAAACCCGCAATTCAAGTTCAGACGCG GTGATGAAGGATGCGGAGGCTTCGTCCGTGGCTCAAGACGATGATGAAGTGCAGGTGGTT GACAAGATGAAAGAGGGGTAGCTTTTTTTCGCACTTTTTGTGTTTGGAGGACTTGATGTT GTCGTACAGAGTTTTCTAATTTAGTTTGTAGTATATGTTTTTCTAATTAAGTACTCCTTC CATTCTTTTTTATTTGTTATGGTTTAGTTTAGAAATGAACTAACGCTCGTTCTTTTTTAT TTGTCACGTTAGTTTAAAAATGAACTAGCGGACGACAAGTATTGAGAACGGAGGTAATAC AGTACTTGTCGTAATTACCGTGTGGC